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The map label for this gene is ygeX [H]

Identifier: 188585277

GI number: 188585277

Start: 661714

End: 662946

Strand: Direct

Name: ygeX [H]

Synonym: Nther_0639

Alternate gene names: 188585277

Gene position: 661714-662946 (Clockwise)

Preceding gene: 188585275

Following gene: 188585278

Centisome position: 20.9

GC content: 38.85

Gene sequence:

>1233_bases
ATGATTTTAACTTGTAGGAATCAGTACCGATCCGAAAAACTCCTTGTCAATCAAAACCAATTAGATTACATAGAACAAGT
AGTTAAATTTTATCAAAAAATCACTAATTATCAACCTACACCTCAAATCTCTTTACATGACATGGCGAATTCCATAGGCG
TAAAAAATATCTTTGTTAAAGATGAATCTTCTAGATTAGGTTTGGATTCTTTTAAGGTCCTTGGCAGTTTGTATGCCGTT
GCAAATATAATAGCCGAGTACCTGGGAGAAGACCTGTCTCAACTTGATGAACAGGAGCTACAAAGTCGTAAAGTAAAAGA
ACGGGTGGGTCACTTAACTTTTGTGACAGCCACTGATGGGAATCATGGTAAAGGATTGGCTTATGCCGCCAATTTTTTTG
GGCATAATGCAGTTGTGTACTTACCTAAGGGTAGTGACAATGATAGAGTCAAGGCAGTTGAACAAGCCGGAGGTAAAGCT
TATGTCACTGAAGCTAATTATGATGATACCGTAATCTTTGCTTCCCAAAAAGCCCAGGAAGAAGGTTGGATTTTAGTACA
AGATACTGCCTTTGATTCTTACACTAAAATACCGGGCTGGATAATGGAAGGCTATTCAATGATAGCCAAGGAAATAGTGG
ATTATTTTAATGCTCAAGAATCAAGTCAATTCCCCACCCATCTGATTATTCAGGCAGGAGTTGGTTCTCTGGCGGGAGGG
GTATTAGATTACCTGGTCAATAGATTAGGAGAACAAATTCCCAATATAATTGTGGTTGAACCGGAAAATGCCGCCTGTAT
GCTTAATTCGGCCTTGGAAGAAGGGGGTACAGCTAAAAGAATATTTGGTGACTTGGATACTATTATGACAGGTTTGTCTT
GTGGTGCTCCTAATCCCTTAGGGTGGAAAGGAATAAAAGATGCAACTAATACATTCATATCAGTACCGGACTGGGTAGCA
GCCAGAGGGCTTAGAATTTTACATAATCCTCATGGAAGGGATCCTATAGTGCAAGCTGGTTTTTCTGGAAGCCCTGGTAT
AGGATTGCTTTCATTATTTGAATTCGATCATTTTACTGGATTAAAGGATTGGTTGGAAATAGATGAAGAATCAGTAGTTT
TAACTATAAATACTGAAAGTGTAACAGACCATGGTAATTACAAAAGTGTTATGTGGGATGGCCATCCTTGTACTCCGGTA
AATGGAGATTTTGACTGGAAAGCGCTTTTATGA

Upstream 100 bases:

>100_bases
ATATTAAAGGTATTAAGGTCACGCTTTCACCATCCTTTAGGAAAATACATGAATTGATCCGGATAAGGTGGTTTTAAATT
TAGTTTAAGGAGTTGTTTTG

Downstream 100 bases:

>100_bases
TTTAGCTGTGTTAAAGTTGAATGTTGATAGTTGAACTCTTCAATTTCACATCAAATGTTTCGGGTTGGTCCATCTAAAAC
TCCCCAACAGTAGAATTAAA

Product: diaminopropionate ammonia-lyase

Products: NA

Alternate protein names: Diaminopropionatase; Alpha,beta-diaminopropionate ammonia-lyase [H]

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MILTCRNQYRSEKLLVNQNQLDYIEQVVKFYQKITNYQPTPQISLHDMANSIGVKNIFVKDESSRLGLDSFKVLGSLYAV
ANIIAEYLGEDLSQLDEQELQSRKVKERVGHLTFVTATDGNHGKGLAYAANFFGHNAVVYLPKGSDNDRVKAVEQAGGKA
YVTEANYDDTVIFASQKAQEEGWILVQDTAFDSYTKIPGWIMEGYSMIAKEIVDYFNAQESSQFPTHLIIQAGVGSLAGG
VLDYLVNRLGEQIPNIIVVEPENAACMLNSALEEGGTAKRIFGDLDTIMTGLSCGAPNPLGWKGIKDATNTFISVPDWVA
ARGLRILHNPHGRDPIVQAGFSGSPGIGLLSLFEFDHFTGLKDWLEIDEESVVLTINTESVTDHGNYKSVMWDGHPCTPV
NGDFDWKALL

Sequences:

>Translated_410_residues
MILTCRNQYRSEKLLVNQNQLDYIEQVVKFYQKITNYQPTPQISLHDMANSIGVKNIFVKDESSRLGLDSFKVLGSLYAV
ANIIAEYLGEDLSQLDEQELQSRKVKERVGHLTFVTATDGNHGKGLAYAANFFGHNAVVYLPKGSDNDRVKAVEQAGGKA
YVTEANYDDTVIFASQKAQEEGWILVQDTAFDSYTKIPGWIMEGYSMIAKEIVDYFNAQESSQFPTHLIIQAGVGSLAGG
VLDYLVNRLGEQIPNIIVVEPENAACMLNSALEEGGTAKRIFGDLDTIMTGLSCGAPNPLGWKGIKDATNTFISVPDWVA
ARGLRILHNPHGRDPIVQAGFSGSPGIGLLSLFEFDHFTGLKDWLEIDEESVVLTINTESVTDHGNYKSVMWDGHPCTPV
NGDFDWKALL
>Mature_410_residues
MILTCRNQYRSEKLLVNQNQLDYIEQVVKFYQKITNYQPTPQISLHDMANSIGVKNIFVKDESSRLGLDSFKVLGSLYAV
ANIIAEYLGEDLSQLDEQELQSRKVKERVGHLTFVTATDGNHGKGLAYAANFFGHNAVVYLPKGSDNDRVKAVEQAGGKA
YVTEANYDDTVIFASQKAQEEGWILVQDTAFDSYTKIPGWIMEGYSMIAKEIVDYFNAQESSQFPTHLIIQAGVGSLAGG
VLDYLVNRLGEQIPNIIVVEPENAACMLNSALEEGGTAKRIFGDLDTIMTGLSCGAPNPLGWKGIKDATNTFISVPDWVA
ARGLRILHNPHGRDPIVQAGFSGSPGIGLLSLFEFDHFTGLKDWLEIDEESVVLTINTESVTDHGNYKSVMWDGHPCTPV
NGDFDWKALL

Specific function: Catalyzes the alpha,beta-elimination reaction of both L- and D-alpha,beta-diaminopropionate, the most suitable substrates to form pyruvate and ammonia. The L- and D-isomers of serine are also degraded, though slowly; it is the only serine dehydratase whic

COG id: COG1171

COG function: function code E; Threonine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789235, Length=388, Percent_Identity=45.360824742268, Blast_Score=335, Evalue=2e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010081
- InterPro:   IPR019871
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.15 [H]

Molecular weight: Translated: 45206; Mature: 45206

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTCRNQYRSEKLLVNQNQLDYIEQVVKFYQKITNYQPTPQISLHDMANSIGVKNIFVK
CEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCEEEEEE
DESSRLGLDSFKVLGSLYAVANIIAEYLGEDLSQLDEQELQSRKVKERVGHLTFVTATDG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
NHGKGLAYAANFFGHNAVVYLPKGSDNDRVKAVEQAGGKAYVTEANYDDTVIFASQKAQE
CCCCCCEEEEHHCCCCEEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCC
EGWILVQDTAFDSYTKIPGWIMEGYSMIAKEIVDYFNAQESSQFPTHLIIQAGVGSLAGG
CCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH
VLDYLVNRLGEQIPNIIVVEPENAACMLNSALEEGGTAKRIFGDLDTIMTGLSCGAPNPL
HHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
GWKGIKDATNTFISVPDWVAARGLRILHNPHGRDPIVQAGFSGSPGIGLLSLFEFDHFTG
CCCCCCHHHHCEEECCHHHHHCCCEEEECCCCCCCCEECCCCCCCCCHHHHHHHHHHHCC
LKDWLEIDEESVVLTINTESVTDHGNYKSVMWDGHPCTPVNGDFDWKALL
CHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MILTCRNQYRSEKLLVNQNQLDYIEQVVKFYQKITNYQPTPQISLHDMANSIGVKNIFVK
CEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCEEEEEE
DESSRLGLDSFKVLGSLYAVANIIAEYLGEDLSQLDEQELQSRKVKERVGHLTFVTATDG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
NHGKGLAYAANFFGHNAVVYLPKGSDNDRVKAVEQAGGKAYVTEANYDDTVIFASQKAQE
CCCCCCEEEEHHCCCCEEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCC
EGWILVQDTAFDSYTKIPGWIMEGYSMIAKEIVDYFNAQESSQFPTHLIIQAGVGSLAGG
CCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH
VLDYLVNRLGEQIPNIIVVEPENAACMLNSALEEGGTAKRIFGDLDTIMTGLSCGAPNPL
HHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
GWKGIKDATNTFISVPDWVAARGLRILHNPHGRDPIVQAGFSGSPGIGLLSLFEFDHFTG
CCCCCCHHHHCEEECCHHHHHCCCEEEECCCCCCCCEECCCCCCCCCHHHHHHHHHHHCC
LKDWLEIDEESVVLTINTESVTDHGNYKSVMWDGHPCTPVNGDFDWKALL
CHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]