| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585419
Identifier: 188585419
GI number: 188585419
Start: 820963
End: 823506
Strand: Direct
Name: 188585419
Synonym: Nther_0789
Alternate gene names: NA
Gene position: 820963-823506 (Clockwise)
Preceding gene: 188585418
Following gene: 188585420
Centisome position: 25.93
GC content: 31.68
Gene sequence:
>2544_bases ATGGCTTCACTTCATTCTGGCTCTAAACTTAAAGAATTACTAGTTATAGAAACTGATAGATTTACATTGTCAATCAAAGG CTTGCCTGTAAATAAAAATAACGATGGAAAGCTACATAATATCAAGCAAAAAAGAAGTTATGTTAGTGTAGAGTCCTTTG TAGATCAAAGCTATCAAGTGAAGATTTTTGATCCTAAAAGTCCTAGCGGATTAAGACCATATTACTATGAAGGAATGCCC CCGTGTTTTTTTGAGCAAACAAATTATGAAGTAGTTTTGGAAGTTAATGATGGTAACAATGATTATAAACTTACCCATGA TAATCCTCATTTAGATAATGCAGTTACCCCTACAGGAAGTAGTGGTCAGATATATACTGGAGTAATCAATTTCCACAATG ACATCGGGTTTTCACGGTTTGTGCTAGAAGAAAATGGTGTTAAAATTTTTTCTTTTGAAATAGAAGTTTTTCCAAGTAAA TTGGATTATATAGAGGATTTCTATCAGATGCTTCAAGAAGTTAACCAAGAAATTTATAATTTGGCTTTTGATTTTCTTAG AAGGACATATTTTTCTGCACAGATAACAAAAGAAGAAACTCCATCTGAAGCAGAATTTTATACAATAATTTCAGCTATTT TTAAGGAATTTTATAATTCCTTGGAGCGTGTTAAAAATCAACCCCATCATAAAATAGTTCCTTCAAATAAAGTTGTTAGA CCTGAAAAAGCGAAAAAGAATAACAAAGATACTCTTAAATGGCTTCAAAAAAGACCTAATATAATGCAAAAGAGTTCTCA TTCTGGCATAGCTATTAACAATAACAATTACATTCCAAGAAAAATTTTAGATACTAAAAAAGAATTTAGTTATGATACTT ATGAGAACAGATTTTTGAAGTGGATTCTTCTAGTAATAGATAAAAAATTAAAGAGATTCTCAGAAAAACTGAATAATGAA CAACTAGAAGTTAAAGAAGAAGTACAAAATGAAATTAATAAAATGAGATCTAAACTAAGACACTTTATTAACTATAGTTT TCTACAATTTGCAGGAAGATTAACTAGATTAGAAAGTAGTTCCTTAGTGATGCAGATGGGACAAGGATATCGTGATGTTT ATAAATATTACCTTATGATGAAAAAAGGCTTAAATCTAACCTCTGATTTTTTCGATATTTCAATAAAAGATGTGGCTTTA CTTTATGAGTACTGGTGCTTTTTAAAGTTAAATTCTCTACTTAGAAATAAGTATCAACTGGAATACAATGATCTAATTAG CTTAGATAGATCTGGGATTATAGTGAAATTAAAGAAGGGAAGGGAATCCCAGTTAACCTATCGAGATCCTAAAACAAACG AACAGTTTACTGTAGCTTATAATAGGGCTTTTAACAACTTGCCTACTGTTGGTCAACATCCAGATAACATCCTGTCTATA AAGAAAAGTGACTCAAATGTCCGCTATCAGTACATTTTCGATGCAAAATATCGACTGGATACAAGTATTGAATATAAACA GAAGTTTAATCAAATCGGACCACCAGTAGATACCATTAATGCTATGCATCGTTATCGTGACGCTATAGTAGCTAATAACA AACATAAAGAAGATTATACTAGGGATATTTTCGGAGCTTTTGTACTATTTCCTCATAATAATGAACAGAAATTTGCGGGA TTAGAAGGCGGGAAGCCAAGCAAGTTTTATGATAGTATTTCTGAAATTAGTATTGGAGCTTTACCATTCTTACCAAGTCA AGCTAAACTAGTAAAATCTTTTCTTGATGATTTATTACTAGAGTCATCAGATACTGCTTTTGAGCGTTCTGTAATACAAC AGGGAACTAGAAATTACTTCGATAAACAACAACAAATTAGCGATGTCCTTATTGGACCTCTAAGACGAGCAGAACAACTT GAATTGTGTTTAAACAATAATATGTACTATACCTACCTTGATCAGGTTAAAAATCAACTTGGTTTACTTCGATATATTGC ACTCTACCAATCAAAGCGGAAATTTCAGAACCAACAAGAACAAGGGATTTTCTACTATGGAAAAATACAAGAGTATTATA TTATTCCTAGAAAAGAAATCAAAGAGGTTAAAGCAGCCTCACAACCTAATGAATTAGCTGTTAAATTTATAGTTGATGAA TGGAAAAAACTTGATAAACCTATAAAGCCTCAAGGTTATGGTCCTCAGGGTCCGCAATTTACTAACTGGTACCTCTTTAG AGAGGCTGAAACGTATCCAGAACTTCATCTGACTTGGGAAGAGATGCGGTTGTTGAAAGAGCTGAGACGTATAGAAAACC AAGCCCAATTTAAGTTTCCTACAGAGATGATTAAATCTGATGAACGATTTGAACTTATTGAATTTCCCGAGTTGATCATA GAAAGAGTAGATCAAGAAAGATTCAAGGTTATTACTGATTATGATGAAGAAATTTTTAAGTTTCAAGATCTGCGAGGTCA AGCAAGAGTAATATTGAAAAATATAATAGAGATATGGAAATTGGGGGTTAGTAATAAAAAATAA
Upstream 100 bases:
>100_bases AAAATTGAATCCGTATTAAAAGAACTGATAGAACTGTGTTCAGACAGTTTGCCACACAGTAAAGAAAAAGCAGAATTTAT GTTAGAAAGGTTTGAAGAAG
Downstream 100 bases:
>100_bases ATCGACTTTTAAATCTTAATAATTTCAAGTCGATGATTTTTTTCGGTTCACTCCTTAAAATGAAAGAAAATTTTAACTAT TATTCCAGGAATTTTAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 847; Mature: 846
Protein sequence:
>847_residues MASLHSGSKLKELLVIETDRFTLSIKGLPVNKNNDGKLHNIKQKRSYVSVESFVDQSYQVKIFDPKSPSGLRPYYYEGMP PCFFEQTNYEVVLEVNDGNNDYKLTHDNPHLDNAVTPTGSSGQIYTGVINFHNDIGFSRFVLEENGVKIFSFEIEVFPSK LDYIEDFYQMLQEVNQEIYNLAFDFLRRTYFSAQITKEETPSEAEFYTIISAIFKEFYNSLERVKNQPHHKIVPSNKVVR PEKAKKNNKDTLKWLQKRPNIMQKSSHSGIAINNNNYIPRKILDTKKEFSYDTYENRFLKWILLVIDKKLKRFSEKLNNE QLEVKEEVQNEINKMRSKLRHFINYSFLQFAGRLTRLESSSLVMQMGQGYRDVYKYYLMMKKGLNLTSDFFDISIKDVAL LYEYWCFLKLNSLLRNKYQLEYNDLISLDRSGIIVKLKKGRESQLTYRDPKTNEQFTVAYNRAFNNLPTVGQHPDNILSI KKSDSNVRYQYIFDAKYRLDTSIEYKQKFNQIGPPVDTINAMHRYRDAIVANNKHKEDYTRDIFGAFVLFPHNNEQKFAG LEGGKPSKFYDSISEISIGALPFLPSQAKLVKSFLDDLLLESSDTAFERSVIQQGTRNYFDKQQQISDVLIGPLRRAEQL ELCLNNNMYYTYLDQVKNQLGLLRYIALYQSKRKFQNQQEQGIFYYGKIQEYYIIPRKEIKEVKAASQPNELAVKFIVDE WKKLDKPIKPQGYGPQGPQFTNWYLFREAETYPELHLTWEEMRLLKELRRIENQAQFKFPTEMIKSDERFELIEFPELII ERVDQERFKVITDYDEEIFKFQDLRGQARVILKNIIEIWKLGVSNKK
Sequences:
>Translated_847_residues MASLHSGSKLKELLVIETDRFTLSIKGLPVNKNNDGKLHNIKQKRSYVSVESFVDQSYQVKIFDPKSPSGLRPYYYEGMP PCFFEQTNYEVVLEVNDGNNDYKLTHDNPHLDNAVTPTGSSGQIYTGVINFHNDIGFSRFVLEENGVKIFSFEIEVFPSK LDYIEDFYQMLQEVNQEIYNLAFDFLRRTYFSAQITKEETPSEAEFYTIISAIFKEFYNSLERVKNQPHHKIVPSNKVVR PEKAKKNNKDTLKWLQKRPNIMQKSSHSGIAINNNNYIPRKILDTKKEFSYDTYENRFLKWILLVIDKKLKRFSEKLNNE QLEVKEEVQNEINKMRSKLRHFINYSFLQFAGRLTRLESSSLVMQMGQGYRDVYKYYLMMKKGLNLTSDFFDISIKDVAL LYEYWCFLKLNSLLRNKYQLEYNDLISLDRSGIIVKLKKGRESQLTYRDPKTNEQFTVAYNRAFNNLPTVGQHPDNILSI KKSDSNVRYQYIFDAKYRLDTSIEYKQKFNQIGPPVDTINAMHRYRDAIVANNKHKEDYTRDIFGAFVLFPHNNEQKFAG LEGGKPSKFYDSISEISIGALPFLPSQAKLVKSFLDDLLLESSDTAFERSVIQQGTRNYFDKQQQISDVLIGPLRRAEQL ELCLNNNMYYTYLDQVKNQLGLLRYIALYQSKRKFQNQQEQGIFYYGKIQEYYIIPRKEIKEVKAASQPNELAVKFIVDE WKKLDKPIKPQGYGPQGPQFTNWYLFREAETYPELHLTWEEMRLLKELRRIENQAQFKFPTEMIKSDERFELIEFPELII ERVDQERFKVITDYDEEIFKFQDLRGQARVILKNIIEIWKLGVSNKK >Mature_846_residues ASLHSGSKLKELLVIETDRFTLSIKGLPVNKNNDGKLHNIKQKRSYVSVESFVDQSYQVKIFDPKSPSGLRPYYYEGMPP CFFEQTNYEVVLEVNDGNNDYKLTHDNPHLDNAVTPTGSSGQIYTGVINFHNDIGFSRFVLEENGVKIFSFEIEVFPSKL DYIEDFYQMLQEVNQEIYNLAFDFLRRTYFSAQITKEETPSEAEFYTIISAIFKEFYNSLERVKNQPHHKIVPSNKVVRP EKAKKNNKDTLKWLQKRPNIMQKSSHSGIAINNNNYIPRKILDTKKEFSYDTYENRFLKWILLVIDKKLKRFSEKLNNEQ LEVKEEVQNEINKMRSKLRHFINYSFLQFAGRLTRLESSSLVMQMGQGYRDVYKYYLMMKKGLNLTSDFFDISIKDVALL YEYWCFLKLNSLLRNKYQLEYNDLISLDRSGIIVKLKKGRESQLTYRDPKTNEQFTVAYNRAFNNLPTVGQHPDNILSIK KSDSNVRYQYIFDAKYRLDTSIEYKQKFNQIGPPVDTINAMHRYRDAIVANNKHKEDYTRDIFGAFVLFPHNNEQKFAGL EGGKPSKFYDSISEISIGALPFLPSQAKLVKSFLDDLLLESSDTAFERSVIQQGTRNYFDKQQQISDVLIGPLRRAEQLE LCLNNNMYYTYLDQVKNQLGLLRYIALYQSKRKFQNQQEQGIFYYGKIQEYYIIPRKEIKEVKAASQPNELAVKFIVDEW KKLDKPIKPQGYGPQGPQFTNWYLFREAETYPELHLTWEEMRLLKELRRIENQAQFKFPTEMIKSDERFELIEFPELIIE RVDQERFKVITDYDEEIFKFQDLRGQARVILKNIIEIWKLGVSNKK
Specific function: Unknown
COG id: COG1700
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99986; Mature: 99855
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLHSGSKLKELLVIETDRFTLSIKGLPVNKNNDGKLHNIKQKRSYVSVESFVDQSYQV CCCCCCCCHHEEEEEEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE KIFDPKSPSGLRPYYYEGMPPCFFEQTNYEVVLEVNDGNNDYKLTHDNPHLDNAVTPTGS EEECCCCCCCCCCCEECCCCCCEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCC SGQIYTGVINFHNDIGFSRFVLEENGVKIFSFEIEVFPSKLDYIEDFYQMLQEVNQEIYN CCEEEEEEEEECCCCCCEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH LAFDFLRRTYFSAQITKEETPSEAEFYTIISAIFKEFYNSLERVKNQPHHKIVPSNKVVR HHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC PEKAKKNNKDTLKWLQKRPNIMQKSSHSGIAINNNNYIPRKILDTKKEFSYDTYENRFLK CHHHCCCCHHHHHHHHHCCCHHHCCCCCCEEECCCCCCCHHHHCCHHHCCCCHHHHHHHH WILLVIDKKLKRFSEKLNNEQLEVKEEVQNEINKMRSKLRHFINYSFLQFAGRLTRLESS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SLVMQMGQGYRDVYKYYLMMKKGLNLTSDFFDISIKDVALLYEYWCFLKLNSLLRNKYQL HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC EYNDLISLDRSGIIVKLKKGRESQLTYRDPKTNEQFTVAYNRAFNNLPTVGQHPDNILSI CHHHHHHCCCCCEEEEECCCCCCCCEECCCCCCCEEEEEEEHHCCCCCCCCCCCCCEEEE KKSDSNVRYQYIFDAKYRLDTSIEYKQKFNQIGPPVDTINAMHRYRDAIVANNKHKEDYT EECCCCEEEEEEEECEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHH RDIFGAFVLFPHNNEQKFAGLEGGKPSKFYDSISEISIGALPFLPSQAKLVKSFLDDLLL HHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ESSDTAFERSVIQQGTRNYFDKQQQISDVLIGPLRRAEQLELCLNNNMYYTYLDQVKNQL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH GLLRYIALYQSKRKFQNQQEQGIFYYGKIQEYYIIPRKEIKEVKAASQPNELAVKFIVDE HHHHHHHHHHHHHHHCCHHHCCEEEEEEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHH WKKLDKPIKPQGYGPQGPQFTNWYLFREAETYPELHLTWEEMRLLKELRRIENQAQFKFP HHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCC TEMIKSDERFELIEFPELIIERVDQERFKVITDYDEEIFKFQDLRGQARVILKNIIEIWK HHHHCCCCCEEHHHHHHHHHHHHCHHHHEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHH LGVSNKK CCCCCCC >Mature Secondary Structure ASLHSGSKLKELLVIETDRFTLSIKGLPVNKNNDGKLHNIKQKRSYVSVESFVDQSYQV CCCCCCCHHEEEEEEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE KIFDPKSPSGLRPYYYEGMPPCFFEQTNYEVVLEVNDGNNDYKLTHDNPHLDNAVTPTGS EEECCCCCCCCCCCEECCCCCCEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCC SGQIYTGVINFHNDIGFSRFVLEENGVKIFSFEIEVFPSKLDYIEDFYQMLQEVNQEIYN CCEEEEEEEEECCCCCCEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH LAFDFLRRTYFSAQITKEETPSEAEFYTIISAIFKEFYNSLERVKNQPHHKIVPSNKVVR HHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC PEKAKKNNKDTLKWLQKRPNIMQKSSHSGIAINNNNYIPRKILDTKKEFSYDTYENRFLK CHHHCCCCHHHHHHHHHCCCHHHCCCCCCEEECCCCCCCHHHHCCHHHCCCCHHHHHHHH WILLVIDKKLKRFSEKLNNEQLEVKEEVQNEINKMRSKLRHFINYSFLQFAGRLTRLESS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SLVMQMGQGYRDVYKYYLMMKKGLNLTSDFFDISIKDVALLYEYWCFLKLNSLLRNKYQL HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC EYNDLISLDRSGIIVKLKKGRESQLTYRDPKTNEQFTVAYNRAFNNLPTVGQHPDNILSI CHHHHHHCCCCCEEEEECCCCCCCCEECCCCCCCEEEEEEEHHCCCCCCCCCCCCCEEEE KKSDSNVRYQYIFDAKYRLDTSIEYKQKFNQIGPPVDTINAMHRYRDAIVANNKHKEDYT EECCCCEEEEEEEECEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHH RDIFGAFVLFPHNNEQKFAGLEGGKPSKFYDSISEISIGALPFLPSQAKLVKSFLDDLLL HHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ESSDTAFERSVIQQGTRNYFDKQQQISDVLIGPLRRAEQLELCLNNNMYYTYLDQVKNQL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH GLLRYIALYQSKRKFQNQQEQGIFYYGKIQEYYIIPRKEIKEVKAASQPNELAVKFIVDE HHHHHHHHHHHHHHHCCHHHCCEEEEEEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHH WKKLDKPIKPQGYGPQGPQFTNWYLFREAETYPELHLTWEEMRLLKELRRIENQAQFKFP HHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCC TEMIKSDERFELIEFPELIIERVDQERFKVITDYDEEIFKFQDLRGQARVILKNIIEIWK HHHHCCCCCEEHHHHHHHHHHHHCHHHHEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHH LGVSNKK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA