| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585871
Identifier: 188585871
GI number: 188585871
Start: 1313715
End: 1315307
Strand: Direct
Name: 188585871
Synonym: Nther_1245
Alternate gene names: NA
Gene position: 1313715-1315307 (Clockwise)
Preceding gene: 188585870
Following gene: 188585872
Centisome position: 41.5
GC content: 32.14
Gene sequence:
>1593_bases ATGGCAGTCAAAACCTCTAGTAAGAAGAAACTAGATAAAGTCTTAAATAACTTTGAGTTATATGCCAAGAACTTTATGAA GGTAGTTGATATAACAGGTGAAGAAGTTCCCTTAACATTAAACGAAGAACAGAGATACCTTTACAGGAACATGGATAAAT ATAATATTTGTCTAAAATCCCGACAGTTAGGAATAACTACACTTAGTTGTGCTTATTCAGTCTATTTAGCATGTACTAGG AAAAATGTTACTTCAATGATTGTCAGTTATAATCTTGAAAGTACACAAGAGATTTTTAATAAACTAAAAAGCATTTATAA TAGTATTCCCGATGATGAGAGAATCAAGCCAAAGGAGTTAAGAAATAACAGATATGAATTGTTACTTGAAAATGGTAGCA AGGTACTTGTAAAAACAGCAGGGTATAAAGAGCTATCACGTGGTTTAACTTTGAGTTTTGCCCACCTATCAGAATACGCT TTTTGGAATGAGTGGGTACAAACAAAAGGATTAATGGGTTTAGAACAGTCCTTAATGAAGTCAGATGAACCTGGGAAAGG TCAAATAATAATTGAAAGTACCGCCAATGGTCTTAACAAATTTTACGAGCTTTTTAAATCAGCAGAGAAGGGTAACAGTA AATACAAACCCTTCTTTTTTAATTGGATAGACAATAAAAAGCAGTTTGCTAGTGAATATGATATTGCTGAAAAGTGGTAT AAGTCTATCAATAAAGGAAATAGATTAACAACAAAAGATTTAACAGATGAAACGTCAAAAAAATTGTACTATGAAAAAGG TGCTAATTTAAAACAGATAATGTGGCGTTATTGGAAGTTACAGGATATGACAGAAGAAGAATTCTGTCAGGAATATCCCT CACATTCTGAACAGGCATTTATAAGTAGTCAGAAGTCAATATTTGATACTGAAATGATTGTTAAAAGATTAGATAATTTA CTTCCACCATTGCCAAAGGAAGAACTAGCTGATCTGCCTAGTAAACTAAAAAAATATCTTAACAATGGATTGGATATTTA CAATAGACCAAAGAGAGAACGCCATTTTGCAGGTGTTGATGTTGCTAGTGGTTCTGGTGCTGATTATTCTTCAATCATAG TTCTAAACAAAGATGGTGAACAAGTTGCTAGTTTTTATAGAAATGATGTACCAGTCCATGAGTTTGCTGAAATAGTTAAC GAGCTAGGCAGGTATTTTAGTTATGCTTATACCTGTATAGAAAGAAATTCATACGGACTCCCATTAATTGAAAGACTAAG AGAAAGGCATCAATATATGAACTTATACAAGATGAAAACATTTGACCAAAGAGGTAAAAAGAAAAAACAGTTGGGATGGT TAACTACAAACGCATCTAAAAGCATTATGATAACGGACTTAAAAGAGTTATTTGAGAAAGGGTTAATTAATATTAACTGT CAAAGAACACTTGAAGAAATGAGGATATTTGAAGTTAGAGAAGATGGAAGTACAGGAAACAAGCAAGGAGAAGAAAACCA TGATGATATGGTGATTGCTCTAGCTTTAAGTGTGGTTGCTTTAAAAGATAATAAATATTTTGTAAAGATATAA
Upstream 100 bases:
>100_bases AGTTTTTTCAAAACCTGCTAACAATTAAAATATATTAAGTTTAGAAGGGGCTACCTCTAGGTATTCCCTTCTTTTTTATG TTTAAGGTGGTGAAACTAAT
Downstream 100 bases:
>100_bases TTTAACAACAAAGGGGTAAACCACTTGATTTCTAGTTTTGACTGTCTTATACTAGAGATATAACGGACTAATAAGAAAGT GGTTTACTTAGCAGTGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MAVKTSSKKKLDKVLNNFELYAKNFMKVVDITGEEVPLTLNEEQRYLYRNMDKYNICLKSRQLGITTLSCAYSVYLACTR KNVTSMIVSYNLESTQEIFNKLKSIYNSIPDDERIKPKELRNNRYELLLENGSKVLVKTAGYKELSRGLTLSFAHLSEYA FWNEWVQTKGLMGLEQSLMKSDEPGKGQIIIESTANGLNKFYELFKSAEKGNSKYKPFFFNWIDNKKQFASEYDIAEKWY KSINKGNRLTTKDLTDETSKKLYYEKGANLKQIMWRYWKLQDMTEEEFCQEYPSHSEQAFISSQKSIFDTEMIVKRLDNL LPPLPKEELADLPSKLKKYLNNGLDIYNRPKRERHFAGVDVASGSGADYSSIIVLNKDGEQVASFYRNDVPVHEFAEIVN ELGRYFSYAYTCIERNSYGLPLIERLRERHQYMNLYKMKTFDQRGKKKKQLGWLTTNASKSIMITDLKELFEKGLININC QRTLEEMRIFEVREDGSTGNKQGEENHDDMVIALALSVVALKDNKYFVKI
Sequences:
>Translated_530_residues MAVKTSSKKKLDKVLNNFELYAKNFMKVVDITGEEVPLTLNEEQRYLYRNMDKYNICLKSRQLGITTLSCAYSVYLACTR KNVTSMIVSYNLESTQEIFNKLKSIYNSIPDDERIKPKELRNNRYELLLENGSKVLVKTAGYKELSRGLTLSFAHLSEYA FWNEWVQTKGLMGLEQSLMKSDEPGKGQIIIESTANGLNKFYELFKSAEKGNSKYKPFFFNWIDNKKQFASEYDIAEKWY KSINKGNRLTTKDLTDETSKKLYYEKGANLKQIMWRYWKLQDMTEEEFCQEYPSHSEQAFISSQKSIFDTEMIVKRLDNL LPPLPKEELADLPSKLKKYLNNGLDIYNRPKRERHFAGVDVASGSGADYSSIIVLNKDGEQVASFYRNDVPVHEFAEIVN ELGRYFSYAYTCIERNSYGLPLIERLRERHQYMNLYKMKTFDQRGKKKKQLGWLTTNASKSIMITDLKELFEKGLININC QRTLEEMRIFEVREDGSTGNKQGEENHDDMVIALALSVVALKDNKYFVKI >Mature_529_residues AVKTSSKKKLDKVLNNFELYAKNFMKVVDITGEEVPLTLNEEQRYLYRNMDKYNICLKSRQLGITTLSCAYSVYLACTRK NVTSMIVSYNLESTQEIFNKLKSIYNSIPDDERIKPKELRNNRYELLLENGSKVLVKTAGYKELSRGLTLSFAHLSEYAF WNEWVQTKGLMGLEQSLMKSDEPGKGQIIIESTANGLNKFYELFKSAEKGNSKYKPFFFNWIDNKKQFASEYDIAEKWYK SINKGNRLTTKDLTDETSKKLYYEKGANLKQIMWRYWKLQDMTEEEFCQEYPSHSEQAFISSQKSIFDTEMIVKRLDNLL PPLPKEELADLPSKLKKYLNNGLDIYNRPKRERHFAGVDVASGSGADYSSIIVLNKDGEQVASFYRNDVPVHEFAEIVNE LGRYFSYAYTCIERNSYGLPLIERLRERHQYMNLYKMKTFDQRGKKKKQLGWLTTNASKSIMITDLKELFEKGLININCQ RTLEEMRIFEVREDGSTGNKQGEENHDDMVIALALSVVALKDNKYFVKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61748; Mature: 61617
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKTSSKKKLDKVLNNFELYAKNFMKVVDITGEEVPLTLNEEQRYLYRNMDKYNICLKS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCHHHEEECC RQLGITTLSCAYSVYLACTRKNVTSMIVSYNLESTQEIFNKLKSIYNSIPDDERIKPKEL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH RNNRYELLLENGSKVLVKTAGYKELSRGLTLSFAHLSEYAFWNEWVQTKGLMGLEQSLMK CCCCEEEEEECCCEEEEEECCHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHC SDEPGKGQIIIESTANGLNKFYELFKSAEKGNSKYKPFFFNWIDNKKQFASEYDIAEKWY CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH KSINKGNRLTTKDLTDETSKKLYYEKGANLKQIMWRYWKLQDMTEEEFCQEYPSHSEQAF HHHCCCCCEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHH ISSQKSIFDTEMIVKRLDNLLPPLPKEELADLPSKLKKYLNNGLDIYNRPKRERHFAGVD HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCE VASGSGADYSSIIVLNKDGEQVASFYRNDVPVHEFAEIVNELGRYFSYAYTCIERNSYGL ECCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLIERLRERHQYMNLYKMKTFDQRGKKKKQLGWLTTNASKSIMITDLKELFEKGLININC HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCEEHHHHHHHHHCCCEEEEH QRTLEEMRIFEVREDGSTGNKQGEENHDDMVIALALSVVALKDNKYFVKI HHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEC >Mature Secondary Structure AVKTSSKKKLDKVLNNFELYAKNFMKVVDITGEEVPLTLNEEQRYLYRNMDKYNICLKS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCHHHEEECC RQLGITTLSCAYSVYLACTRKNVTSMIVSYNLESTQEIFNKLKSIYNSIPDDERIKPKEL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH RNNRYELLLENGSKVLVKTAGYKELSRGLTLSFAHLSEYAFWNEWVQTKGLMGLEQSLMK CCCCEEEEEECCCEEEEEECCHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHC SDEPGKGQIIIESTANGLNKFYELFKSAEKGNSKYKPFFFNWIDNKKQFASEYDIAEKWY CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH KSINKGNRLTTKDLTDETSKKLYYEKGANLKQIMWRYWKLQDMTEEEFCQEYPSHSEQAF HHHCCCCCEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHH ISSQKSIFDTEMIVKRLDNLLPPLPKEELADLPSKLKKYLNNGLDIYNRPKRERHFAGVD HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCE VASGSGADYSSIIVLNKDGEQVASFYRNDVPVHEFAEIVNELGRYFSYAYTCIERNSYGL ECCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLIERLRERHQYMNLYKMKTFDQRGKKKKQLGWLTTNASKSIMITDLKELFEKGLININC HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCEEHHHHHHHHHCCCEEEEH QRTLEEMRIFEVREDGSTGNKQGEENHDDMVIALALSVVALKDNKYFVKI HHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA