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The map label for this gene is rpmB

Identifier: 188585969

GI number: 188585969

Start: 1417583

End: 1417774

Strand: Reverse

Name: rpmB

Synonym: Nther_1343

Alternate gene names: 188585969

Gene position: 1417774-1417583 (Counterclockwise)

Preceding gene: 188585976

Following gene: 188585951

Centisome position: 44.79

GC content: 35.94

Gene sequence:

>192_bases
ATGGCTAATTTATGTGAAATTTGCGGTAAAGGAAATAACTCCGGTGCAAGTGTATCCCATTCCAATAAGAAAACAAAAAG
AAAATGGAAGGGGAATATCCAAAAATTAAAAGCCATGGTCGATGGCAGACCTAAAAAAGTTAAAGTGTGCACCCAGTGTA
TTAAAGCCGGGAAAATAGAAAGAGCATTTTAA

Upstream 100 bases:

>100_bases
CTAAAATACACATAGTTTAGTTGGTATTATTATAATTACTTAGTTAGAAAATAAACAGGTAGAACAACTCATCCAATATC
AAAATAAAGGGGGTATAAAA

Downstream 100 bases:

>100_bases
GTAAAAAAGCGCTGTAAAAGCGCTTTTTTATTTATTTTATTTTACGACTCCTGTCCCTTATTCCCTTTACCTAAAAAACC
TCTCAATAATTTAGCTAAAA

Product: LSU ribosomal protein L28P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MANLCEICGKGNNSGASVSHSNKKTKRKWKGNIQKLKAMVDGRPKKVKVCTQCIKAGKIERAF

Sequences:

>Translated_63_residues
MANLCEICGKGNNSGASVSHSNKKTKRKWKGNIQKLKAMVDGRPKKVKVCTQCIKAGKIERAF
>Mature_62_residues
ANLCEICGKGNNSGASVSHSNKKTKRKWKGNIQKLKAMVDGRPKKVKVCTQCIKAGKIERAF

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_NATTJ (B2A2L1)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001917514.1
- ProteinModelPortal:   B2A2L1
- SMR:   B2A2L1
- GeneID:   6316561
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_1343
- HOGENOM:   HBG597003
- OMA:   NACTSCI
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 6919; Mature: 6788

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLCEICGKGNNSGASVSHSNKKTKRKWKGNIQKLKAMVDGRPKKVKVCTQCIKAGKIE
CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
RAF
CCC
>Mature Secondary Structure 
ANLCEICGKGNNSGASVSHSNKKTKRKWKGNIQKLKAMVDGRPKKVKVCTQCIKAGKIE
CCHHHHHCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
RAF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA