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The map label for this gene is yloA [H]

Identifier: 188585951

GI number: 188585951

Start: 1397082

End: 1398821

Strand: Reverse

Name: yloA [H]

Synonym: Nther_1325

Alternate gene names: 188585951

Gene position: 1398821-1397082 (Counterclockwise)

Preceding gene: 188585969

Following gene: 188585896

Centisome position: 44.19

GC content: 33.79

Gene sequence:

>1740_bases
ATGCCAATAGACGGTTTTACCATCAGAGGAATTGTAGGCGAGTTACAAAAAATAATTGGTTCTAAAATTAACCAAATTCA
TCAACCTCAAAAAGAAGTTATTACTCTAAAATTATATGGAAGAAGTGGCCAGAACACGTTGTTATTAAGTGCTCATCCCA
AGTACTGTCGCGTGAATCTAACTGAAAAGAAACTGGAAAACCCGGCTTCTCCCAGCTCATTTTGTATGTTTTTGCGTAAA
TTTTTAGTTGGAGGAAAAATTACCGATATTGTTCAGTATCATGGTGATCGGATAGTTGATATTCACATAAAACGCAGGGA
TGAGTTTGATTTGACCGAAGAATTCCTGTTAACTTGTGAAATAATGGGTAAGCACAGTAATGTGATTTTAGTCAATAAAA
AAACAAAGAGAATTATGGATGCTTTAAGGCGTATTCAAAGAGAACTCTCTGCCTCTGATCAAAGAGAATTAGTGCCGGGG
ACCCTATTTGAACGACCACCAGCTCCAGATAAACTAGATCCCTTTTCTGAAAATCTAGATAAAGATAAGTTTAATAAACT
ATTATCTCAATACCAAAATCAAATAGATAAACTGTTTTTTGATAACTTTTTAGGAGTAAGTCCCTTTTTATCAAAGCAAA
TAATAAATACTACCTACCCAGAAGGTGTAGAAGCTAACGAGCTGTATAATATTTGGGAAAAAATTATAAATGATATAATG
TCCCTGTCATATCAACCTGTTATTGTTTATGACAAAACCACAACTGAGATGAAGGATGTTTATTGGGATAATAGATTTTA
TAATACTGATAATTTTAAATTAGTCGAGTACGATACATTAAATCAAGCAATAGATGATTTTGCTCATTATAAGGGACAAG
AAGAACTGGCTAAGCAATTAAAATCACAACTAAAGAAAAAACTATCCGGAGCAGCTAAAAAAGCAAGAAAAAAACTTAAA
AAACAAACAAAGGAATATGAAACTTCGGAAGGTGGTACTAAATACAAAAAATATGGTGAACTCTTAAGTGCTAATTATCA
TTTAGTTAATAATGCACATACCGAAACAGTAGAAGTTTACGATTATTATCAAGATCCTCCCAAACTACTAGGAATTAAAA
TCGACCCATCTAAAACTCCAGGAGAAAACATTGACCATTACTTTAAAAAATTTAAAAAATGCACCAATCGTATCAAAAAA
CTAGGAACTGAGATAAAGAAAACCAGGCAGGAAATTTCTTATTTGGAAGGCTTACTATTCCAAGTCGATGAAGCAGCTAA
ATTGGAGGAACTAAAAGACATTAGGCAGGAGCTAATGGAGCAAGGTTACTTAAAGAAACAAACTAAAGACCGAGAAAAAG
CCCCTCGAGGTAGTGAAGGTGATTTTATCAAATATACTTCTAGTGATGGTTTTACAATTATGGTAGGAAAAAACAATAAA
CAGAACGATCGCTTAACGTTAAAGAAGGCTTCCAAAAACGACACTTGGTTTCACACCAAGGAAATTGCAGGAACTCATGT
AATTGTTAAAGGTGATAATATTCCGGAAGCAACTATCCTTGAAGCTGCACAAGTTGCGGCATACCATTCTAAAGCTAGAA
ACTCTGAAAATGTACCTGTGGATTACACTCAAATTAAAAACGTCAGAAAACCCAAAGGAGCAAAACCAGGAATGGTAATT
TATGATAATCACAAGACTTTATATGTGGATCCAAAGTTACCACAAACTGACTCCAACTAA

Upstream 100 bases:

>100_bases
CATAAATTTAAAAATAATACTTTTATCAAGGGTAAAATTTGACCCGATCTTTAATACCATTTATACTCTAATTGATACTT
GAAACGGAGGGAACAATCTA

Downstream 100 bases:

>100_bases
TTCAATATAATTTGAAATCATTTTTTATCTAAAATTGGTTTTGTCACTTCTGGTTAGTTTAGAAATCAGGTTCATCATAT
CTGAGGGCAGGGGAGCTCTA

Product: Fibronectin-binding A domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MPIDGFTIRGIVGELQKIIGSKINQIHQPQKEVITLKLYGRSGQNTLLLSAHPKYCRVNLTEKKLENPASPSSFCMFLRK
FLVGGKITDIVQYHGDRIVDIHIKRRDEFDLTEEFLLTCEIMGKHSNVILVNKKTKRIMDALRRIQRELSASDQRELVPG
TLFERPPAPDKLDPFSENLDKDKFNKLLSQYQNQIDKLFFDNFLGVSPFLSKQIINTTYPEGVEANELYNIWEKIINDIM
SLSYQPVIVYDKTTTEMKDVYWDNRFYNTDNFKLVEYDTLNQAIDDFAHYKGQEELAKQLKSQLKKKLSGAAKKARKKLK
KQTKEYETSEGGTKYKKYGELLSANYHLVNNAHTETVEVYDYYQDPPKLLGIKIDPSKTPGENIDHYFKKFKKCTNRIKK
LGTEIKKTRQEISYLEGLLFQVDEAAKLEELKDIRQELMEQGYLKKQTKDREKAPRGSEGDFIKYTSSDGFTIMVGKNNK
QNDRLTLKKASKNDTWFHTKEIAGTHVIVKGDNIPEATILEAAQVAAYHSKARNSENVPVDYTQIKNVRKPKGAKPGMVI
YDNHKTLYVDPKLPQTDSN

Sequences:

>Translated_579_residues
MPIDGFTIRGIVGELQKIIGSKINQIHQPQKEVITLKLYGRSGQNTLLLSAHPKYCRVNLTEKKLENPASPSSFCMFLRK
FLVGGKITDIVQYHGDRIVDIHIKRRDEFDLTEEFLLTCEIMGKHSNVILVNKKTKRIMDALRRIQRELSASDQRELVPG
TLFERPPAPDKLDPFSENLDKDKFNKLLSQYQNQIDKLFFDNFLGVSPFLSKQIINTTYPEGVEANELYNIWEKIINDIM
SLSYQPVIVYDKTTTEMKDVYWDNRFYNTDNFKLVEYDTLNQAIDDFAHYKGQEELAKQLKSQLKKKLSGAAKKARKKLK
KQTKEYETSEGGTKYKKYGELLSANYHLVNNAHTETVEVYDYYQDPPKLLGIKIDPSKTPGENIDHYFKKFKKCTNRIKK
LGTEIKKTRQEISYLEGLLFQVDEAAKLEELKDIRQELMEQGYLKKQTKDREKAPRGSEGDFIKYTSSDGFTIMVGKNNK
QNDRLTLKKASKNDTWFHTKEIAGTHVIVKGDNIPEATILEAAQVAAYHSKARNSENVPVDYTQIKNVRKPKGAKPGMVI
YDNHKTLYVDPKLPQTDSN
>Mature_578_residues
PIDGFTIRGIVGELQKIIGSKINQIHQPQKEVITLKLYGRSGQNTLLLSAHPKYCRVNLTEKKLENPASPSSFCMFLRKF
LVGGKITDIVQYHGDRIVDIHIKRRDEFDLTEEFLLTCEIMGKHSNVILVNKKTKRIMDALRRIQRELSASDQRELVPGT
LFERPPAPDKLDPFSENLDKDKFNKLLSQYQNQIDKLFFDNFLGVSPFLSKQIINTTYPEGVEANELYNIWEKIINDIMS
LSYQPVIVYDKTTTEMKDVYWDNRFYNTDNFKLVEYDTLNQAIDDFAHYKGQEELAKQLKSQLKKKLSGAAKKARKKLKK
QTKEYETSEGGTKYKKYGELLSANYHLVNNAHTETVEVYDYYQDPPKLLGIKIDPSKTPGENIDHYFKKFKKCTNRIKKL
GTEIKKTRQEISYLEGLLFQVDEAAKLEELKDIRQELMEQGYLKKQTKDREKAPRGSEGDFIKYTSSDGFTIMVGKNNKQ
NDRLTLKKASKNDTWFHTKEIAGTHVIVKGDNIPEATILEAAQVAAYHSKARNSENVPVDYTQIKNVRKPKGAKPGMVIY
DNHKTLYVDPKLPQTDSN

