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The map label for this gene is ssp1 [H]

Identifier: 188585973

GI number: 188585973

Start: 1421053

End: 1421274

Strand: Direct

Name: ssp1 [H]

Synonym: Nther_1347

Alternate gene names: 188585973

Gene position: 1421053-1421274 (Clockwise)

Preceding gene: 188585972

Following gene: 188585974

Centisome position: 44.89

GC content: 42.79

Gene sequence:

>222_bases
ATGGGTACAGGTCAAAAAAGAAACAAAGCTCTTGTAGAAGGTGCCGAGAGAGGCCTTTACCAATTCAAATATGAAGTAGC
TAGCGAACTAGGAATTCAGCCTCCTCAAAGTGACTATTGGGGTAATCTTACCTCAAGAGACTGTGGTGCAGTAGGAGGCA
ACATGACTAGAAAGATGGTTGAAGCTTATGAAAACCAGTTGAGCCAAACAGGAGGTCAATAA

Upstream 100 bases:

>100_bases
TTTATTGCCCTTGTGTTTTTTAGTTAGGAAAACACTTCTAGTATTAAGTCTTGCTAAGGGAGAAATAATACAAATAGACA
ATAAAGAAGGAGGTGACAAT

Downstream 100 bases:

>100_bases
CAGAATATCTTCACACATATAAGTTAACAGGGCCGGGTAGACTTAGATCTACCCGGTTTTATTTATATTCTCTAATAAAT
TTATTATAACCCAACGAAAA

Product: small acid-soluble spore protein alpha/beta type

Products: NA

Alternate protein names: SSP-1 [H]

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MGTGQKRNKALVEGAERGLYQFKYEVASELGIQPPQSDYWGNLTSRDCGAVGGNMTRKMVEAYENQLSQTGGQ

Sequences:

>Translated_73_residues
MGTGQKRNKALVEGAERGLYQFKYEVASELGIQPPQSDYWGNLTSRDCGAVGGNMTRKMVEAYENQLSQTGGQ
>Mature_72_residues
GTGQKRNKALVEGAERGLYQFKYEVASELGIQPPQSDYWGNLTSRDCGAVGGNMTRKMVEAYENQLSQTGGQ

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 8002; Mature: 7871

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00304 SASP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTGQKRNKALVEGAERGLYQFKYEVASELGIQPPQSDYWGNLTSRDCGAVGGNMTRKMV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
EAYENQLSQTGGQ
HHHHHHHHHCCCC
>Mature Secondary Structure 
GTGQKRNKALVEGAERGLYQFKYEVASELGIQPPQSDYWGNLTSRDCGAVGGNMTRKMV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
EAYENQLSQTGGQ
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2037223; 11792842 [H]