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The map label for this gene is opuAC [H]

Identifier: 188585517

GI number: 188585517

Start: 936537

End: 937490

Strand: Reverse

Name: opuAC [H]

Synonym: Nther_0889

Alternate gene names: 188585517

Gene position: 937490-936537 (Counterclockwise)

Preceding gene: 188585518

Following gene: 188585514

Centisome position: 29.62

GC content: 35.22

Gene sequence:

>954_bases
ATGAAAATTTCAAAAGGTTCAAAAATATTTTTTCTGTTAGGGTTAATTGTTGTAGTAGTTATTTCAGCCAGTGTATACGC
CATAAACAGAAACAATCAGGAAACATTGACAGAAGTGGAATTACCTATTGTTGAATGGCCAGGTGTTACTCAAAAGACCC
ATGTTGTTAGTGAAATTTTAGAAAGCCTTGGATATCAAGTTAATATTAATCAGTACGCACTACCTGTTATTTTAGAAGGC
TTGTCTGAAGGTGATTTGGATGTCTTTACTGGAACTTGGTTTCAAACATGGGGTACTCCCTTAAAAAATAAATTAGCTGA
TGGAAGCGTAGTACATGTAAGTACCCAGCTTGAAGACACTAATTATGGACCAGCTGTGCCATATTATGTGTACGAGGCAG
GAGTTACTTCTCTAGCTGATTTATCAGAGTACTCCGAAGAATTCAATCATACTTATTACGGCTTAGAATCCGGAAATGAT
GGTAATCAGATAATGATTGATGCTTTCGATAACAATATCTATGATCTAGGTGATTGGAAAATAGTAGAGAGTAGTACTGC
AGCCATGATTCAACACGTTCAAAATTACATGAACAATGAAGAATGGATTGTCTTTAGTGGTTGGGAACCCCATTGGATGA
ATGTTGTTTTAGATATGAGATATCTAGACGACCCGGAAGGAATTTGGGGAGAAGATGAAAAAGTAGGAACGATTGCTAGA
AAAGGTTTAAAAGATGATGATCCGAATCTTTACAAGTTTTTTGAGCAGTTTGATATTAATAATGAAATACAAAGTGAATG
GATATATGAATACAGTCGTAAAAACCGAAGTCCTAATGTTGTAGCAAAGGAGTGGGTATCTGAAAACCTTGATTTAGTAT
TAGAATGGGTAGATGGTGTTCACACTGTTGATGGTAGAGATGCTGGAGAAGTACTTAAAGAAATATATAAATAA

Upstream 100 bases:

>100_bases
TAGAATGATATCAGTCCCGCCATAAAAGTCTTGATTATTATTGTAAAAAACTGTATAATAAGTACATCACTTGTTGTGTG
TTATCAAAGGAGGAGAATTG

Downstream 100 bases:

>100_bases
ATTTGAATCCCAAAACTAAAAAAGTAAAACAGGACCTTATTTTCAGGTGAGTCTGTCAAGTAATTGGTGTAAACAATCCG
ATTATGACCTATAGGAACAA

Product: Substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKISKGSKIFFLLGLIVVVVISASVYAINRNNQETLTEVELPIVEWPGVTQKTHVVSEILESLGYQVNINQYALPVILEG
LSEGDLDVFTGTWFQTWGTPLKNKLADGSVVHVSTQLEDTNYGPAVPYYVYEAGVTSLADLSEYSEEFNHTYYGLESGND
GNQIMIDAFDNNIYDLGDWKIVESSTAAMIQHVQNYMNNEEWIVFSGWEPHWMNVVLDMRYLDDPEGIWGEDEKVGTIAR
KGLKDDDPNLYKFFEQFDINNEIQSEWIYEYSRKNRSPNVVAKEWVSENLDLVLEWVDGVHTVDGRDAGEVLKEIYK

Sequences:

>Translated_317_residues
MKISKGSKIFFLLGLIVVVVISASVYAINRNNQETLTEVELPIVEWPGVTQKTHVVSEILESLGYQVNINQYALPVILEG
LSEGDLDVFTGTWFQTWGTPLKNKLADGSVVHVSTQLEDTNYGPAVPYYVYEAGVTSLADLSEYSEEFNHTYYGLESGND
GNQIMIDAFDNNIYDLGDWKIVESSTAAMIQHVQNYMNNEEWIVFSGWEPHWMNVVLDMRYLDDPEGIWGEDEKVGTIAR
KGLKDDDPNLYKFFEQFDINNEIQSEWIYEYSRKNRSPNVVAKEWVSENLDLVLEWVDGVHTVDGRDAGEVLKEIYK
>Mature_317_residues
MKISKGSKIFFLLGLIVVVVISASVYAINRNNQETLTEVELPIVEWPGVTQKTHVVSEILESLGYQVNINQYALPVILEG
LSEGDLDVFTGTWFQTWGTPLKNKLADGSVVHVSTQLEDTNYGPAVPYYVYEAGVTSLADLSEYSEEFNHTYYGLESGND
GNQIMIDAFDNNIYDLGDWKIVESSTAAMIQHVQNYMNNEEWIVFSGWEPHWMNVVLDMRYLDDPEGIWGEDEKVGTIAR
KGLKDDDPNLYKFFEQFDINNEIQSEWIYEYSRKNRSPNVVAKEWVSENLDLVLEWVDGVHTVDGRDAGEVLKEIYK

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 36163; Mature: 36163

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISKGSKIFFLLGLIVVVVISASVYAINRNNQETLTEVELPIVEWPGVTQKTHVVSEIL
CCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHEEECCEEECCCCCHHHHHHHHHH
ESLGYQVNINQYALPVILEGLSEGDLDVFTGTWFQTWGTPLKNKLADGSVVHVSTQLEDT
HHCCCEEEECCCHHHHHHHCCCCCCEEEEECCHHHHCCCCHHHHCCCCCEEEEEEEECCC
NYGPAVPYYVYEAGVTSLADLSEYSEEFNHTYYGLESGNDGNQIMIDAFDNNIYDLGDWK
CCCCCCCEEEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCEEECCCEE
IVESSTAAMIQHVQNYMNNEEWIVFSGWEPHWMNVVLDMRYLDDPEGIWGEDEKVGTIAR
EECHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHH
KGLKDDDPNLYKFFEQFDINNEIQSEWIYEYSRKNRSPNVVAKEWVSENLDLVLEWVDGV
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCC
HTVDGRDAGEVLKEIYK
CCCCCCCHHHHHHHHHC
>Mature Secondary Structure
MKISKGSKIFFLLGLIVVVVISASVYAINRNNQETLTEVELPIVEWPGVTQKTHVVSEIL
CCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHEEECCEEECCCCCHHHHHHHHHH
ESLGYQVNINQYALPVILEGLSEGDLDVFTGTWFQTWGTPLKNKLADGSVVHVSTQLEDT
HHCCCEEEECCCHHHHHHHCCCCCCEEEEECCHHHHCCCCHHHHCCCCCEEEEEEEECCC
NYGPAVPYYVYEAGVTSLADLSEYSEEFNHTYYGLESGNDGNQIMIDAFDNNIYDLGDWK
CCCCCCCEEEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCEEECCCEE
IVESSTAAMIQHVQNYMNNEEWIVFSGWEPHWMNVVLDMRYLDDPEGIWGEDEKVGTIAR
EECHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHH
KGLKDDDPNLYKFFEQFDINNEIQSEWIYEYSRKNRSPNVVAKEWVSENLDLVLEWVDGV
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCC
HTVDGRDAGEVLKEIYK
CCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]