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The map label for this gene is flhF [H]

Identifier: 188586040

GI number: 188586040

Start: 1483779

End: 1485179

Strand: Direct

Name: flhF [H]

Synonym: Nther_1414

Alternate gene names: 188586040

Gene position: 1483779-1485179 (Clockwise)

Preceding gene: 188586039

Following gene: 188586041

Centisome position: 46.87

GC content: 32.69

Gene sequence:

>1401_bases
ATGAAAGTCAAAAAATACTTGGCCAATAGTGAAAAAGAAGCACTAGAACAAATTAAAGCAGAAATGGGAAATAATGCTAT
AATTCTAAATACCCGGAGAGTCAAAAAAGGTGGTTTTTTCGGGTTATTTGGTAAAACTATGCTAGAAGTGACTGTAGCAA
ATGATGCAGAAGCTAAAACCAAATTTGATAATATTGCAGAAAATAAAGATGATAATAAATTTTCCCTTACTTTACCAAAA
CATAATTCTAAAAGTCCTAAGACGCAAAACTCCTTTAGTAATCATCATCCGGCCAATATGAACAACTCAAATACCAACCA
AAATAAAAAAGAACAATTTAAACATTTACGCGAAATTATCGAAAAACGCCAACAGGAATATAATAACGAATTGGATGAAA
CTAGCAGTACAGATGTTGTTCATTCTGTCCAAGGCAAAACCTCCCCAAAGATTGATGAACAGATAACAGATAAAGCACAA
AACAGTTATTCAAATACCCATAATGAATCTTTGGAAGAACTCAAAAACGAACTTAATCAAACCAAAGATATGATGCAAAC
TATGATGAAAGAAGTTAGACAAAGTTCTTTTCGAGACAAACTCCCTGAACATGTAAATAAATATTATGACTTACTCTTAG
AGCACGATGTGATTGATCAGCTAGCTCAAGAGTTGATTTCTCAAACTATGAAAGAAATGGATTTTAGAGGGTTAGAAGAT
GAACAAGCCTTTGTTCGTGAACTAAAAACCATTATTGGTAAAAAATTATCAGAACAAGTCACCCCATTAAAGGACAAAAA
CACTACTGGACCAAGAATTATAAGCATGATTGGCCCTACTGGAGTAGGTAAAACTACAACTGTGGCCAAGTTAGCCGCTA
GGCATACTTTGATGGAAAATGCAGAGGTGGGTTTGATTACTATAGATACATACAGAATTGCTGCAGTGGAGCAATTAAAA
ACATATGGTGATATATTAAGCCTACCTGTTGAAGTAGTCATGACACCACAAGAACTTAAAGATGCCATGCATAAATTAAA
AGATAAAGATTTAATCATTATTGATACAGCTGGACGAAGCCATAAAAATGAAATGCAAATGAAAGAACTGAAAGGATTCA
TTGAAACCTGTGAACCCCATATTAATCATTTGGTGTTAAGCCTTGGTACTAAATATAAAGATTTAAAAAATATTATTGCC
AAGTACAATCACATTAATTTTAACAGCCTTATTTTGACTAAGACTGATGAAACTGACAATCTAGGAAACTTATTAAATCT
TTTATGGGAATTTCAAACCGGTTGTTCATACGTGACTACAGGACAAAATGTACCTGATGATTTAGAAGAATTTTCCTTAG
AAAAACTATTAGATAAAATATTGGGTGAGAACAATGAATGA

Upstream 100 bases:

>100_bases
ACGGTTAACAGAAGGTTTTTTACCAAATCTGATGGTGGTATCTTTTCATGAATTAGATCCTCAAATTGAAGCACAATCTG
TTGGGGTGGTGAATACATAA

Downstream 100 bases:

>100_bases
TCAAGCTAAAAGACTAAGACAACTGGTTAAGGAAAAAAGTAGTGGAGAACATAGTGCCCCCACTATAGAACATCAACCCG
AAATCATTACAATTTCGAGT

Product: GTP-binding signal recognition particle SRP54 G- domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKVKKYLANSEKEALEQIKAEMGNNAIILNTRRVKKGGFFGLFGKTMLEVTVANDAEAKTKFDNIAENKDDNKFSLTLPK
HNSKSPKTQNSFSNHHPANMNNSNTNQNKKEQFKHLREIIEKRQQEYNNELDETSSTDVVHSVQGKTSPKIDEQITDKAQ
NSYSNTHNESLEELKNELNQTKDMMQTMMKEVRQSSFRDKLPEHVNKYYDLLLEHDVIDQLAQELISQTMKEMDFRGLED
EQAFVRELKTIIGKKLSEQVTPLKDKNTTGPRIISMIGPTGVGKTTTVAKLAARHTLMENAEVGLITIDTYRIAAVEQLK
TYGDILSLPVEVVMTPQELKDAMHKLKDKDLIIIDTAGRSHKNEMQMKELKGFIETCEPHINHLVLSLGTKYKDLKNIIA
KYNHINFNSLILTKTDETDNLGNLLNLLWEFQTGCSYVTTGQNVPDDLEEFSLEKLLDKILGENNE

Sequences:

>Translated_466_residues
MKVKKYLANSEKEALEQIKAEMGNNAIILNTRRVKKGGFFGLFGKTMLEVTVANDAEAKTKFDNIAENKDDNKFSLTLPK
HNSKSPKTQNSFSNHHPANMNNSNTNQNKKEQFKHLREIIEKRQQEYNNELDETSSTDVVHSVQGKTSPKIDEQITDKAQ
NSYSNTHNESLEELKNELNQTKDMMQTMMKEVRQSSFRDKLPEHVNKYYDLLLEHDVIDQLAQELISQTMKEMDFRGLED
EQAFVRELKTIIGKKLSEQVTPLKDKNTTGPRIISMIGPTGVGKTTTVAKLAARHTLMENAEVGLITIDTYRIAAVEQLK
TYGDILSLPVEVVMTPQELKDAMHKLKDKDLIIIDTAGRSHKNEMQMKELKGFIETCEPHINHLVLSLGTKYKDLKNIIA
KYNHINFNSLILTKTDETDNLGNLLNLLWEFQTGCSYVTTGQNVPDDLEEFSLEKLLDKILGENNE
>Mature_466_residues
MKVKKYLANSEKEALEQIKAEMGNNAIILNTRRVKKGGFFGLFGKTMLEVTVANDAEAKTKFDNIAENKDDNKFSLTLPK
HNSKSPKTQNSFSNHHPANMNNSNTNQNKKEQFKHLREIIEKRQQEYNNELDETSSTDVVHSVQGKTSPKIDEQITDKAQ
NSYSNTHNESLEELKNELNQTKDMMQTMMKEVRQSSFRDKLPEHVNKYYDLLLEHDVIDQLAQELISQTMKEMDFRGLED
EQAFVRELKTIIGKKLSEQVTPLKDKNTTGPRIISMIGPTGVGKTTTVAKLAARHTLMENAEVGLITIDTYRIAAVEQLK
TYGDILSLPVEVVMTPQELKDAMHKLKDKDLIIIDTAGRSHKNEMQMKELKGFIETCEPHINHLVLSLGTKYKDLKNIIA
KYNHINFNSLILTKTDETDNLGNLLNLLWEFQTGCSYVTTGQNVPDDLEEFSLEKLLDKILGENNE

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=242, Percent_Identity=29.3388429752066, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788963, Length=269, Percent_Identity=27.1375464684015, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193206261, Length=301, Percent_Identity=26.578073089701, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6325345, Length=196, Percent_Identity=29.5918367346939, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17647949, Length=267, Percent_Identity=26.2172284644195, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 53117; Mature: 53117

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKKYLANSEKEALEQIKAEMGNNAIILNTRRVKKGGFFGLFGKTMLEVTVANDAEAKT
CCCHHHHCCCHHHHHHHHHHHHCCCEEEEECCEECCCCCEEEHHHHHEEEEECCCCHHHH
KFDNIAENKDDNKFSLTLPKHNSKSPKTQNSFSNHHPANMNNSNTNQNKKEQFKHLREII
HHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EKRQQEYNNELDETSSTDVVHSVQGKTSPKIDEQITDKAQNSYSNTHNESLEELKNELNQ
HHHHHHHCCHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TKDMMQTMMKEVRQSSFRDKLPEHVNKYYDLLLEHDVIDQLAQELISQTMKEMDFRGLED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EQAFVRELKTIIGKKLSEQVTPLKDKNTTGPRIISMIGPTGVGKTTTVAKLAARHTLMEN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCC
AEVGLITIDTYRIAAVEQLKTYGDILSLPVEVVMTPQELKDAMHKLKDKDLIIIDTAGRS
CCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHEECHHHHHHHHHHHCCCCEEEEECCCCC
HKNEMQMKELKGFIETCEPHINHLVLSLGTKYKDLKNIIAKYNHINFNSLILTKTDETDN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
LGNLLNLLWEFQTGCSYVTTGQNVPDDLEEFSLEKLLDKILGENNE
HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKVKKYLANSEKEALEQIKAEMGNNAIILNTRRVKKGGFFGLFGKTMLEVTVANDAEAKT
CCCHHHHCCCHHHHHHHHHHHHCCCEEEEECCEECCCCCEEEHHHHHEEEEECCCCHHHH
KFDNIAENKDDNKFSLTLPKHNSKSPKTQNSFSNHHPANMNNSNTNQNKKEQFKHLREII
HHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EKRQQEYNNELDETSSTDVVHSVQGKTSPKIDEQITDKAQNSYSNTHNESLEELKNELNQ
HHHHHHHCCHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
TKDMMQTMMKEVRQSSFRDKLPEHVNKYYDLLLEHDVIDQLAQELISQTMKEMDFRGLED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EQAFVRELKTIIGKKLSEQVTPLKDKNTTGPRIISMIGPTGVGKTTTVAKLAARHTLMEN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCC
AEVGLITIDTYRIAAVEQLKTYGDILSLPVEVVMTPQELKDAMHKLKDKDLIIIDTAGRS
CCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHEECHHHHHHHHHHHCCCCEEEEECCCCC
HKNEMQMKELKGFIETCEPHINHLVLSLGTKYKDLKNIIAKYNHINFNSLILTKTDETDN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
LGNLLNLLWEFQTGCSYVTTGQNVPDDLEEFSLEKLLDKILGENNE
HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1447978; 9384377 [H]