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The map label for this gene is pdaD [H]

Identifier: 188585514

GI number: 188585514

Start: 933692

End: 934168

Strand: Reverse

Name: pdaD [H]

Synonym: Nther_0886

Alternate gene names: 188585514

Gene position: 934168-933692 (Counterclockwise)

Preceding gene: 188585517

Following gene: 188585510

Centisome position: 29.51

GC content: 37.53

Gene sequence:

>477_bases
ATGGCAGTAGATTTAAAAACTTTAAAATACTTCAAATTGGTAACCGGAACAGGTGAGGGCAATACCTCATTAACAGCTTT
TGATAAAGCTCTCTTAAATGCAGAAGTCGGTAATTTCAATTTATTAAAAGTAACTAGTATTCTCCCAGCTAGAGTTAAAC
AAAAGGATAAAATCACTGTTTCCGAGGGAGGAATCCTCCCTATTGCATACGGGTCAGTCACTAGCTGTAATTCCGGAGAA
ATCATTTCATCGGCGGTAGCAGTAGGAATCCCAGCTTCTTCCAGGGCTCATGGAATGATAGTAGAAACTTCAGGATACAG
ACCTAAAGAACAATCTCTTAAAATCGCAGAAAATATGATAGCTGAGACCTTTGAAAATCGAGGTTTAGAGCTACAAGAAG
TATTAACCAAAGGTTCCGAACTAAAAATAAGAGATATAAGCTGTGGAAGTGTTTTTTCAGGTGTAGCACTCTTTTAA

Upstream 100 bases:

>100_bases
TACAGGACAATTTGTGATAACGGAATAAGTAGCAAGTGAGTCAATAAAGCATTTTTCAGAATATAATATAGTGATTAAAT
TACAGGGAGGGAATCACAGA

Downstream 100 bases:

>100_bases
TTAAACAGGAAGGCTGTCCAAAATTACATTAAGGACAGCCTTCCTGTTGGTGTTATTTATTGGTTACTTATTATAATTTT
GTTTATAATGTTGTTTTAAT

Product: Pyruvoyl-dependent arginine decarboxylase

Products: NA

Alternate protein names: PvlArgDC [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAVDLKTLKYFKLVTGTGEGNTSLTAFDKALLNAEVGNFNLLKVTSILPARVKQKDKITVSEGGILPIAYGSVTSCNSGE
IISSAVAVGIPASSRAHGMIVETSGYRPKEQSLKIAENMIAETFENRGLELQEVLTKGSELKIRDISCGSVFSGVALF

Sequences:

>Translated_158_residues
MAVDLKTLKYFKLVTGTGEGNTSLTAFDKALLNAEVGNFNLLKVTSILPARVKQKDKITVSEGGILPIAYGSVTSCNSGE
IISSAVAVGIPASSRAHGMIVETSGYRPKEQSLKIAENMIAETFENRGLELQEVLTKGSELKIRDISCGSVFSGVALF
>Mature_157_residues
AVDLKTLKYFKLVTGTGEGNTSLTAFDKALLNAEVGNFNLLKVTSILPARVKQKDKITVSEGGILPIAYGSVTSCNSGEI
ISSAVAVGIPASSRAHGMIVETSGYRPKEQSLKIAENMIAETFENRGLELQEVLTKGSELKIRDISCGSVFSGVALF

Specific function: Unknown

COG id: COG1945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pdaD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016104
- InterPro:   IPR016105
- InterPro:   IPR002724
- ProDom:   PD010449 [H]

Pfam domain/function: PF01862 PvlArgDC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 16771; Mature: 16639

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDLKTLKYFKLVTGTGEGNTSLTAFDKALLNAEVGNFNLLKVTSILPARVKQKDKITV
CCCCCHHEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEHHCHHHCCCCCEEEE
SEGGILPIAYGSVTSCNSGEIISSAVAVGIPASSRAHGMIVETSGYRPKEQSLKIAENMI
CCCCEEEEECCCCCCCCCCCHHHHHEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
AETFENRGLELQEVLTKGSELKIRDISCGSVFSGVALF
HHHHHHCCCCHHHHHCCCCCEEEEECCCCCHHCCEECC
>Mature Secondary Structure 
AVDLKTLKYFKLVTGTGEGNTSLTAFDKALLNAEVGNFNLLKVTSILPARVKQKDKITV
CCCCHHEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEHHCHHHCCCCCEEEE
SEGGILPIAYGSVTSCNSGEIISSAVAVGIPASSRAHGMIVETSGYRPKEQSLKIAENMI
CCCCEEEEECCCCCCCCCCCHHHHHEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
AETFENRGLELQEVLTKGSELKIRDISCGSVFSGVALF
HHHHHHCCCCHHHHHCCCCCEEEEECCCCCHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA