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The map label for this gene is 188586107

Identifier: 188586107

GI number: 188586107

Start: 1553926

End: 1554147

Strand: Direct

Name: 188586107

Synonym: Nther_1481

Alternate gene names: NA

Gene position: 1553926-1554147 (Clockwise)

Preceding gene: 188586106

Following gene: 188586108

Centisome position: 49.09

GC content: 38.29

Gene sequence:

>222_bases
ATGTCAAAGAAGACTGCCGAGCCTGTTAAAGTCGCTCCCAAATGGTGTAAAGGCTGCGGTATATGTATTGAATTTTGTCC
TAAAAAAGTTTTGGATTACGATGACAAAGGCAAGGTTAAAGTAACAAAACCAGAAGAATGTATCAAATGCGGCTTATGTG
AACTTCGTTGTCCTGATTTTGCCATAGTTGTTAAGAAGGAGGATGAGTCGGATGAAAAATAA

Upstream 100 bases:

>100_bases
AGATAACGGAGGTGATATTTAGACCAGATCAGGCTTCATTAAATCTCTTGAAAAGTACACTAGTTGATTTAAAACAAAAA
GTTAGTTAGGGGTGAATGCT

Downstream 100 bases:

>100_bases
TCAAGCAGTATTAATGCAGGGGAATGAAGCTTGTGTAAAGGGTGCTCTCAGAGCGGGAGCAACTTTTTATGCAGGATATC
CTATCACTCCCTCATCAGAA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: succinyl-CoA; CO2; reduced ferredoxin

Alternate protein names: Ferridoxin; 2-Ketoglutarate Oxidoreductase Subunit Delta

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MSKKTAEPVKVAPKWCKGCGICIEFCPKKVLDYDDKGKVKVTKPEECIKCGLCELRCPDFAIVVKKEDESDEK

Sequences:

>Translated_73_residues
MSKKTAEPVKVAPKWCKGCGICIEFCPKKVLDYDDKGKVKVTKPEECIKCGLCELRCPDFAIVVKKEDESDEK
>Mature_72_residues
SKKTAEPVKVAPKWCKGCGICIEFCPKKVLDYDDKGKVKVTKPEECIKCGLCELRCPDFAIVVKKEDESDEK

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.7.3

Molecular weight: Translated: 8210; Mature: 8079

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
12.3 %Cys+Met (Translated Protein)
11.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
11.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKTAEPVKVAPKWCKGCGICIEFCPKKVLDYDDKGKVKVTKPEECIKCGLCELRCPDF
CCCCCCCCCCCCCHHCCCCCHHHHCCCHHHCCCCCCCCEEEECHHHHHHCCCCCCCCCCE
AIVVKKEDESDEK
EEEEECCCCCCCC
>Mature Secondary Structure 
SKKTAEPVKVAPKWCKGCGICIEFCPKKVLDYDDKGKVKVTKPEECIKCGLCELRCPDF
CCCCCCCCCCCCHHCCCCCHHHHCCCHHHCCCCCCCCEEEECHHHHHHCCCCCCCCCCE
AIVVKKEDESDEK
EEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-oxoglutarate; CoA; oxidized ferredoxin

Specific reaction: 2-oxoglutarate + CoA + oxidized ferredoxin = succinyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA