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The map label for this gene is secF [H]

Identifier: 188585912

GI number: 188585912

Start: 1355480

End: 1356397

Strand: Direct

Name: secF [H]

Synonym: Nther_1286

Alternate gene names: 188585912

Gene position: 1355480-1356397 (Clockwise)

Preceding gene: 188585911

Following gene: 188585913

Centisome position: 42.82

GC content: 35.62

Gene sequence:

>918_bases
TTGGAATACAAAGGGGTTAGAGCTATGGAAATAATAACAAATCGCAAAATTTGGTTTATAGTTTCATTGGTAATATTGGT
GATTGGTTTAGGATCTCTGATGTTTAATGGATTAAATGTGGGGATTGACTTTACAGGAGGAACTCTACTTCACATCAAAA
TAGGTGAAGACTATCAGGTATCAGAAGTGCGAGATATCATGGGAGAACACGGTTTAGAAGATAGTGTTATTCAAGAAGCT
GGTGGTGATGAAGCTGAAGAGAGAGAAGTTATTATCAGGACAGTTTCATTAAATGAAGAGGCACGCAATGAAATTATTGA
CAGTTTTCGGGATAGCTGGCCGGAATCAGAGGTTTTAAGAACTGATAATGTGGGTGGAACAATCGGATCTGAATTGCGTT
CAGAAGCGTTTTGGGCTTTATTAATTGCCTCCTTAGGGATGATTGCTTTTATTAGCTATCGCTTTGAGTATAGATTTGCT
TTAGCAGCTATTGCGGCCATAATTCACGACGCTTTCATTGTTTTGGCTGTTTTTTCAATATTTCAGATTGAAATTAATGA
GCCTTTTATTGCAGCTATACTGACTATCATTGGGTATTCAGTGAATGACACTATTGTGGTTTTTGATAGAATTAGAGAAA
CTCTTAAGTTCGAAAAGAAATTGACTCTTTTTGAAACTATCCAAATTAGTATTAAAAGAACGCTAAAAAGATCCTTATGT
ACTTCAATTACAACTTTATTAGTTTTAATTAGCTTGTTTATTTTTGCAGGAGTAACTATAAGGCCGCTTATAATTGCTCT
GTTAATTGGTGTGATCAGCGGAACCTATTCTTCCATTTTCGTAGCTGCGAATGTATGGTCAATTTTGACTGAAAAATTAG
CCCCCGGGCTTAGTCAAAAAAATAAACAGACAGCGTAA

Upstream 100 bases:

>100_bases
TCAACTGGAATAATTGCAAGTATGATTACTGCAGTCTTGTTTACGAGAGTGATCTTAAAACTGCTGGTGTCTAGCAGATT
AATTAGAGATACTAAGTATT

Downstream 100 bases:

>100_bases
AATCTCTACTTTGCACCTTTGAGTTTGTAATCTAAAGATTAACAGCTAAACAGTTTAATTATGAGTGTGGGGGATTTATT
ATGGATGGACAGGCAGTTAA

Product: protein-export membrane protein SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MEYKGVRAMEIITNRKIWFIVSLVILVIGLGSLMFNGLNVGIDFTGGTLLHIKIGEDYQVSEVRDIMGEHGLEDSVIQEA
GGDEAEEREVIIRTVSLNEEARNEIIDSFRDSWPESEVLRTDNVGGTIGSELRSEAFWALLIASLGMIAFISYRFEYRFA
LAAIAAIIHDAFIVLAVFSIFQIEINEPFIAAILTIIGYSVNDTIVVFDRIRETLKFEKKLTLFETIQISIKRTLKRSLC
TSITTLLVLISLFIFAGVTIRPLIIALLIGVISGTYSSIFVAANVWSILTEKLAPGLSQKNKQTA

Sequences:

>Translated_305_residues
MEYKGVRAMEIITNRKIWFIVSLVILVIGLGSLMFNGLNVGIDFTGGTLLHIKIGEDYQVSEVRDIMGEHGLEDSVIQEA
GGDEAEEREVIIRTVSLNEEARNEIIDSFRDSWPESEVLRTDNVGGTIGSELRSEAFWALLIASLGMIAFISYRFEYRFA
LAAIAAIIHDAFIVLAVFSIFQIEINEPFIAAILTIIGYSVNDTIVVFDRIRETLKFEKKLTLFETIQISIKRTLKRSLC
TSITTLLVLISLFIFAGVTIRPLIIALLIGVISGTYSSIFVAANVWSILTEKLAPGLSQKNKQTA
>Mature_305_residues
MEYKGVRAMEIITNRKIWFIVSLVILVIGLGSLMFNGLNVGIDFTGGTLLHIKIGEDYQVSEVRDIMGEHGLEDSVIQEA
GGDEAEEREVIIRTVSLNEEARNEIIDSFRDSWPESEVLRTDNVGGTIGSELRSEAFWALLIASLGMIAFISYRFEYRFA
LAAIAAIIHDAFIVLAVFSIFQIEINEPFIAAILTIIGYSVNDTIVVFDRIRETLKFEKKLTLFETIQISIKRTLKRSLC
TSITTLLVLISLFIFAGVTIRPLIIALLIGVISGTYSSIFVAANVWSILTEKLAPGLSQKNKQTA

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=288, Percent_Identity=32.6388888888889, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 33914; Mature: 33914

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYKGVRAMEIITNRKIWFIVSLVILVIGLGSLMFNGLNVGIDFTGGTLLHIKIGEDYQV
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCH
SEVRDIMGEHGLEDSVIQEAGGDEAEEREVIIRTVSLNEEARNEIIDSFRDSWPESEVLR
HHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHC
TDNVGGTIGSELRSEAFWALLIASLGMIAFISYRFEYRFALAAIAAIIHDAFIVLAVFSI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQIEINEPFIAAILTIIGYSVNDTIVVFDRIRETLKFEKKLTLFETIQISIKRTLKRSLC
HHHCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSITTLLVLISLFIFAGVTIRPLIIALLIGVISGTYSSIFVAANVWSILTEKLAPGLSQK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCC
NKQTA
CCCCC
>Mature Secondary Structure
MEYKGVRAMEIITNRKIWFIVSLVILVIGLGSLMFNGLNVGIDFTGGTLLHIKIGEDYQV
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCH
SEVRDIMGEHGLEDSVIQEAGGDEAEEREVIIRTVSLNEEARNEIIDSFRDSWPESEVLR
HHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHC
TDNVGGTIGSELRSEAFWALLIASLGMIAFISYRFEYRFALAAIAAIIHDAFIVLAVFSI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQIEINEPFIAAILTIIGYSVNDTIVVFDRIRETLKFEKKLTLFETIQISIKRTLKRSLC
HHHCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSITTLLVLISLFIFAGVTIRPLIIALLIGVISGTYSSIFVAANVWSILTEKLAPGLSQK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCC
NKQTA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]