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The map label for this gene is cbiX [H]

Identifier: 188585556

GI number: 188585556

Start: 986031

End: 986408

Strand: Reverse

Name: cbiX [H]

Synonym: Nther_0928

Alternate gene names: 188585556

Gene position: 986408-986031 (Counterclockwise)

Preceding gene: 188585576

Following gene: 188585555

Centisome position: 31.16

GC content: 34.13

Gene sequence:

>378_bases
ATGGAAATTAATATTATATTAGGACATGGAAGTCGAAATCCGGAAGCTAATGAAGTATTAAAAACTCTAGCCACAATGTA
CAGGGAAAATAATCACACTGACACAAGTTATGCCTTTTTACAATTTGCCAGCCCCACATTAGAAGAGGTCTTAGAAGATG
CAATTTCTAAAAAATATCAAACTATTGTAATTGCACCAGTATTTTTATATCCAGGAGTACATATTAAAAAAGATATCCCA
GAAAAACTCGAAAAGTACCGCCGTGAGAATCCTGAGAAGACCTTTATTCTGGCAAATCCTATCGGAGAAGATCCTAGATT
AATTAAAATCATAGAAAATAGAATAGCTTCTGCCAAAGGGAGTCAGAAGAATGACTAA

Upstream 100 bases:

>100_bases
TATGATTTAATGTTATAATTTCTATAAATTTTATCAACCTTAAGAGATTGGTACATAATTTCTTAGGGTTTGTAAATCCA
TTTAACTGGAGGGTGATACT

Downstream 100 bases:

>100_bases
ACTACAACCGCAAGAAATAGAAACTAAAAGTATGGAAATCATTCAAAATAAAGTAAATCTATCTGCTTTTAGTCAAAAAG
AATTACCCGTAGTTATGAGA

Product: cobalamin (vitamin B12) biosynthesis CbiX protein

Products: NA

Alternate protein names: CbiXS [H]

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MEINIILGHGSRNPEANEVLKTLATMYRENNHTDTSYAFLQFASPTLEEVLEDAISKKYQTIVIAPVFLYPGVHIKKDIP
EKLEKYRRENPEKTFILANPIGEDPRLIKIIENRIASAKGSQKND

Sequences:

>Translated_125_residues
MEINIILGHGSRNPEANEVLKTLATMYRENNHTDTSYAFLQFASPTLEEVLEDAISKKYQTIVIAPVFLYPGVHIKKDIP
EKLEKYRRENPEKTFILANPIGEDPRLIKIIENRIASAKGSQKND
>Mature_125_residues
MEINIILGHGSRNPEANEVLKTLATMYRENNHTDTSYAFLQFASPTLEEVLEDAISKKYQTIVIAPVFLYPGVHIKKDIP
EKLEKYRRENPEKTFILANPIGEDPRLIKIIENRIASAKGSQKND

Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. CbiXS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.3 [H]

Molecular weight: Translated: 14252; Mature: 14252

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50197 BEACH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEINIILGHGSRNPEANEVLKTLATMYRENNHTDTSYAFLQFASPTLEEVLEDAISKKYQ
CEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHC
TIVIAPVFLYPGVHIKKDIPEKLEKYRRENPEKTFILANPIGEDPRLIKIIENRIASAKG
EEEEEHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
SQKND
CCCCC
>Mature Secondary Structure
MEINIILGHGSRNPEANEVLKTLATMYRENNHTDTSYAFLQFASPTLEEVLEDAISKKYQ
CEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHC
TIVIAPVFLYPGVHIKKDIPEKLEKYRRENPEKTFILANPIGEDPRLIKIIENRIASAKG
EEEEEHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC
SQKND
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]