| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585285
Identifier: 188585285
GI number: 188585285
Start: 670607
End: 671731
Strand: Direct
Name: 188585285
Synonym: Nther_0647
Alternate gene names: NA
Gene position: 670607-671731 (Clockwise)
Preceding gene: 188585284
Following gene: 188585289
Centisome position: 21.18
GC content: 33.96
Gene sequence:
>1125_bases ATGATATGGCAGAGATTAATTTGGAAAAAATTAATTCATGGAACTGTTCCTAGAATTAATCCTGGAAAATGTATTAATAA AAAAGTCAATATCAAAAATTGTAATAAATGTGCTAGCATTTGCCCTAGAGAGGCTATTTCCATTCAAGGTGCATTCCCTA GTATACTTCGAAAGAATTGTATTGGATGTCATATCTGTGTACGACAGTGTCCTAACGGGGCAATATATCAGACAGATTTT GATTATTATAGGAAATACAGGGAGATTTTACATTTAAAAGAACCCATCTTAGGTTGTTACTATCACACGAGTCAATGTAA TATAGTGTTTCCGTGTTTGTATTCGATAAACATGGATTTTCTCCATGCCATATTTCTAAACAGTGCAGTTCAAGGCTCGA ATTTATATTTTTATCTGGAAAAGTGTCCTCAATGCGAAATTTTTTCAAATTATCCTGTGTTTTTGGAAACCGTCAAAAAA GCTTTTTATTTAGCTGAACAATTAGGGCAAGAACCAAGAGTTGCAGCAATTAATCAAAAAAACACTCAACAATTTCCAAA TTCAAAATCGGAAACAAACTTTATGTCAAGGAGGGAACTATTCAATTTAATTCGAGATGAGACTTTAAACAATATGAGAG GTGTTACCAGAGAACTCTTATTTGATGATATCAATGACTTAACCACATGTCGTAGTTTATTACTTAAGGAGTGGTTAAGA AAATATCAAAGCCAATTCCTTAAAGGAAAACCAAGACCGGGTTTTGGCAGTTTAAAGATAAGTCCTGATTGCTATGGCTG TGGCTTGTGCGCAAAAAGCTGTGATTTTGGTGCACTGACTATTAATACCTGGGGTTCAGGAGAATCAAAACAAATAGTAA TACAACACAGTCCTTGGAAGTGTTTTGATTGTGGTATTTGCAAACTAGCTTGCCCTGTTGATGCCATAAAGAAAACTAAA TTCACTGGTAAAATTAAGCAAATGCTTACAAAGCAGACTTTAAAAAGCCTGCTTGCCAGGAGATGCAGTCAATGTCATCG AATAACTATGAAAGACCAAGAACTGTCTATAACAGACAAATTTGTTTGTAATCCCTGTTTGAAAAAATCCGAAATAGAAT TTTAA
Upstream 100 bases:
>100_bases TTTGGGCCAATGGATATATAGTTGTTCCCCCGGATAGCCAGGCGATAAGGGCCGGTGATAAAGTTAATTTTATCCCAATA GATAAGTGAAGTGATGTGAA
Downstream 100 bases:
>100_bases TAAAAAATTTTGCTAAAGAATTTTAATAAAGAAGTAAGATAAAGATTAAATTCTATCTAGCTTCACTCGGTACTGATTAT ATTATTTCTCATTGCATATC
Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MIWQRLIWKKLIHGTVPRINPGKCINKKVNIKNCNKCASICPREAISIQGAFPSILRKNCIGCHICVRQCPNGAIYQTDF DYYRKYREILHLKEPILGCYYHTSQCNIVFPCLYSINMDFLHAIFLNSAVQGSNLYFYLEKCPQCEIFSNYPVFLETVKK AFYLAEQLGQEPRVAAINQKNTQQFPNSKSETNFMSRRELFNLIRDETLNNMRGVTRELLFDDINDLTTCRSLLLKEWLR KYQSQFLKGKPRPGFGSLKISPDCYGCGLCAKSCDFGALTINTWGSGESKQIVIQHSPWKCFDCGICKLACPVDAIKKTK FTGKIKQMLTKQTLKSLLARRCSQCHRITMKDQELSITDKFVCNPCLKKSEIEF
Sequences:
>Translated_374_residues MIWQRLIWKKLIHGTVPRINPGKCINKKVNIKNCNKCASICPREAISIQGAFPSILRKNCIGCHICVRQCPNGAIYQTDF DYYRKYREILHLKEPILGCYYHTSQCNIVFPCLYSINMDFLHAIFLNSAVQGSNLYFYLEKCPQCEIFSNYPVFLETVKK AFYLAEQLGQEPRVAAINQKNTQQFPNSKSETNFMSRRELFNLIRDETLNNMRGVTRELLFDDINDLTTCRSLLLKEWLR KYQSQFLKGKPRPGFGSLKISPDCYGCGLCAKSCDFGALTINTWGSGESKQIVIQHSPWKCFDCGICKLACPVDAIKKTK FTGKIKQMLTKQTLKSLLARRCSQCHRITMKDQELSITDKFVCNPCLKKSEIEF >Mature_374_residues MIWQRLIWKKLIHGTVPRINPGKCINKKVNIKNCNKCASICPREAISIQGAFPSILRKNCIGCHICVRQCPNGAIYQTDF DYYRKYREILHLKEPILGCYYHTSQCNIVFPCLYSINMDFLHAIFLNSAVQGSNLYFYLEKCPQCEIFSNYPVFLETVKK AFYLAEQLGQEPRVAAINQKNTQQFPNSKSETNFMSRRELFNLIRDETLNNMRGVTRELLFDDINDLTTCRSLLLKEWLR KYQSQFLKGKPRPGFGSLKISPDCYGCGLCAKSCDFGALTINTWGSGESKQIVIQHSPWKCFDCGICKLACPVDAIKKTK FTGKIKQMLTKQTLKSLLARRCSQCHRITMKDQELSITDKFVCNPCLKKSEIEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43056; Mature: 43056
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWQRLIWKKLIHGTVPRINPGKCINKKVNIKNCNKCASICPREAISIQGAFPSILRKNC CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHEEECCCCHHHHHHCC IGCHICVRQCPNGAIYQTDFDYYRKYREILHLKEPILGCYYHTSQCNIVFPCLYSINMDF CHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEHHHHHCCHHH LHAIFLNSAVQGSNLYFYLEKCPQCEIFSNYPVFLETVKKAFYLAEQLGQEPRVAAINQK HHHHHHHHCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCC NTQQFPNSKSETNFMSRRELFNLIRDETLNNMRGVTRELLFDDINDLTTCRSLLLKEWLR CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYQSQFLKGKPRPGFGSLKISPDCYGCGLCAKSCDFGALTINTWGSGESKQIVIQHSPWK HHHHHHHCCCCCCCCCCEEECCCCCCCCHHHCCCCCCEEEEECCCCCCCCEEEEECCCCC CFDCGICKLACPVDAIKKTKFTGKIKQMLTKQTLKSLLARRCSQCHRITMKDQELSITDK EECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH FVCNPCLKKSEIEF HHHCHHCCCCCCCC >Mature Secondary Structure MIWQRLIWKKLIHGTVPRINPGKCINKKVNIKNCNKCASICPREAISIQGAFPSILRKNC CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHEEECCCCHHHHHHCC IGCHICVRQCPNGAIYQTDFDYYRKYREILHLKEPILGCYYHTSQCNIVFPCLYSINMDF CHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEHHHHHCCHHH LHAIFLNSAVQGSNLYFYLEKCPQCEIFSNYPVFLETVKKAFYLAEQLGQEPRVAAINQK HHHHHHHHCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCC NTQQFPNSKSETNFMSRRELFNLIRDETLNNMRGVTRELLFDDINDLTTCRSLLLKEWLR CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYQSQFLKGKPRPGFGSLKISPDCYGCGLCAKSCDFGALTINTWGSGESKQIVIQHSPWK HHHHHHHCCCCCCCCCCEEECCCCCCCCHHHCCCCCCEEEEECCCCCCCCEEEEECCCCC CFDCGICKLACPVDAIKKTKFTGKIKQMLTKQTLKSLLARRCSQCHRITMKDQELSITDK EECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH FVCNPCLKKSEIEF HHHCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA