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The map label for this gene is 188585310

Identifier: 188585310

GI number: 188585310

Start: 698992

End: 700053

Strand: Direct

Name: 188585310

Synonym: Nther_0674

Alternate gene names: NA

Gene position: 698992-700053 (Clockwise)

Preceding gene: 188585307

Following gene: 188585312

Centisome position: 22.08

GC content: 36.35

Gene sequence:

>1062_bases
ATGACTAAAGTTGTATGCCCTAGATGCAATAACAACTGCTCTGACAAGTTTTATAAGTTTGGTTTTGATAATCATGGTCA
TCAAAAGTATCAATGTCAAGAATGTTTTAGTCAGTTTGCACCTAAGACACTTTCTAAAGGCGGGGATAAAAGAGGCCCTA
ATATGCCTCGCAAATATCCCTCTTGCCCTAAATGCGGGAAAGCTACATTTTTACATCACGACTATGAATTTTATTCTAAT
TTGAGGTGTTGTGACAAAAGCTGTAATCATTCTTTCTATGTCCCTAAACCTCAAAGTATTCCTGAACCTTCGCAACTTGA
TATTAACGGCAAAGTAGACTTCTCTAACATGAGACATCCTCTTCATACTATTATTCGAGCTCTTTACCTGTACTTCATTA
ATGGCAGCTCTACTAGAGGTGTCTCTCAATTCCTTCTTGATTGTGAAGGAATTAAAGTGTCTCATGTTACTATTGCTGAC
TGGACTAAAAAGTTTGCACCTCTTTTTCTTTATATCTCTAGATATCTTAAACCTATTGATCTAGACTCTTCTGATGAGTG
GCATGTTGACGAAACTGTAATTAAAATTAAAGGCCAAAGATTCTACGCCTGGACTGTTATTGATGCTGAAACTAGATTTG
TACTTGCATTTCATCTATCTCCTTACAGAGATAGCCAGGCTGCTTTTAAAGTGCTGAACTATGCTAAGAAACATTTTGGA
CGACCTCATAGTATCGTCACAGATAGATATTGGGCTTACAATGCTCCAATTAAAGTTCTGTTTCCAAACTCTAATCACAT
CAGAGTCAAGTCTTTTCAAGATGATATCTCTAATAACTTAATTGAATCTTTTTTTCAGATTTTCAAAAGCTGGGTTAAGC
AACGCAGAGGATTTGCTTCTTTCCAGTCAGCCAACAAGTTGATTGCGGTATTTGTGTTTGCTTTTAACTTTGTTAGGACA
AGCAATGTTTTGAATCAGTCTACTCCTGCTCAAGTTGCTGGGATTAATTACTCTAATCGTAATAGGACTTTTTGGCTTTT
ACATAGTAATAATGCCGCTTGA

Upstream 100 bases:

>100_bases
AGTTCTGTTAAGTTATATGATATTTGAATCAGTCTCCGTCCCGGAGTTAAGATAGTTTTAGACAGAAATCAAAACCCTCC
GGGAGAAAGGAGACTGATTC

Downstream 100 bases:

>100_bases
CTGCCAAATCTTTTGAAATCTTGCGAGCAAGTGAGCTTATTTTTCATAACAACTTAACAGACTCTTTATTTTTTAAATCT
TTGACCATATCCAGCTTTTC

Product: Integrase catalytic region

Products: NA

Alternate protein names: Integrase Catalytic Region; IS6 Family Transposase; Integrase Core Domain Protein; Integrase Catalytic Subunit; ISCpe7 Transposase; Transposase-Related Protein; Integrase; ISYps1 Transposase; IS Element Transposase; Insertion Element; LOW QUALITY PROTEIN Integrase; Transposase Protein

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTKVVCPRCNNNCSDKFYKFGFDNHGHQKYQCQECFSQFAPKTLSKGGDKRGPNMPRKYPSCPKCGKATFLHHDYEFYSN
LRCCDKSCNHSFYVPKPQSIPEPSQLDINGKVDFSNMRHPLHTIIRALYLYFINGSSTRGVSQFLLDCEGIKVSHVTIAD
WTKKFAPLFLYISRYLKPIDLDSSDEWHVDETVIKIKGQRFYAWTVIDAETRFVLAFHLSPYRDSQAAFKVLNYAKKHFG
RPHSIVTDRYWAYNAPIKVLFPNSNHIRVKSFQDDISNNLIESFFQIFKSWVKQRRGFASFQSANKLIAVFVFAFNFVRT
SNVLNQSTPAQVAGINYSNRNRTFWLLHSNNAA

Sequences:

>Translated_353_residues
MTKVVCPRCNNNCSDKFYKFGFDNHGHQKYQCQECFSQFAPKTLSKGGDKRGPNMPRKYPSCPKCGKATFLHHDYEFYSN
LRCCDKSCNHSFYVPKPQSIPEPSQLDINGKVDFSNMRHPLHTIIRALYLYFINGSSTRGVSQFLLDCEGIKVSHVTIAD
WTKKFAPLFLYISRYLKPIDLDSSDEWHVDETVIKIKGQRFYAWTVIDAETRFVLAFHLSPYRDSQAAFKVLNYAKKHFG
RPHSIVTDRYWAYNAPIKVLFPNSNHIRVKSFQDDISNNLIESFFQIFKSWVKQRRGFASFQSANKLIAVFVFAFNFVRT
SNVLNQSTPAQVAGINYSNRNRTFWLLHSNNAA
>Mature_352_residues
TKVVCPRCNNNCSDKFYKFGFDNHGHQKYQCQECFSQFAPKTLSKGGDKRGPNMPRKYPSCPKCGKATFLHHDYEFYSNL
RCCDKSCNHSFYVPKPQSIPEPSQLDINGKVDFSNMRHPLHTIIRALYLYFINGSSTRGVSQFLLDCEGIKVSHVTIADW
TKKFAPLFLYISRYLKPIDLDSSDEWHVDETVIKIKGQRFYAWTVIDAETRFVLAFHLSPYRDSQAAFKVLNYAKKHFGR
PHSIVTDRYWAYNAPIKVLFPNSNHIRVKSFQDDISNNLIESFFQIFKSWVKQRRGFASFQSANKLIAVFVFAFNFVRTS
NVLNQSTPAQVAGINYSNRNRTFWLLHSNNAA

Specific function: Unknown

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40906; Mature: 40775

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVVCPRCNNNCSDKFYKFGFDNHGHQKYQCQECFSQFAPKTLSKGGDKRGPNMPRKYP
CCCEECCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
SCPKCGKATFLHHDYEFYSNLRCCDKSCNHSFYVPKPQSIPEPSQLDINGKVDFSNMRHP
CCCCCCCEEEEECCHHHHCCHHHHHHCCCCCEECCCCCCCCCCCEEECCCEEEHHHCCCH
LHTIIRALYLYFINGSSTRGVSQFLLDCEGIKVSHVTIADWTKKFAPLFLYISRYLKPID
HHHHHHHHHHEEECCCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC
LDSSDEWHVDETVIKIKGQRFYAWTVIDAETRFVLAFHLSPYRDSQAAFKVLNYAKKHFG
CCCCCCCCCCCEEEEEECCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC
RPHSIVTDRYWAYNAPIKVLFPNSNHIRVKSFQDDISNNLIESFFQIFKSWVKQRRGFAS
CCCCEECCCEEEECCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FQSANKLIAVFVFAFNFVRTSNVLNQSTPAQVAGINYSNRNRTFWLLHSNNAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEECCCCCEEEEEECCCCC
>Mature Secondary Structure 
TKVVCPRCNNNCSDKFYKFGFDNHGHQKYQCQECFSQFAPKTLSKGGDKRGPNMPRKYP
CCEECCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
SCPKCGKATFLHHDYEFYSNLRCCDKSCNHSFYVPKPQSIPEPSQLDINGKVDFSNMRHP
CCCCCCCEEEEECCHHHHCCHHHHHHCCCCCEECCCCCCCCCCCEEECCCEEEHHHCCCH
LHTIIRALYLYFINGSSTRGVSQFLLDCEGIKVSHVTIADWTKKFAPLFLYISRYLKPID
HHHHHHHHHHEEECCCCCCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC
LDSSDEWHVDETVIKIKGQRFYAWTVIDAETRFVLAFHLSPYRDSQAAFKVLNYAKKHFG
CCCCCCCCCCCEEEEEECCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC
RPHSIVTDRYWAYNAPIKVLFPNSNHIRVKSFQDDISNNLIESFFQIFKSWVKQRRGFAS
CCCCEECCCEEEECCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FQSANKLIAVFVFAFNFVRTSNVLNQSTPAQVAGINYSNRNRTFWLLHSNNAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA