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The map label for this gene is trpH [H]

Identifier: 188586105

GI number: 188586105

Start: 1551870

End: 1552700

Strand: Direct

Name: trpH [H]

Synonym: Nther_1479

Alternate gene names: 188586105

Gene position: 1551870-1552700 (Clockwise)

Preceding gene: 188586104

Following gene: 188586106

Centisome position: 49.02

GC content: 36.34

Gene sequence:

>831_bases
ATGAAATGCTTTGGTGATCTACACATACATACAACAGCTTCTGACGGAGTTCTTCATCCTCATGAAATTATTGACAGGGC
AGAAGAAAAGCAAATTGATTATATAGCAATAGCGGATCATGATACGTTTTTAGGAGTTGAAAAGTTATTAGTTGATAAAA
GGCTTAAAAGGAGTAAGATTACATTGATACCGGCCATAGAAATTTCTACAGATCTGGCCGATGAAGAGCTACATATACTT
GGTTACTTTAATTCTGTCAATAACAAGCAGCTGCACAATGCCTTAAATAAACTTAGAGAGTACAGAGAAGAGAGAATCAC
AAAGATTGTCGATAAATTAACTAAGATGCGATGTCCTATATCATTAAAAAAAGTGTATCAACATTCCGTCGAGGGGTCCA
TTGGAAGGCCTCATATTGCAAGGGAAATGGTAAAACAGGGATATGTTTCATCCGTTAGTGAGGCCTTTGAAAAATATCTA
GCCAAGGATAGGCCTGCTTATGTGAAAAGGGAAAAGTTGACTCCAGAAATTGCTATAAATATGATTCGTGAGGGTGGTGG
AATTGCAGTTTGGGCTCATCCAGGTATTACCAAAAATCCTGAAAAGTCCTTTCAACATCTCATTGACGTAGGTATCCAAG
GAATTGAACTTTATCATCCATACCACAGTTTTAGTTTTGAAATTAGTTGGCGAGATAAGATAATTAATAATAACTTAATA
ATCACAGGGGGATCGGATTTTCATGATTATGAAGACCCTCCCGTTGATTTAGGAACAAAGGGGATAAATTGCAGTGAAAT
TACTAAAATGATTCAGATGATCAACGAATGA

Upstream 100 bases:

>100_bases
TGTAATCTTAGTGAAACTACTATTCAGAAAGTTTTAGGGGATAATTGGCTCAGGGTATTAAACGAGGTATTACCGGAGGA
TTGACATTAGAGGTGATTAT

Downstream 100 bases:

>100_bases
TCAAAGAGTCAAAAAAAGTTATTGGACCAATGGACTGATCCATTGGTCTTTTTTATGAAAAATTTTAAAATTAAGGGAGG
ATTTCATTAATTAATAGAGA

Product: PHP domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKCFGDLHIHTTASDGVLHPHEIIDRAEEKQIDYIAIADHDTFLGVEKLLVDKRLKRSKITLIPAIEISTDLADEELHIL
GYFNSVNNKQLHNALNKLREYREERITKIVDKLTKMRCPISLKKVYQHSVEGSIGRPHIAREMVKQGYVSSVSEAFEKYL
AKDRPAYVKREKLTPEIAINMIREGGGIAVWAHPGITKNPEKSFQHLIDVGIQGIELYHPYHSFSFEISWRDKIINNNLI
ITGGSDFHDYEDPPVDLGTKGINCSEITKMIQMINE

Sequences:

>Translated_276_residues
MKCFGDLHIHTTASDGVLHPHEIIDRAEEKQIDYIAIADHDTFLGVEKLLVDKRLKRSKITLIPAIEISTDLADEELHIL
GYFNSVNNKQLHNALNKLREYREERITKIVDKLTKMRCPISLKKVYQHSVEGSIGRPHIAREMVKQGYVSSVSEAFEKYL
AKDRPAYVKREKLTPEIAINMIREGGGIAVWAHPGITKNPEKSFQHLIDVGIQGIELYHPYHSFSFEISWRDKIINNNLI
ITGGSDFHDYEDPPVDLGTKGINCSEITKMIQMINE
>Mature_276_residues
MKCFGDLHIHTTASDGVLHPHEIIDRAEEKQIDYIAIADHDTFLGVEKLLVDKRLKRSKITLIPAIEISTDLADEELHIL
GYFNSVNNKQLHNALNKLREYREERITKIVDKLTKMRCPISLKKVYQHSVEGSIGRPHIAREMVKQGYVSSVSEAFEKYL
AKDRPAYVKREKLTPEIAINMIREGGGIAVWAHPGITKNPEKSFQHLIDVGIQGIELYHPYHSFSFEISWRDKIINNNLI
ITGGSDFHDYEDPPVDLGTKGINCSEITKMIQMINE

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=266, Percent_Identity=31.9548872180451, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31526; Mature: 31526

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCFGDLHIHTTASDGVLHPHEIIDRAEEKQIDYIAIADHDTFLGVEKLLVDKRLKRSKI
CCCEECEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCE
TLIPAIEISTDLADEELHILGYFNSVNNKQLHNALNKLREYREERITKIVDKLTKMRCPI
EEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SLKKVYQHSVEGSIGRPHIAREMVKQGYVSSVSEAFEKYLAKDRPAYVKREKLTPEIAIN
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHH
MIREGGGIAVWAHPGITKNPEKSFQHLIDVGIQGIELYHPYHSFSFEISWRDKIINNNLI
HHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEHHHCCCCCEE
ITGGSDFHDYEDPPVDLGTKGINCSEITKMIQMINE
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKCFGDLHIHTTASDGVLHPHEIIDRAEEKQIDYIAIADHDTFLGVEKLLVDKRLKRSKI
CCCEECEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCE
TLIPAIEISTDLADEELHILGYFNSVNNKQLHNALNKLREYREERITKIVDKLTKMRCPI
EEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SLKKVYQHSVEGSIGRPHIAREMVKQGYVSSVSEAFEKYLAKDRPAYVKREKLTPEIAIN
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHH
MIREGGGIAVWAHPGITKNPEKSFQHLIDVGIQGIELYHPYHSFSFEISWRDKIINNNLI
HHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEHHHCCCCCEE
ITGGSDFHDYEDPPVDLGTKGINCSEITKMIQMINE
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]