Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188585406

Identifier: 188585406

GI number: 188585406

Start: 807447

End: 808826

Strand: Direct

Name: 188585406

Synonym: Nther_0776

Alternate gene names: NA

Gene position: 807447-808826 (Clockwise)

Preceding gene: 188585405

Following gene: 188585407

Centisome position: 25.51

GC content: 32.75

Gene sequence:

>1380_bases
ATGGATAGCAACTCAAATAACAATTCAAACTTATCTACTAACTCAAATGTTAAACTGACCAAACTTCAGAAAAGGGAGCT
ATCGAAACTTCTGGATAAATACGAAAACCGAAAGGACTACGGGAAAGAAAGTAAAAATCCTCGTCGGGACTTTCTTCATA
TAACAGAAAAAAACTATCCTGACTATTATCATGTCAGTGACAGTAAGTTTCGACTGGATTATAACGCCGAAATGAAAGAA
CTGGAAAAGCACGGCTTTATTGATCTTATTTGGAAAAAATATCAGGAAGGTGAATACCTGGAAAAGATAGCCTTACAATA
TGAAAACTTAGAACAAGCTTACAGTGTTTTGAACAGAAAACCAAAAATAGAATACTACCGCGAACTAGAGAAGATTTTTT
ATAAATACTATAAAGAGGCTTCTAGTAATTTAAATAACTTTTACGAAGAAATGCTTAGTAAATTAAAACATCTACAGAAA
TTACCTGCCCAGGTGAAGTATGAAACACCACATGAAATTGAGGAATTGTTAATAGGATTAAACCAGTTAACCAAAAATAA
GGAACTTGAAATTCTGAAAAGAAACTTCTCTGTAGAACTTTATAGAGATTCTAAGAGATGGGATAAGTATGAAAGAAGAA
TTGTCTGGATAATCAAAAATTATTGGTCGAACAAAACTGATAATAAAGAATTAGATCAAGAACTAAATCAAGAACTAGCT
AAACCGCTTAAAGATCATATATATGATATATATATGATGGAAGATAATGAACTGCTAGCAGAGTTTGGATTGATTGAAAA
TCCACGTCATGTAAATATTAGCGGATACATGAAGTTTTCTACTCATCAGGGTGAGATCGACCTAGTAGCATTCTACCCCG
ATGTGGGACTCCCACCTCAAATGGTCAAAGATATGAAAATTAATACTCTTAAAGCGAATTGTATAATAACTATAGAAAAT
TTAACATCCTTTTATCATTATCTAAGTGTTGCCCCTGATAATCATCTGGTGATTTACCTGGGAGGTTATCACAATAGGAT
GAGAAGACACATTCTCAATAAGTTATGGGATTTCGTCAAATACCAAGGAATGGAAACCAAGTTTTATCATTGGGGTGATT
TAGATCTTGGGGGATTTAGGATTTATAATCATTTGAAAGAGAAAACTAACATTCCCTTTGCTCCTCTTATGATGGATGAA
AAAACCTACCTGTACCATATTGATAATGGTCATAAATTTAACAAAGATTATGAGAAAAAATTAACTGACTTATTAAAGGA
CGATGAATATAGTGAGTTCCATAACTTAATTAATCTCATGTTGAAACACAAGGTGCGAATTGAACAGGAAGCTGTTAGGG
ATATTGTGTTACCTGAGTAA

Upstream 100 bases:

>100_bases
TCCAGTTAATTGCTCCCCATGTTCATACTAACTTGATTGTTATGAAAGAAAAGTTCACAAGTTTTGTAGAACGAGTGTCC
AGGAAGGAGCTGCTTGAGTA

Downstream 100 bases:

>100_bases
TTTGGACAGAAAATCAAAAAAGAGTAAAAGTTAATTGTTTATTGCAACCATAATATTGTTCTAAAAAATCTGCTCTACCC
GGGCAGGTTTTTAGTATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MDSNSNNNSNLSTNSNVKLTKLQKRELSKLLDKYENRKDYGKESKNPRRDFLHITEKNYPDYYHVSDSKFRLDYNAEMKE
LEKHGFIDLIWKKYQEGEYLEKIALQYENLEQAYSVLNRKPKIEYYRELEKIFYKYYKEASSNLNNFYEEMLSKLKHLQK
LPAQVKYETPHEIEELLIGLNQLTKNKELEILKRNFSVELYRDSKRWDKYERRIVWIIKNYWSNKTDNKELDQELNQELA
KPLKDHIYDIYMMEDNELLAEFGLIENPRHVNISGYMKFSTHQGEIDLVAFYPDVGLPPQMVKDMKINTLKANCIITIEN
LTSFYHYLSVAPDNHLVIYLGGYHNRMRRHILNKLWDFVKYQGMETKFYHWGDLDLGGFRIYNHLKEKTNIPFAPLMMDE
KTYLYHIDNGHKFNKDYEKKLTDLLKDDEYSEFHNLINLMLKHKVRIEQEAVRDIVLPE

Sequences:

>Translated_459_residues
MDSNSNNNSNLSTNSNVKLTKLQKRELSKLLDKYENRKDYGKESKNPRRDFLHITEKNYPDYYHVSDSKFRLDYNAEMKE
LEKHGFIDLIWKKYQEGEYLEKIALQYENLEQAYSVLNRKPKIEYYRELEKIFYKYYKEASSNLNNFYEEMLSKLKHLQK
LPAQVKYETPHEIEELLIGLNQLTKNKELEILKRNFSVELYRDSKRWDKYERRIVWIIKNYWSNKTDNKELDQELNQELA
KPLKDHIYDIYMMEDNELLAEFGLIENPRHVNISGYMKFSTHQGEIDLVAFYPDVGLPPQMVKDMKINTLKANCIITIEN
LTSFYHYLSVAPDNHLVIYLGGYHNRMRRHILNKLWDFVKYQGMETKFYHWGDLDLGGFRIYNHLKEKTNIPFAPLMMDE
KTYLYHIDNGHKFNKDYEKKLTDLLKDDEYSEFHNLINLMLKHKVRIEQEAVRDIVLPE
>Mature_459_residues
MDSNSNNNSNLSTNSNVKLTKLQKRELSKLLDKYENRKDYGKESKNPRRDFLHITEKNYPDYYHVSDSKFRLDYNAEMKE
LEKHGFIDLIWKKYQEGEYLEKIALQYENLEQAYSVLNRKPKIEYYRELEKIFYKYYKEASSNLNNFYEEMLSKLKHLQK
LPAQVKYETPHEIEELLIGLNQLTKNKELEILKRNFSVELYRDSKRWDKYERRIVWIIKNYWSNKTDNKELDQELNQELA
KPLKDHIYDIYMMEDNELLAEFGLIENPRHVNISGYMKFSTHQGEIDLVAFYPDVGLPPQMVKDMKINTLKANCIITIEN
LTSFYHYLSVAPDNHLVIYLGGYHNRMRRHILNKLWDFVKYQGMETKFYHWGDLDLGGFRIYNHLKEKTNIPFAPLMMDE
KTYLYHIDNGHKFNKDYEKKLTDLLKDDEYSEFHNLINLMLKHKVRIEQEAVRDIVLPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55408; Mature: 55408

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNSNNNSNLSTNSNVKLTKLQKRELSKLLDKYENRKDYGKESKNPRRDFLHITEKNYP
CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHEEEECCCCC
DYYHVSDSKFRLDYNAEMKELEKHGFIDLIWKKYQEGEYLEKIALQYENLEQAYSVLNRK
CEEEECCCEEEEECCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PKIEYYRELEKIFYKYYKEASSNLNNFYEEMLSKLKHLQKLPAQVKYETPHEIEELLIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHH
NQLTKNKELEILKRNFSVELYRDSKRWDKYERRIVWIIKNYWSNKTDNKELDQELNQELA
HHHCCCCHHHHHHHCCEEEEEECCHHHHHHHHEEEEEEEHHCCCCCCCHHHHHHHHHHHH
KPLKDHIYDIYMMEDNELLAEFGLIENPRHVNISGYMKFSTHQGEIDLVAFYPDVGLPPQ
HHHHHHHEEEEEECCCHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCHH
MVKDMKINTLKANCIITIENLTSFYHYLSVAPDNHLVIYLGGYHNRMRRHILNKLWDFVK
HHHCCCCEEEEEEEEEEHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH
YQGMETKFYHWGDLDLGGFRIYNHLKEKTNIPFAPLMMDEKTYLYHIDNGHKFNKDYEKK
HCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCHHHHH
LTDLLKDDEYSEFHNLINLMLKHKVRIEQEAVRDIVLPE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDSNSNNNSNLSTNSNVKLTKLQKRELSKLLDKYENRKDYGKESKNPRRDFLHITEKNYP
CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHEEEECCCCC
DYYHVSDSKFRLDYNAEMKELEKHGFIDLIWKKYQEGEYLEKIALQYENLEQAYSVLNRK
CEEEECCCEEEEECCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PKIEYYRELEKIFYKYYKEASSNLNNFYEEMLSKLKHLQKLPAQVKYETPHEIEELLIGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHH
NQLTKNKELEILKRNFSVELYRDSKRWDKYERRIVWIIKNYWSNKTDNKELDQELNQELA
HHHCCCCHHHHHHHCCEEEEEECCHHHHHHHHEEEEEEEHHCCCCCCCHHHHHHHHHHHH
KPLKDHIYDIYMMEDNELLAEFGLIENPRHVNISGYMKFSTHQGEIDLVAFYPDVGLPPQ
HHHHHHHEEEEEECCCHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCHH
MVKDMKINTLKANCIITIENLTSFYHYLSVAPDNHLVIYLGGYHNRMRRHILNKLWDFVK
HHHCCCCEEEEEEEEEEHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH
YQGMETKFYHWGDLDLGGFRIYNHLKEKTNIPFAPLMMDEKTYLYHIDNGHKFNKDYEKK
HCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCHHHHH
LTDLLKDDEYSEFHNLINLMLKHKVRIEQEAVRDIVLPE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA