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The map label for this gene is ydfH [H]

Identifier: 188585328

GI number: 188585328

Start: 717118

End: 718542

Strand: Reverse

Name: ydfH [H]

Synonym: Nther_0693

Alternate gene names: 188585328

Gene position: 718542-717118 (Counterclockwise)

Preceding gene: 188585330

Following gene: 188585327

Centisome position: 22.7

GC content: 32.07

Gene sequence:

>1425_bases
ATGAAAGCTTTTTTCCTTGAATACTTCTATGAAGTTTATTTCATATACGGTTTATCTTTCATTATTATGGGTATTGCAAT
TACTCTTCAGGTTAAAGAGTATACTAATAAAACTTTTTCTAATAATCTATGGCTGCTGGCTGTTTTCGGTTACTTGCACG
GATTATCAGAATGGACTTATTTTTACCTCCCTTATAGGGAGAGTGATTTTACTTCTTCATCCTTGTTTATTCTAGAAGTA
ATTGATTTAAATTTAGTTGGAATTTCTTTTGGATTTTTATTATTTTTTGCATTACAGTTTTTATATGATATTCATAAACA
TGCTTTGGTAAAATATCTCTTCTACATTTCTATTGGTAGTTTAATTTCATGGTTAGTTTATTTTGTCTTCTATCAGTTAA
TATTTATAGGTGATAACCCAGATTACTGGTTTAATCTGGCTGAAATAATTAGCCGATATTTCTTTGCTTTACCTGCTGGA
TTAATTGCTTGCTACGCCGTATATCAACACAAAAAACAATTGCAAACTACTAACAAGTATACAGGGTACGTTTATAACTT
ACTAATGATAGCTTTCATGGGATATGGTATATTTGCAGGTTTTCTAGTTCCAAGTGCCGACTTTTTTCCAGCAGACGTAA
TAAATACAGAAACTTTTTTCAAGCTTACAAAATTGCCTGTTCCTTTATTTAGAACTTTTTTTAGTATATTAATTACTCTT
AGTATTCTTTTAATCTTAAGAAAGTTCCAATTAGAAAACATTTCGTTAATTGGACGAACTGTAAGCGAAAATGCTATTTT
ACAGGAACGGGAACGAATAAAAAAAGATCTGCACGATGATATCATGCAATCAATCTATTCTGTCGGACTAGCCCTTGAAA
GTTGTAAGTATGAATTGGACTCGGGAGATACAGAGGAAGTACGAGAAAGATTGGACAAGTCTGCGAAACAACTAGATAAT
ATTCTTTCAGATATGCGATTGTACATTCAAGATCTCAAATCTGCTGAACTGGCTTCATTAACCATTAGTGAGATAATTAG
CCGAATAGTCCAGAGATTTAAACGACATTTAAACATTGAATTTAAAAATGACTTAAAATCTTTTATAGATGTTAAACCGG
AAATTAAAGCTGCCATACACAATACCTTAGGAGAACTACTAATAAATGCAGTAAAGCATTCACAAGCCGATAAAATCACT
ATTACTATAAAAGCTGGCCAAGCTAATAACATTTTAATCACATTAGAAGATAATGGCGTGGGAGTAGATTTGAAAGAGTT
GCAGAGAAAACAAAGCCAGAGAGAAAAACTCGGTCTGGTTCATGTTAAAGAACGAATTCATACCCTGGGCGGTGAATTCA
ATTTCCAAACCGAAAAAAGTAAAGGAACTAAGTTTTATTTAGAATTGCCAAAGAAGGGAGGGTAA

Upstream 100 bases:

>100_bases
GAACTTTCTAATCAAAATAGTTACTTTTAAAGATACATTATAGTATAATTTATCATGAGAATTTAAAGGTGAAATTATAC
TTATTAGAAAGGGGCTCTCT

Downstream 100 bases:

>100_bases
ACCAAATGTACCAAGTGTTAATTGTGGATGACCATGAAATGATCCGCTTGGGCCTGAAAGAACATTTATTAAAAGGTGAG
AAAATTTCCCATGTAAGTGA

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MKAFFLEYFYEVYFIYGLSFIIMGIAITLQVKEYTNKTFSNNLWLLAVFGYLHGLSEWTYFYLPYRESDFTSSSLFILEV
IDLNLVGISFGFLLFFALQFLYDIHKHALVKYLFYISIGSLISWLVYFVFYQLIFIGDNPDYWFNLAEIISRYFFALPAG
LIACYAVYQHKKQLQTTNKYTGYVYNLLMIAFMGYGIFAGFLVPSADFFPADVINTETFFKLTKLPVPLFRTFFSILITL
SILLILRKFQLENISLIGRTVSENAILQERERIKKDLHDDIMQSIYSVGLALESCKYELDSGDTEEVRERLDKSAKQLDN
ILSDMRLYIQDLKSAELASLTISEIISRIVQRFKRHLNIEFKNDLKSFIDVKPEIKAAIHNTLGELLINAVKHSQADKIT
ITIKAGQANNILITLEDNGVGVDLKELQRKQSQREKLGLVHVKERIHTLGGEFNFQTEKSKGTKFYLELPKKGG

Sequences:

>Translated_474_residues
MKAFFLEYFYEVYFIYGLSFIIMGIAITLQVKEYTNKTFSNNLWLLAVFGYLHGLSEWTYFYLPYRESDFTSSSLFILEV
IDLNLVGISFGFLLFFALQFLYDIHKHALVKYLFYISIGSLISWLVYFVFYQLIFIGDNPDYWFNLAEIISRYFFALPAG
LIACYAVYQHKKQLQTTNKYTGYVYNLLMIAFMGYGIFAGFLVPSADFFPADVINTETFFKLTKLPVPLFRTFFSILITL
SILLILRKFQLENISLIGRTVSENAILQERERIKKDLHDDIMQSIYSVGLALESCKYELDSGDTEEVRERLDKSAKQLDN
ILSDMRLYIQDLKSAELASLTISEIISRIVQRFKRHLNIEFKNDLKSFIDVKPEIKAAIHNTLGELLINAVKHSQADKIT
ITIKAGQANNILITLEDNGVGVDLKELQRKQSQREKLGLVHVKERIHTLGGEFNFQTEKSKGTKFYLELPKKGG
>Mature_474_residues
MKAFFLEYFYEVYFIYGLSFIIMGIAITLQVKEYTNKTFSNNLWLLAVFGYLHGLSEWTYFYLPYRESDFTSSSLFILEV
IDLNLVGISFGFLLFFALQFLYDIHKHALVKYLFYISIGSLISWLVYFVFYQLIFIGDNPDYWFNLAEIISRYFFALPAG
LIACYAVYQHKKQLQTTNKYTGYVYNLLMIAFMGYGIFAGFLVPSADFFPADVINTETFFKLTKLPVPLFRTFFSILITL
SILLILRKFQLENISLIGRTVSENAILQERERIKKDLHDDIMQSIYSVGLALESCKYELDSGDTEEVRERLDKSAKQLDN
ILSDMRLYIQDLKSAELASLTISEIISRIVQRFKRHLNIEFKNDLKSFIDVKPEIKAAIHNTLGELLINAVKHSQADKIT
ITIKAGQANNILITLEDNGVGVDLKELQRKQSQREKLGLVHVKERIHTLGGEFNFQTEKSKGTKFYLELPKKGG

Specific function: Member of the two-component regulatory system ydfH/ydfI. May activate ydfI by phosphorylation [H]

COG id: COG4585

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR000014
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 54831; Mature: 54831

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFFLEYFYEVYFIYGLSFIIMGIAITLQVKEYTNKTFSNNLWLLAVFGYLHGLSEWTY
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCHHCCCCHHHHHHHHHHHHCCCEE
FYLPYRESDFTSSSLFILEVIDLNLVGISFGFLLFFALQFLYDIHKHALVKYLFYISIGS
EEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISWLVYFVFYQLIFIGDNPDYWFNLAEIISRYFFALPAGLIACYAVYQHKKQLQTTNKY
HHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TGYVYNLLMIAFMGYGIFAGFLVPSADFFPADVINTETFFKLTKLPVPLFRTFFSILITL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHH
SILLILRKFQLENISLIGRTVSENAILQERERIKKDLHDDIMQSIYSVGLALESCKYELD
HHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGDTEEVRERLDKSAKQLDNILSDMRLYIQDLKSAELASLTISEIISRIVQRFKRHLNIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
FKNDLKSFIDVKPEIKAAIHNTLGELLINAVKHSQADKITITIKAGQANNILITLEDNGV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCC
GVDLKELQRKQSQREKLGLVHVKERIHTLGGEFNFQTEKSKGTKFYLELPKKGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKAFFLEYFYEVYFIYGLSFIIMGIAITLQVKEYTNKTFSNNLWLLAVFGYLHGLSEWTY
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCHHCCCCHHHHHHHHHHHHCCCEE
FYLPYRESDFTSSSLFILEVIDLNLVGISFGFLLFFALQFLYDIHKHALVKYLFYISIGS
EEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISWLVYFVFYQLIFIGDNPDYWFNLAEIISRYFFALPAGLIACYAVYQHKKQLQTTNKY
HHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TGYVYNLLMIAFMGYGIFAGFLVPSADFFPADVINTETFFKLTKLPVPLFRTFFSILITL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHH
SILLILRKFQLENISLIGRTVSENAILQERERIKKDLHDDIMQSIYSVGLALESCKYELD
HHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGDTEEVRERLDKSAKQLDNILSDMRLYIQDLKSAELASLTISEIISRIVQRFKRHLNIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
FKNDLKSFIDVKPEIKAAIHNTLGELLINAVKHSQADKITITIKAGQANNILITLEDNGV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCC
GVDLKELQRKQSQREKLGLVHVKERIHTLGGEFNFQTEKSKGTKFYLELPKKGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]