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The map label for this gene is 188585993

Identifier: 188585993

GI number: 188585993

Start: 1440347

End: 1440694

Strand: Direct

Name: 188585993

Synonym: Nther_1367

Alternate gene names: NA

Gene position: 1440347-1440694 (Clockwise)

Preceding gene: 188585992

Following gene: 188585994

Centisome position: 45.5

GC content: 32.76

Gene sequence:

>348_bases
ATGCTAGAAAAAACAAATAAATTGATTATGCTCTTTGATTTTTATGGAGAATTATTAACCCCTAGACAAAAGGAAATATT
CAAGTTATATTATTATGAGGATTTTTCTCTGGGAGAGATCTCCGAACTGGAAGGTATTAGTCGGCAGGCTGTATATGACT
TATTACAACGTTGTGAGGAATTACTACAGGATTACGAATCCAGATTGGGTTTTGTTGACAGATTTACCTTTCAAAGGAAA
TCCTTGAAAAAGATAAAAGAAATTTTGACAAGGGAAACTCACCTAGATAATAACACTAGAGAAAAGTGCCTTAAATTGTT
GGATGAATTATTAAGGAGTGAGGCTTAA

Upstream 100 bases:

>100_bases
GCTTGACAGGGGAGTCTTTTTTTTGTAGAATATTTTTGTAAAGTGATTTGCCTTTACAGTGATTTTGTAAGATTAAACTT
TGCAGGTGGGGTATTCTAAA

Downstream 100 bases:

>100_bases
TGCTTCAAAGACTATCAGAAAAATTACAGGATACCTTTGGCAAACTGACAGGAAAAGGTAAAGTCAACGAAAAAGACGTT
AAAGAAGCCATGAGAGAAGT

Product: putative helix-turn-helix protein YlxM/p13 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MLEKTNKLIMLFDFYGELLTPRQKEIFKLYYYEDFSLGEISELEGISRQAVYDLLQRCEELLQDYESRLGFVDRFTFQRK
SLKKIKEILTRETHLDNNTREKCLKLLDELLRSEA

Sequences:

>Translated_115_residues
MLEKTNKLIMLFDFYGELLTPRQKEIFKLYYYEDFSLGEISELEGISRQAVYDLLQRCEELLQDYESRLGFVDRFTFQRK
SLKKIKEILTRETHLDNNTREKCLKLLDELLRSEA
>Mature_115_residues
MLEKTNKLIMLFDFYGELLTPRQKEIFKLYYYEDFSLGEISELEGISRQAVYDLLQRCEELLQDYESRLGFVDRFTFQRK
SLKKIKEILTRETHLDNNTREKCLKLLDELLRSEA

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein [H]

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04297 UPF0122 [H]

EC number: NA

Molecular weight: Translated: 13896; Mature: 13896

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKTNKLIMLFDFYGELLTPRQKEIFKLYYYEDFSLGEISELEGISRQAVYDLLQRCEE
CCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
LLQDYESRLGFVDRFTFQRKSLKKIKEILTRETHLDNNTREKCLKLLDELLRSEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLEKTNKLIMLFDFYGELLTPRQKEIFKLYYYEDFSLGEISELEGISRQAVYDLLQRCEE
CCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHH
LLQDYESRLGFVDRFTFQRKSLKKIKEILTRETHLDNNTREKCLKLLDELLRSEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]