| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586147
Identifier: 188586147
GI number: 188586147
Start: 1603841
End: 1605172
Strand: Reverse
Name: 188586147
Synonym: Nther_1524
Alternate gene names: NA
Gene position: 1605172-1603841 (Counterclockwise)
Preceding gene: 188586148
Following gene: 188586146
Centisome position: 50.71
GC content: 28.98
Gene sequence:
>1332_bases GTGAAAATCAGAAAAAGAGACTCCACAGCTATATTAAAATCTCTATCTGCAGGAGTAGTTCCAAATAGAGGATTACAGTA TATTATTATCGGAAGAGAAAAGGAAATGAAACAAATAGAACTTGATTTAGATGAAGTAAGTAATGGAAACTCATTGATTA AATTTTTTATAGGTGATTTTGGAACTGGTAAAAGTTTTATGCAAGCTTATATTAAACAAGTAGGCTTAAAGGAAAACTTT GTAGTAGCACAAGCCGATTTCAGTCCTGATCGTCGCTTATATGGAAACGATGGTCAAGCTCTTGCTTTATATAATGAATT GATGAAAAATTTATCAACTAAAAGTGCTCCAGAAGGAAATGCATTAACAAATATTTTAGATCAATGGATATTTAATATAC AAGAACAAGTAGTTGAAGCTAGAGGTTATGAAAAGATAGATTTAGAAAATAAAGATTTTAATAGAGATGTTGAAACAAAA ATAGAACATATCGTTTCCAACATGGATGAATTAACAGGAGGTTATGACTTTGCTAGGGTATTAAATATTTACTATCGTAG TTTTATTGAAAAAAATCAAGATCAAAAAAGAGCTGTTTTACGTTGGATTAGAGGAGAATATACAACTAAAACAGATGCAA AAAATGACTTAGGTATTAGAGAAATAATAAATGATGACAATTATTATGGTTATCTAAAGGTGATAGCCAAATTTGTCAAC CAAATTGGATATTCGGGTTTGGTTATTAATCTTGATGAAGCAGTAAACCTATATAAAATTACTCACTCATTAGCAAGAAA TAAGAATTATGAAATGATTTTAACTATTTATAATGATATATTTCAAGGAGATGTAGAAAATTTATATATCACATTCAGTG GAACACCAGAATTTTTAGAAGATGAGAGGCGTGGTATATATAGCTATAGAGCTCTGCAAAGAAGATTAAGACCTGGTTTT CAAGATGCAGAATTTCAAGATTTGAAAGAACCAGTTATCAAATTGAAACCTATATCTGCAAATGAAACTTTAGCTTTACT AATGAACTTAAGAGATATTCATGCAGCACATTACAAATACAATCCCATAGTTTCAGATGAAGAAATCAAGAATTATCTAA ATAAATATTACGAAATGCCAGGTGCAGAAAAATATGTGATTATAGGTGATATTATCAAAGGATTTATTAGCAGGTTAAAT ATTTTATATGAAAATCCAAACATAGATAGGGCTAAACTATTTGGCGAAATTAATATGGAAACTTCTCAAGAAACTTCAAT GACTAATCAAACTACTGATTTGAATAACCGTTTTAAAAAAGAAAGCTATTAG
Upstream 100 bases:
>100_bases AAATACTAGGAGATGTGATTCTTGAGCAAAGAGGAGAGCATTTTATAATTAACGAAGATTTTGAAGAGTTAGTAGAAACT CTCAAAGAGGAGGAAGAATA
Downstream 100 bases:
>100_bases GAGGTTAAGGCTTGAGCGAGACATTTTATTTATTGTCTGAAAGAATGCAAAAGAAAATATGGGAAATGGGTTGGGATGAA TTCACTCCTGTTCAAGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MKIRKRDSTAILKSLSAGVVPNRGLQYIIIGREKEMKQIELDLDEVSNGNSLIKFFIGDFGTGKSFMQAYIKQVGLKENF VVAQADFSPDRRLYGNDGQALALYNELMKNLSTKSAPEGNALTNILDQWIFNIQEQVVEARGYEKIDLENKDFNRDVETK IEHIVSNMDELTGGYDFARVLNIYYRSFIEKNQDQKRAVLRWIRGEYTTKTDAKNDLGIREIINDDNYYGYLKVIAKFVN QIGYSGLVINLDEAVNLYKITHSLARNKNYEMILTIYNDIFQGDVENLYITFSGTPEFLEDERRGIYSYRALQRRLRPGF QDAEFQDLKEPVIKLKPISANETLALLMNLRDIHAAHYKYNPIVSDEEIKNYLNKYYEMPGAEKYVIIGDIIKGFISRLN ILYENPNIDRAKLFGEINMETSQETSMTNQTTDLNNRFKKESY
Sequences:
>Translated_443_residues MKIRKRDSTAILKSLSAGVVPNRGLQYIIIGREKEMKQIELDLDEVSNGNSLIKFFIGDFGTGKSFMQAYIKQVGLKENF VVAQADFSPDRRLYGNDGQALALYNELMKNLSTKSAPEGNALTNILDQWIFNIQEQVVEARGYEKIDLENKDFNRDVETK IEHIVSNMDELTGGYDFARVLNIYYRSFIEKNQDQKRAVLRWIRGEYTTKTDAKNDLGIREIINDDNYYGYLKVIAKFVN QIGYSGLVINLDEAVNLYKITHSLARNKNYEMILTIYNDIFQGDVENLYITFSGTPEFLEDERRGIYSYRALQRRLRPGF QDAEFQDLKEPVIKLKPISANETLALLMNLRDIHAAHYKYNPIVSDEEIKNYLNKYYEMPGAEKYVIIGDIIKGFISRLN ILYENPNIDRAKLFGEINMETSQETSMTNQTTDLNNRFKKESY >Mature_443_residues MKIRKRDSTAILKSLSAGVVPNRGLQYIIIGREKEMKQIELDLDEVSNGNSLIKFFIGDFGTGKSFMQAYIKQVGLKENF VVAQADFSPDRRLYGNDGQALALYNELMKNLSTKSAPEGNALTNILDQWIFNIQEQVVEARGYEKIDLENKDFNRDVETK IEHIVSNMDELTGGYDFARVLNIYYRSFIEKNQDQKRAVLRWIRGEYTTKTDAKNDLGIREIINDDNYYGYLKVIAKFVN QIGYSGLVINLDEAVNLYKITHSLARNKNYEMILTIYNDIFQGDVENLYITFSGTPEFLEDERRGIYSYRALQRRLRPGF QDAEFQDLKEPVIKLKPISANETLALLMNLRDIHAAHYKYNPIVSDEEIKNYLNKYYEMPGAEKYVIIGDIIKGFISRLN ILYENPNIDRAKLFGEINMETSQETSMTNQTTDLNNRFKKESY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51315; Mature: 51315
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRKRDSTAILKSLSAGVVPNRGLQYIIIGREKEMKQIELDLDEVSNGNSLIKFFIGDF CCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHCCHHHCCCCCCEEEEEECCC GTGKSFMQAYIKQVGLKENFVVAQADFSPDRRLYGNDGQALALYNELMKNLSTKSAPEGN CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCH ALTNILDQWIFNIQEQVVEARGYEKIDLENKDFNRDVETKIEHIVSNMDELTGGYDFARV HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH LNIYYRSFIEKNQDQKRAVLRWIRGEYTTKTDAKNDLGIREIINDDNYYGYLKVIAKFVN HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH QIGYSGLVINLDEAVNLYKITHSLARNKNYEMILTIYNDIFQGDVENLYITFSGTPEFLE HCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCEEEEEECCCHHHHH DERRGIYSYRALQRRLRPGFQDAEFQDLKEPVIKLKPISANETLALLMNLRDIHAAHYKY HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHEEC NPIVSDEEIKNYLNKYYEMPGAEKYVIIGDIIKGFISRLNILYENPNIDRAKLFGEINME CCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHEEECCCCCCHHHHEEECCCC TSQETSMTNQTTDLNNRFKKESY CCCHHHCCCCCCCHHHHHHCCCC >Mature Secondary Structure MKIRKRDSTAILKSLSAGVVPNRGLQYIIIGREKEMKQIELDLDEVSNGNSLIKFFIGDF CCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHCCHHHCCCCCCEEEEEECCC GTGKSFMQAYIKQVGLKENFVVAQADFSPDRRLYGNDGQALALYNELMKNLSTKSAPEGN CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCH ALTNILDQWIFNIQEQVVEARGYEKIDLENKDFNRDVETKIEHIVSNMDELTGGYDFARV HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH LNIYYRSFIEKNQDQKRAVLRWIRGEYTTKTDAKNDLGIREIINDDNYYGYLKVIAKFVN HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH QIGYSGLVINLDEAVNLYKITHSLARNKNYEMILTIYNDIFQGDVENLYITFSGTPEFLE HCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCEEEEEECCCHHHHH DERRGIYSYRALQRRLRPGFQDAEFQDLKEPVIKLKPISANETLALLMNLRDIHAAHYKY HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHEEC NPIVSDEEIKNYLNKYYEMPGAEKYVIIGDIIKGFISRLNILYENPNIDRAKLFGEINME CCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHEEECCCCCCHHHHEEECCCC TSQETSMTNQTTDLNNRFKKESY CCCHHHCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA