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The map label for this gene is lldR [C]

Identifier: 188586106

GI number: 188586106

Start: 1552949

End: 1553914

Strand: Direct

Name: lldR [C]

Synonym: Nther_1480

Alternate gene names: 188586106

Gene position: 1552949-1553914 (Clockwise)

Preceding gene: 188586105

Following gene: 188586107

Centisome position: 49.06

GC content: 33.02

Gene sequence:

>966_bases
TTGGAACGAAAAAGCAGAACTCCATATTATTTGCAAATAAAAGAAAATATCAAAAAATTCGTTGAATTCGGATACTGGAC
TAGTGGGACGAAATTACCGACAGAACGTGAACTGGCTGAACGACTTCAAGTTAGTAGAAATACTGTTAGCATGGCTTATA
AAGAATTAGAAAGTGATGGTGTGATTGTTTGTCATCAAGGAAGAGGAACTTTCATTGCAGAGAAAGATGATAAGCTGAAA
CAGCAGAGTAGAAAAGAACATTTATTAAAAATAATTGATGTTTCCATTGAAGAAGCTCTACAATTAGGTTTTACTATCGA
TGATTTTTTGGCCATAACTCACGTTAGGGCAAGAGAGAAGCAGGACATGTTAACTAAGTTAAATATAGCCTTTGTTGAAT
GTAATCAAGAACAACTTCATTACTTTGTAAATGAATTGAATTTTGATAAAGGTGTTTCAATTATTCCTATTCTTGTTTCT
GATTTAAAAAATTATCCTGACACCTATCGGGATAAATTGTCACAGGTAGATATAATTATCACAACTTTCTTCCATTTAGA
AGAGATTAAAGAATCTTTACACGATATCGAAGCTGAGATTTTACCTATAGCTTTGGAATTACAGATGGAGACTGTTGTGA
AAATCGCCAGAGTCCCCTCGAATTCAAGAGTAGGTTTGATATGCAAGTCAGAAAACTTCGCTCATAAATTTATGAACTCT
TTAACAAAAGCAGGAATTGATCATGTAAAAATAGATTTTATTATGACTGAATCAAAAGAAGAAATTATTGAATTTACGAA
TAATGTGGACTATGTTGTCACCAGCCCTGGGAAAAAGCATGTTGTGGCAGATATTATTGATGCTGATCCAGAACAAGAGA
TAACGGAGGTGATATTTAGACCAGATCAGGCTTCATTAAATCTCTTGAAAAGTACACTAGTTGATTTAAAACAAAAAGTT
AGTTAG

Upstream 100 bases:

>100_bases
CCAATCGTATTTTTAATTAAATCTTGTATATCATTATATAAATTGGATTGGTCCAATTTTAGATATATTTTTGAAGTGGG
TGAAAACAATGGAATTTAAA

Downstream 100 bases:

>100_bases
GGGTGAATGCTATGTCAAAGAAGACTGCCGAGCCTGTTAAAGTCGCTCCCAAATGGTGTAAAGGCTGCGGTATATGTATT
GAATTTTGTCCTAAAAAAGT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: GntR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein GntR HTH; Regulatory Protein

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MERKSRTPYYLQIKENIKKFVEFGYWTSGTKLPTERELAERLQVSRNTVSMAYKELESDGVIVCHQGRGTFIAEKDDKLK
QQSRKEHLLKIIDVSIEEALQLGFTIDDFLAITHVRAREKQDMLTKLNIAFVECNQEQLHYFVNELNFDKGVSIIPILVS
DLKNYPDTYRDKLSQVDIIITTFFHLEEIKESLHDIEAEILPIALELQMETVVKIARVPSNSRVGLICKSENFAHKFMNS
LTKAGIDHVKIDFIMTESKEEIIEFTNNVDYVVTSPGKKHVVADIIDADPEQEITEVIFRPDQASLNLLKSTLVDLKQKV
S

Sequences:

>Translated_321_residues
MERKSRTPYYLQIKENIKKFVEFGYWTSGTKLPTERELAERLQVSRNTVSMAYKELESDGVIVCHQGRGTFIAEKDDKLK
QQSRKEHLLKIIDVSIEEALQLGFTIDDFLAITHVRAREKQDMLTKLNIAFVECNQEQLHYFVNELNFDKGVSIIPILVS
DLKNYPDTYRDKLSQVDIIITTFFHLEEIKESLHDIEAEILPIALELQMETVVKIARVPSNSRVGLICKSENFAHKFMNS
LTKAGIDHVKIDFIMTESKEEIIEFTNNVDYVVTSPGKKHVVADIIDADPEQEITEVIFRPDQASLNLLKSTLVDLKQKV
S
>Mature_321_residues
MERKSRTPYYLQIKENIKKFVEFGYWTSGTKLPTERELAERLQVSRNTVSMAYKELESDGVIVCHQGRGTFIAEKDDKLK
QQSRKEHLLKIIDVSIEEALQLGFTIDDFLAITHVRAREKQDMLTKLNIAFVECNQEQLHYFVNELNFDKGVSIIPILVS
DLKNYPDTYRDKLSQVDIIITTFFHLEEIKESLHDIEAEILPIALELQMETVVKIARVPSNSRVGLICKSENFAHKFMNS
LTKAGIDHVKIDFIMTESKEEIIEFTNNVDYVVTSPGKKHVVADIIDADPEQEITEVIFRPDQASLNLLKSTLVDLKQKV
S

Specific function: May Be A Regulatory Protein For The Lct Genes. [C]

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36919; Mature: 36919

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKSRTPYYLQIKENIKKFVEFGYWTSGTKLPTERELAERLQVSRNTVSMAYKELESDG
CCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
VIVCHQGRGTFIAEKDDKLKQQSRKEHLLKIIDVSIEEALQLGFTIDDFLAITHVRAREK
EEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QDMLTKLNIAFVECNQEQLHYFVNELNFDKGVSIIPILVSDLKNYPDTYRDKLSQVDIII
HHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TTFFHLEEIKESLHDIEAEILPIALELQMETVVKIARVPSNSRVGLICKSENFAHKFMNS
HHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHH
LTKAGIDHVKIDFIMTESKEEIIEFTNNVDYVVTSPGKKHVVADIIDADPEQEITEVIFR
HHHCCCCEEEEEEEEECCHHHHHHHCCCCCEEEECCCCCCEEHHHHCCCCHHHHHHHHCC
PDQASLNLLKSTLVDLKQKVS
CCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERKSRTPYYLQIKENIKKFVEFGYWTSGTKLPTERELAERLQVSRNTVSMAYKELESDG
CCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
VIVCHQGRGTFIAEKDDKLKQQSRKEHLLKIIDVSIEEALQLGFTIDDFLAITHVRAREK
EEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QDMLTKLNIAFVECNQEQLHYFVNELNFDKGVSIIPILVSDLKNYPDTYRDKLSQVDIII
HHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TTFFHLEEIKESLHDIEAEILPIALELQMETVVKIARVPSNSRVGLICKSENFAHKFMNS
HHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHH
LTKAGIDHVKIDFIMTESKEEIIEFTNNVDYVVTSPGKKHVVADIIDADPEQEITEVIFR
HHHCCCCEEEEEEEEECCHHHHHHHCCCCCEEEECCCCCCEEHHHHCCCCHHHHHHHHCC
PDQASLNLLKSTLVDLKQKVS
CCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA