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The map label for this gene is 188585307

Identifier: 188585307

GI number: 188585307

Start: 695120

End: 696526

Strand: Direct

Name: 188585307

Synonym: Nther_0671

Alternate gene names: NA

Gene position: 695120-696526 (Clockwise)

Preceding gene: 188585303

Following gene: 188585310

Centisome position: 21.96

GC content: 36.18

Gene sequence:

>1407_bases
ATGAAGATCACCTTAATAGAACCCAAATCTCCTGGGGTACATGTTTTCAATAAGGTTAAGCTTCCCAGGCTGGGACTACC
TATAATGGCGACAATTTTAAAACAAAAAGGTTACGATGTTGAAGTTCAAGCTGAAGAAATCAGATCACTAAATTTTGACA
GGATTTACAATTCTGACTTAGTGGGTCTATCAACAATTACTTCCACAGCACCTAGAGCCTACCATTTGGCAGACAAAATC
AAGAACCAGGTAGATATACCAATTGTGATCGGAGGTTCTCATGTTACTTTTTATCCAGAGGAGGCTCTTTCTCATGCAGA
TTTTTGCGTTATGGGCGAAGGAGAAAAGTCTTTTTTAGAACTGGTAGAATTCATTGATACTCAGAAGGATTCCGGAAAAA
AACCTGAAAACATTCCAGGTTTGGCCTATTTTAATGAAAACAAAGAGTTAATTAAAAACTCATTACCAGATCCGGTAACT
CATAATGATCTGCCATTTCCCGACTTGAGTTTGATTGCTGGTAGTGAGAAAATGAATATCCTGCCTATGGAAACTTCCAG
AGGATGTCCCTTTGGTTGCAAGTTTTGTTCAGTTATTAAAATGTTTGGAAAGAAATACAGGTTTAAACACATTGATAAGG
TTGCCGATGAATTAGCACGTCTTTCTCCTGCCAAAATATTTTTTTACGATGATAATTTTGCGGCAGACCGGGAGCGGACC
TATCAATTGATGAAAAAAATTATTTCGAGAAGAGATATTAACATTCAATGGGGTGCACAAGTAAGAGCAGACATCTATAA
AGACCCAGAATTACTAGATATCATGAAAGAAGCAGGGGGAAGGATGTTACACATTGGTTTTGAAAGTGTTAATCAATCAA
CCTTGGAAGAATACAATAAGAGCCTAAGTATCGATGAAACAAAGCAGGCAATCAAAACAATTAAAGATAAAGGGTTCCAC
ATCCATGGAATGTTCGTTATTGGCAGTGATCATGATGATGTCCGAACAGCTCACGAAACCGTCAATTTTGCCTTAAAACA
CAAAATTGATACTATTCAACTACTTATTTTAGTTCCCATTCCTGGTTCGGAACAGTTCCATGAATTAGCCTCTCAAAATC
GATTGTTGCCATCTTCTTGGGAGTATTATGATGGCCATCATGTAGTTCATAGACCTGAAAATATTTCTCCTTATGAGCTT
CAATATCAGGTAATGAAAGAGATGACCAGATTTTATTCTTTCAAAAAATGCTTAGAATTGGCTGCGAAATTTAAGTTTAT
CAATCTATATTTTAGATTTTACGGATTTCGTACTCTCAGACAATGGTTTAAGGACCGCAAAAATATTTCTTATCTTGAAT
TTCTTAAAAAGAAATACTCTCCTGATGTAACCATGAACACACAATAA

Upstream 100 bases:

>100_bases
TTAGACAAAATAAATTAAAGGATTAAGTGTTTATATAACAGGGGTTACAAGAATTAGAATTAATAATATTTTTAATCAAT
TTTAAGTGAGGTGATGTTAT

Downstream 100 bases:

>100_bases
ATTAAATAATAATGTAAAAAACACAAACTCACCCGTTTTTGGAGCGGGTGAGTTTGTGTGTGGAATAAATGAGGGAAAAT
GGTTAGGGAGAATATTAATT

Product: Radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MKITLIEPKSPGVHVFNKVKLPRLGLPIMATILKQKGYDVEVQAEEIRSLNFDRIYNSDLVGLSTITSTAPRAYHLADKI
KNQVDIPIVIGGSHVTFYPEEALSHADFCVMGEGEKSFLELVEFIDTQKDSGKKPENIPGLAYFNENKELIKNSLPDPVT
HNDLPFPDLSLIAGSEKMNILPMETSRGCPFGCKFCSVIKMFGKKYRFKHIDKVADELARLSPAKIFFYDDNFAADRERT
YQLMKKIISRRDINIQWGAQVRADIYKDPELLDIMKEAGGRMLHIGFESVNQSTLEEYNKSLSIDETKQAIKTIKDKGFH
IHGMFVIGSDHDDVRTAHETVNFALKHKIDTIQLLILVPIPGSEQFHELASQNRLLPSSWEYYDGHHVVHRPENISPYEL
QYQVMKEMTRFYSFKKCLELAAKFKFINLYFRFYGFRTLRQWFKDRKNISYLEFLKKKYSPDVTMNTQ

Sequences:

>Translated_468_residues
MKITLIEPKSPGVHVFNKVKLPRLGLPIMATILKQKGYDVEVQAEEIRSLNFDRIYNSDLVGLSTITSTAPRAYHLADKI
KNQVDIPIVIGGSHVTFYPEEALSHADFCVMGEGEKSFLELVEFIDTQKDSGKKPENIPGLAYFNENKELIKNSLPDPVT
HNDLPFPDLSLIAGSEKMNILPMETSRGCPFGCKFCSVIKMFGKKYRFKHIDKVADELARLSPAKIFFYDDNFAADRERT
YQLMKKIISRRDINIQWGAQVRADIYKDPELLDIMKEAGGRMLHIGFESVNQSTLEEYNKSLSIDETKQAIKTIKDKGFH
IHGMFVIGSDHDDVRTAHETVNFALKHKIDTIQLLILVPIPGSEQFHELASQNRLLPSSWEYYDGHHVVHRPENISPYEL
QYQVMKEMTRFYSFKKCLELAAKFKFINLYFRFYGFRTLRQWFKDRKNISYLEFLKKKYSPDVTMNTQ
>Mature_468_residues
MKITLIEPKSPGVHVFNKVKLPRLGLPIMATILKQKGYDVEVQAEEIRSLNFDRIYNSDLVGLSTITSTAPRAYHLADKI
KNQVDIPIVIGGSHVTFYPEEALSHADFCVMGEGEKSFLELVEFIDTQKDSGKKPENIPGLAYFNENKELIKNSLPDPVT
HNDLPFPDLSLIAGSEKMNILPMETSRGCPFGCKFCSVIKMFGKKYRFKHIDKVADELARLSPAKIFFYDDNFAADRERT
YQLMKKIISRRDINIQWGAQVRADIYKDPELLDIMKEAGGRMLHIGFESVNQSTLEEYNKSLSIDETKQAIKTIKDKGFH
IHGMFVIGSDHDDVRTAHETVNFALKHKIDTIQLLILVPIPGSEQFHELASQNRLLPSSWEYYDGHHVVHRPENISPYEL
QYQVMKEMTRFYSFKKCLELAAKFKFINLYFRFYGFRTLRQWFKDRKNISYLEFLKKKYSPDVTMNTQ

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 54058; Mature: 54058

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITLIEPKSPGVHVFNKVKLPRLGLPIMATILKQKGYDVEVQAEEIRSLNFDRIYNSDL
CEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHCCCCC
VGLSTITSTAPRAYHLADKIKNQVDIPIVIGGSHVTFYPEEALSHADFCVMGEGEKSFLE
CCHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCEEEECCHHHCCCCCEEEECCCHHHHHH
LVEFIDTQKDSGKKPENIPGLAYFNENKELIKNSLPDPVTHNDLPFPDLSLIAGSEKMNI
HHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCHHEEECCCCCEE
LPMETSRGCPFGCKFCSVIKMFGKKYRFKHIDKVADELARLSPAKIFFYDDNFAADRERT
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
YQLMKKIISRRDINIQWGAQVRADIYKDPELLDIMKEAGGRMLHIGFESVNQSTLEEYNK
HHHHHHHHHHCCCCEEECCCEEHHHCCCHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHC
SLSIDETKQAIKTIKDKGFHIHGMFVIGSDHDDVRTAHETVNFALKHKIDTIQLLILVPI
CCCCHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEC
PGSEQFHELASQNRLLPSSWEYYDGHHVVHRPENISPYELQYQVMKEMTRFYSFKKCLEL
CCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAKFKFINLYFRFYGFRTLRQWFKDRKNISYLEFLKKKYSPDVTMNTQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MKITLIEPKSPGVHVFNKVKLPRLGLPIMATILKQKGYDVEVQAEEIRSLNFDRIYNSDL
CEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHCCCCC
VGLSTITSTAPRAYHLADKIKNQVDIPIVIGGSHVTFYPEEALSHADFCVMGEGEKSFLE
CCHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCEEEECCHHHCCCCCEEEECCCHHHHHH
LVEFIDTQKDSGKKPENIPGLAYFNENKELIKNSLPDPVTHNDLPFPDLSLIAGSEKMNI
HHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCHHEEECCCCCEE
LPMETSRGCPFGCKFCSVIKMFGKKYRFKHIDKVADELARLSPAKIFFYDDNFAADRERT
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
YQLMKKIISRRDINIQWGAQVRADIYKDPELLDIMKEAGGRMLHIGFESVNQSTLEEYNK
HHHHHHHHHHCCCCEEECCCEEHHHCCCHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHC
SLSIDETKQAIKTIKDKGFHIHGMFVIGSDHDDVRTAHETVNFALKHKIDTIQLLILVPI
CCCCHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEC
PGSEQFHELASQNRLLPSSWEYYDGHHVVHRPENISPYELQYQVMKEMTRFYSFKKCLEL
CCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAKFKFINLYFRFYGFRTLRQWFKDRKNISYLEFLKKKYSPDVTMNTQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]