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The map label for this gene is ftsY [H]

Identifier: 188585992

GI number: 188585992

Start: 1439305

End: 1440237

Strand: Direct

Name: ftsY [H]

Synonym: Nther_1366

Alternate gene names: 188585992

Gene position: 1439305-1440237 (Clockwise)

Preceding gene: 188585991

Following gene: 188585993

Centisome position: 45.47

GC content: 38.26

Gene sequence:

>933_bases
ATGGGGATATTTTCAAAAATCAAGGACGGTCTAACAAAGACTAGACGTGGATTCGTGTCCCAGATAGAAAAGTTGTTAAC
AGGTAAAAAGATTGATGAAGAGTTCTTTGAAGAGCTAGAAGATATTTTAATAAGTGCTGATGTAGGAGTGGATACCACTT
TAAAAATTGTAGAAAACTTGCGTCAAAGGATAAAGGAAGAAAAAATAAAGGATTCGGAAACTGTTAATCAAGTTTTAAAA
GATGAAATGAAGGATATGCTTATGCAAAAAGATAAGTCACTAACTCCCCAAGAAGGGACCCCTAAAGTAAGTTTAGTTGT
AGGTGTGAATGGTGTTGGGAAAACAACTTCCATTGGAAAGCTGGCATATAAACACAAACAAGAAGGTAAAAAAGTGGTTT
TAGCGGCCGGGGACACTTTTAGAGCCGCTGCAATAGACCAACTACAAATATGGGGTGACCGAGTTGGAGTTGATGTGATT
AAACATCAGGAGGGTGCGGACCCTGCTGCAGTAGTGTATGATGCTATTCAGGCTGGAAGAGCCCGCAATGCTGATCATCT
AATATGTGATACGGCAGGTCGTTTGCATAATAAGAAAAATCTTATGGAAGAATTAAAGAAGGTATCAAGAATAATTGAAA
GAGAAATCGGAACTCCTCCACATGATGTTTACATGGTATTAGATGCAACTACTGGCCAAAATGCCCTGAGTCAAGCCAAG
CTATTTTCAGAGGTAACTCCCGTATCCGGTATTATTCTTACTAAATTAGATGGTACTGCAAAAGGTGGTATTGTGCTAGC
ACTAGCTAATGAAATGGAGATACCAATTAAATATATTGGGGTTGGTGAGGGAATGGAAGATTTACAAGATTTTGATCCAG
ACCAATTTATCGATGCTCTGTTTGCTAATTCGGGAGAAAATAATGAAGAGTAA

Upstream 100 bases:

>100_bases
GCTGAACCCGGCATCAGTCAACTTATTTCAGTTAAACTAGAAGATGATGATATAATAGAAACCGCTTAGATTGGAAAATA
AGAAAGGAGTGCAGTTAAAA

Downstream 100 bases:

>100_bases
AGACTCCTTGCTTGACAGGGGAGTCTTTTTTTTGTAGAATATTTTTGTAAAGTGATTTGCCTTTACAGTGATTTTGTAAG
ATTAAACTTTGCAGGTGGGG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MGIFSKIKDGLTKTRRGFVSQIEKLLTGKKIDEEFFEELEDILISADVGVDTTLKIVENLRQRIKEEKIKDSETVNQVLK
DEMKDMLMQKDKSLTPQEGTPKVSLVVGVNGVGKTTSIGKLAYKHKQEGKKVVLAAGDTFRAAAIDQLQIWGDRVGVDVI
KHQEGADPAAVVYDAIQAGRARNADHLICDTAGRLHNKKNLMEELKKVSRIIEREIGTPPHDVYMVLDATTGQNALSQAK
LFSEVTPVSGIILTKLDGTAKGGIVLALANEMEIPIKYIGVGEGMEDLQDFDPDQFIDALFANSGENNEE

Sequences:

>Translated_310_residues
MGIFSKIKDGLTKTRRGFVSQIEKLLTGKKIDEEFFEELEDILISADVGVDTTLKIVENLRQRIKEEKIKDSETVNQVLK
DEMKDMLMQKDKSLTPQEGTPKVSLVVGVNGVGKTTSIGKLAYKHKQEGKKVVLAAGDTFRAAAIDQLQIWGDRVGVDVI
KHQEGADPAAVVYDAIQAGRARNADHLICDTAGRLHNKKNLMEELKKVSRIIEREIGTPPHDVYMVLDATTGQNALSQAK
LFSEVTPVSGIILTKLDGTAKGGIVLALANEMEIPIKYIGVGEGMEDLQDFDPDQFIDALFANSGENNEE
>Mature_309_residues
GIFSKIKDGLTKTRRGFVSQIEKLLTGKKIDEEFFEELEDILISADVGVDTTLKIVENLRQRIKEEKIKDSETVNQVLKD
EMKDMLMQKDKSLTPQEGTPKVSLVVGVNGVGKTTSIGKLAYKHKQEGKKVVLAAGDTFRAAAIDQLQIWGDRVGVDVIK
HQEGADPAAVVYDAIQAGRARNADHLICDTAGRLHNKKNLMEELKKVSRIIEREIGTPPHDVYMVLDATTGQNALSQAKL
FSEVTPVSGIILTKLDGTAKGGIVLALANEMEIPIKYIGVGEGMEDLQDFDPDQFIDALFANSGENNEE

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=294, Percent_Identity=29.9319727891156, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI226371618, Length=211, Percent_Identity=35.0710900473934, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI23308697, Length=307, Percent_Identity=27.0358306188925, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI295424842, Length=307, Percent_Identity=27.0358306188925, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=34.0740740740741, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI1789874, Length=302, Percent_Identity=53.9735099337748, Blast_Score=311, Evalue=4e-86,
Organism=Escherichia coli, GI1788963, Length=302, Percent_Identity=31.7880794701987, Blast_Score=161, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17539958, Length=271, Percent_Identity=29.520295202952, Blast_Score=135, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI193206261, Length=321, Percent_Identity=28.6604361370716, Blast_Score=109, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=310, Percent_Identity=31.2903225806452, Blast_Score=153, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6320498, Length=343, Percent_Identity=25.6559766763848, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17647949, Length=294, Percent_Identity=29.2517006802721, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24641198, Length=326, Percent_Identity=23.9263803680982, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 34046; Mature: 33915

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFSKIKDGLTKTRRGFVSQIEKLLTGKKIDEEFFEELEDILISADVGVDTTLKIVENL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RQRIKEEKIKDSETVNQVLKDEMKDMLMQKDKSLTPQEGTPKVSLVVGVNGVGKTTSIGK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHH
LAYKHKQEGKKVVLAAGDTFRAAAIDQLQIWGDRVGVDVIKHQEGADPAAVVYDAIQAGR
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHCC
ARNADHLICDTAGRLHNKKNLMEELKKVSRIIEREIGTPPHDVYMVLDATTGQNALSQAK
CCCCCEEEECCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHH
LFSEVTPVSGIILTKLDGTAKGGIVLALANEMEIPIKYIGVGEGMEDLQDFDPDQFIDAL
HHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCHHHHHHHH
FANSGENNEE
HHCCCCCCCC
>Mature Secondary Structure 
GIFSKIKDGLTKTRRGFVSQIEKLLTGKKIDEEFFEELEDILISADVGVDTTLKIVENL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RQRIKEEKIKDSETVNQVLKDEMKDMLMQKDKSLTPQEGTPKVSLVVGVNGVGKTTSIGK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHH
LAYKHKQEGKKVVLAAGDTFRAAAIDQLQIWGDRVGVDVIKHQEGADPAAVVYDAIQAGR
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHCC
ARNADHLICDTAGRLHNKKNLMEELKKVSRIIEREIGTPPHDVYMVLDATTGQNALSQAK
CCCCCEEEECCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHH
LFSEVTPVSGIILTKLDGTAKGGIVLALANEMEIPIKYIGVGEGMEDLQDFDPDQFIDAL
HHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHCCHHHHHHHH
FANSGENNEE
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]