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The map label for this gene is rnfC [C]

Identifier: 188586058

GI number: 188586058

Start: 1499136

End: 1499348

Strand: Direct

Name: rnfC [C]

Synonym: Nther_1432

Alternate gene names: 188586058

Gene position: 1499136-1499348 (Clockwise)

Preceding gene: 188586057

Following gene: 188586059

Centisome position: 47.36

GC content: 43.19

Gene sequence:

>213_bases
ATGATTTTTATTGATGTTAAGGGAGAGGAGAAAGGAGGTGGGACCGTGGCTTTTCGTATTACTGAAGAGTGCATTGCATG
TGGCTCCTGCTTGGATGCTTGTCCAGTGGATGCCATTAAAGAAGGTGAGGAAATTTTTAGCATAACAGAAGACTGCACTG
AGTGTGGTTCATGTGTAGATGAGTGCCCTACTGATGCTATTGTTGAAGAGTAA

Upstream 100 bases:

>100_bases
TAAGAATTATTAAGGTAAATTTTGGGAACGATATGGAATCACATACCACAAAGCTTAAGTTAACAGCTGTAAACGAGAGT
GATTAGGAGAACTGGTAATT

Downstream 100 bases:

>100_bases
AAATCACTACCCCCTCACCCTCATTGAGGGGGTATTAGTTTCTATAGACAGAGTGGATTGAGGTGGATAACTTTGGAGAG
CTTGCAAACTTATTTAAATA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MIFIDVKGEEKGGGTVAFRITEECIACGSCLDACPVDAIKEGEEIFSITEDCTECGSCVDECPTDAIVEE

Sequences:

>Translated_70_residues
MIFIDVKGEEKGGGTVAFRITEECIACGSCLDACPVDAIKEGEEIFSITEDCTECGSCVDECPTDAIVEE
>Mature_70_residues
MIFIDVKGEEKGGGTVAFRITEECIACGSCLDACPVDAIKEGEEIFSITEDCTECGSCVDECPTDAIVEE

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Inner membrane-associated (By similarity) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 7426; Mature: 7426

Theoretical pI: Translated: 3.55; Mature: 3.55

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
12.9 %Cys+Met (Translated Protein)
11.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
12.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFIDVKGEEKGGGTVAFRITEECIACGSCLDACPVDAIKEGEEIFSITEDCTECGSCVD
CEEEECCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHH
ECPTDAIVEE
HCCCCCCCCC
>Mature Secondary Structure
MIFIDVKGEEKGGGTVAFRITEECIACGSCLDACPVDAIKEGEEIFSITEDCTECGSCVD
CEEEECCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHH
ECPTDAIVEE
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 4Fe-4S clusters [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2606914 [H]