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The map label for this gene is degV [H]

Identifier: 188585972

GI number: 188585972

Start: 1420069

End: 1420908

Strand: Direct

Name: degV [H]

Synonym: Nther_1346

Alternate gene names: 188585972

Gene position: 1420069-1420908 (Clockwise)

Preceding gene: 188585971

Following gene: 188585973

Centisome position: 44.86

GC content: 34.52

Gene sequence:

>840_bases
ATGACGATTCATATAGTAACTGATAGTACATGTGATTTACCTAAAGAAATAATAGAAAAATATAGTATCAATGTAGTACC
CTTAAACGTTCATTTTGCGGAAAATACCTATAAAGACAAGATTGACTTATTTCCTGATGAATTCTACCAAAAATTAGTGA
ATTCACAGGAACATCCCGAAACTTCTCAACCTTCTCCAGGAGATTTTGTAAACTGTTATCAAGAAATTGCAGGGGAGAAG
GATCAAATATTATCAATACATTTGTCCTCAGAGCTTAGTGGCACATTTCAATCAGCTAATATTGCTAAGGAAATGCTACC
TGATTTAGATATTACGGTGATTGATTCTAAATTGGCATCCCTGGCTATGGGATTATTAGTCAAAAAGGCTGCAGAAGCAA
GAGAGCAAGGAGCTTCTATGGAAGAAATTGTCGACAAAATTGATGTTTTGAAAGAAAAAATTACCTTGTATTTTTTTGTG
GATACTTTGGAATATTTAAAACGAGGAGGCAGAATTGGTAAGGCTCAAGCCCTGGTAGGCTCTCTTTTAGATATCAAACC
GATATTAACCATTAATAATGAGGGAATCATTGAACCCATTGATAAAGTGAGAACAAAAAAGAAAGCAATAAACAAGGTAA
TTGATCTATTAAAAGAAGCAAAGGGAGACGTGAATGTAACGGCGGGAATTCTTTATAGTGGTAATGAACAAGAAAATCTA
GATATGATTAAAACTAAAATTAGCGAAGAATTTAATTGTGAAGACATGGTGATTTCACCCTTCGGACCTGTTATTGGAGT
CCATGTTGGTCCAGGGGCCTTTGGAGTATGTATGATTTAA

Upstream 100 bases:

>100_bases
CTAGAAGGTATTTTCACCGACTGTGAAATTGAAAGCCATTACGGAGGTCAACCGTTATATTACTATACATTTTCTGTGGA
GTAATTAAGGAGGCTAGACT

Downstream 100 bases:

>100_bases
CAAATAAAATTTAATAATTCATCATAAATCCGAACACAAGGGTGTTTATTGCCCTTGTGTTTTTTAGTTAGGAAAACACT
TCTAGTATTAAGTCTTGCTA

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTIHIVTDSTCDLPKEIIEKYSINVVPLNVHFAENTYKDKIDLFPDEFYQKLVNSQEHPETSQPSPGDFVNCYQEIAGEK
DQILSIHLSSELSGTFQSANIAKEMLPDLDITVIDSKLASLAMGLLVKKAAEAREQGASMEEIVDKIDVLKEKITLYFFV
DTLEYLKRGGRIGKAQALVGSLLDIKPILTINNEGIIEPIDKVRTKKKAINKVIDLLKEAKGDVNVTAGILYSGNEQENL
DMIKTKISEEFNCEDMVISPFGPVIGVHVGPGAFGVCMI

Sequences:

>Translated_279_residues
MTIHIVTDSTCDLPKEIIEKYSINVVPLNVHFAENTYKDKIDLFPDEFYQKLVNSQEHPETSQPSPGDFVNCYQEIAGEK
DQILSIHLSSELSGTFQSANIAKEMLPDLDITVIDSKLASLAMGLLVKKAAEAREQGASMEEIVDKIDVLKEKITLYFFV
DTLEYLKRGGRIGKAQALVGSLLDIKPILTINNEGIIEPIDKVRTKKKAINKVIDLLKEAKGDVNVTAGILYSGNEQENL
DMIKTKISEEFNCEDMVISPFGPVIGVHVGPGAFGVCMI
>Mature_278_residues
TIHIVTDSTCDLPKEIIEKYSINVVPLNVHFAENTYKDKIDLFPDEFYQKLVNSQEHPETSQPSPGDFVNCYQEIAGEKD
QILSIHLSSELSGTFQSANIAKEMLPDLDITVIDSKLASLAMGLLVKKAAEAREQGASMEEIVDKIDVLKEKITLYFFVD
TLEYLKRGGRIGKAQALVGSLLDIKPILTINNEGIIEPIDKVRTKKKAINKVIDLLKEAKGDVNVTAGILYSGNEQENLD
MIKTKISEEFNCEDMVISPFGPVIGVHVGPGAFGVCMI

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30830; Mature: 30699

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHIVTDSTCDLPKEIIEKYSINVVPLNVHFAENTYKDKIDLFPDEFYQKLVNSQEHPE
CEEEEEECCCCCCHHHHHHHHCCEEEEEEEEECCCCCCCHHCCCHHHHHHHHHCCCCCCC
TSQPSPGDFVNCYQEIAGEKDQILSIHLSSELSGTFQSANIAKEMLPDLDITVIDSKLAS
CCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHH
LAMGLLVKKAAEAREQGASMEEIVDKIDVLKEKITLYFFVDTLEYLKRGGRIGKAQALVG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SLLDIKPILTINNEGIIEPIDKVRTKKKAINKVIDLLKEAKGDVNVTAGILYSGNEQENL
HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHH
DMIKTKISEEFNCEDMVISPFGPVIGVHVGPGAFGVCMI
HHHHHHHCCCCCCCCEEECCCCCEEEEEECCCCCEEECC
>Mature Secondary Structure 
TIHIVTDSTCDLPKEIIEKYSINVVPLNVHFAENTYKDKIDLFPDEFYQKLVNSQEHPE
EEEEEECCCCCCHHHHHHHHCCEEEEEEEEECCCCCCCHHCCCHHHHHHHHHCCCCCCC
TSQPSPGDFVNCYQEIAGEKDQILSIHLSSELSGTFQSANIAKEMLPDLDITVIDSKLAS
CCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHH
LAMGLLVKKAAEAREQGASMEEIVDKIDVLKEKITLYFFVDTLEYLKRGGRIGKAQALVG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SLLDIKPILTINNEGIIEPIDKVRTKKKAINKVIDLLKEAKGDVNVTAGILYSGNEQENL
HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHH
DMIKTKISEEFNCEDMVISPFGPVIGVHVGPGAFGVCMI
HHHHHHHCCCCCCCCEEECCCCCEEEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 9384377; 3141378 [H]