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 66763; Mature: 66632

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIDGFTIRGIVGELQKIIGSKINQIHQPQKEVITLKLYGRSGQNTLLLSAHPKYCRVNL
CCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCEEEEECCCCEEEECC
TEKKLENPASPSSFCMFLRKFLVGGKITDIVQYHGDRIVDIHIKRRDEFDLTEEFLLTCE
CHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHH
IMGKHSNVILVNKKTKRIMDALRRIQRELSASDQRELVPGTLFERPPAPDKLDPFSENLD
EECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHCCC
KDKFNKLLSQYQNQIDKLFFDNFLGVSPFLSKQIINTTYPEGVEANELYNIWEKIINDIM
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
SLSYQPVIVYDKTTTEMKDVYWDNRFYNTDNFKLVEYDTLNQAIDDFAHYKGQEELAKQL
HCCCCCEEEECCCCHHHHHHHCCCCEECCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHH
KSQLKKKLSGAAKKARKKLKKQTKEYETSEGGTKYKKYGELLSANYHLVNNAHTETVEVY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCEEEEE
DYYQDPPKLLGIKIDPSKTPGENIDHYFKKFKKCTNRIKKLGTEIKKTRQEISYLEGLLF
ECCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVDEAAKLEELKDIRQELMEQGYLKKQTKDREKAPRGSEGDFIKYTSSDGFTIMVGKNNK
HHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCC
QNDRLTLKKASKNDTWFHTKEIAGTHVIVKGDNIPEATILEAAQVAAYHSKARNSENVPV
CCCCEEEEECCCCCCEEEEHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
DYTQIKNVRKPKGAKPGMVIYDNHKTLYVDPKLPQTDSN
CHHHHHCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCC
>Mature Secondary Structure 
PIDGFTIRGIVGELQKIIGSKINQIHQPQKEVITLKLYGRSGQNTLLLSAHPKYCRVNL
CCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCEEEEECCCCEEEECC
TEKKLENPASPSSFCMFLRKFLVGGKITDIVQYHGDRIVDIHIKRRDEFDLTEEFLLTCE
CHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHH
IMGKHSNVILVNKKTKRIMDALRRIQRELSASDQRELVPGTLFERPPAPDKLDPFSENLD
EECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHCCC
KDKFNKLLSQYQNQIDKLFFDNFLGVSPFLSKQIINTTYPEGVEANELYNIWEKIINDIM
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
SLSYQPVIVYDKTTTEMKDVYWDNRFYNTDNFKLVEYDTLNQAIDDFAHYKGQEELAKQL
HCCCCCEEEECCCCHHHHHHHCCCCEECCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHH
KSQLKKKLSGAAKKARKKLKKQTKEYETSEGGTKYKKYGELLSANYHLVNNAHTETVEVY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCEEEEE
DYYQDPPKLLGIKIDPSKTPGENIDHYFKKFKKCTNRIKKLGTEIKKTRQEISYLEGLLF
ECCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVDEAAKLEELKDIRQELMEQGYLKKQTKDREKAPRGSEGDFIKYTSSDGFTIMVGKNNK
HHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCC
QNDRLTLKKASKNDTWFHTKEIAGTHVIVKGDNIPEATILEAAQVAAYHSKARNSENVPV
CCCCEEEEECCCCCCEEEEHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
DYTQIKNVRKPKGAKPGMVIYDNHKTLYVDPKLPQTDSN
CHHHHHCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]