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The map label for this gene is ydjA [C]

Identifier: 188585213

GI number: 188585213

Start: 604110

End: 604601

Strand: Reverse

Name: ydjA [C]

Synonym: Nther_0575

Alternate gene names: 188585213

Gene position: 604601-604110 (Counterclockwise)

Preceding gene: 188585215

Following gene: 188585212

Centisome position: 19.1

GC content: 40.45

Gene sequence:

>492_bases
ATGAGCCTAGAACTTTTATTCCAAAGGCGCAGCATTAGAAGCTATCAAGATCGACCCGTAGAAGATGATAAAATCAAAAA
ATTAATAGAAGCTGGTATGGCTGCGCCATCGGCACGGAATATTCGTCCTTGGCATTTTGTAGTAATTAAGGATCGAGAGA
TCCTAAATAAAATCACTGACATCCACCCTTATTCCAGTATGCTAAGAGAAGCCCCCATGGCTATTGCTGTATGTGGCAAA
CATAGTGAACCTTACTGGGTACAAGATTGTTCTGCAGCCATGCAAAATATTTTACTGGCAGCTACTGCTCAAGGTTTAGG
ATCAGTTTGGCTAGGGATCTATCCAAGGGAAGATCGGACTCAGGAAGTTAAAGATTTACTTGATTTGCCAGAAGAGATCT
CACCACTTGGAGTTACAGCCATAGGATATCCTAATGAAACTAAACCTCAAAAGGAAATGTATGAAGAAGATAAGGTGACT
GTTATCGAATAA

Upstream 100 bases:

>100_bases
TTGACTTTCTGAAACTTTTCTGACAAAATTATTATTAACAATCATAAATTATTTGTTCATCAATTGCAAGATTACATATC
CAAAGGGGGTATCAAATCAG

Downstream 100 bases:

>100_bases
GAGTTCAATAGAAAATGAGGTGATATTTTGACATCCAGTAATAAACCAATAATATTCAGTGGTGCTCAACCTTCTGGAAG
TATGACTCTAGGTAATTATA

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSLELLFQRRSIRSYQDRPVEDDKIKKLIEAGMAAPSARNIRPWHFVVIKDREILNKITDIHPYSSMLREAPMAIAVCGK
HSEPYWVQDCSAAMQNILLAATAQGLGSVWLGIYPREDRTQEVKDLLDLPEEISPLGVTAIGYPNETKPQKEMYEEDKVT
VIE

Sequences:

>Translated_163_residues
MSLELLFQRRSIRSYQDRPVEDDKIKKLIEAGMAAPSARNIRPWHFVVIKDREILNKITDIHPYSSMLREAPMAIAVCGK
HSEPYWVQDCSAAMQNILLAATAQGLGSVWLGIYPREDRTQEVKDLLDLPEEISPLGVTAIGYPNETKPQKEMYEEDKVT
VIE
>Mature_162_residues
SLELLFQRRSIRSYQDRPVEDDKIKKLIEAGMAAPSARNIRPWHFVVIKDREILNKITDIHPYSSMLREAPMAIAVCGKH
SEPYWVQDCSAAMQNILLAATAQGLGSVWLGIYPREDRTQEVKDLLDLPEEISPLGVTAIGYPNETKPQKEMYEEDKVTV
IE

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=129, Percent_Identity=31.0077519379845, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 18569; Mature: 18437

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLELLFQRRSIRSYQDRPVEDDKIKKLIEAGMAAPSARNIRPWHFVVIKDREILNKITD
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHC
IHPYSSMLREAPMAIAVCGKHSEPYWVQDCSAAMQNILLAATAQGLGSVWLGIYPREDRT
CCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
QEVKDLLDLPEEISPLGVTAIGYPNETKPQKEMYEEDKVTVIE
HHHHHHHCCHHHCCCCCEEEECCCCCCCCHHHHHCCCCEEEEC
>Mature Secondary Structure 
SLELLFQRRSIRSYQDRPVEDDKIKKLIEAGMAAPSARNIRPWHFVVIKDREILNKITD
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHC
IHPYSSMLREAPMAIAVCGKHSEPYWVQDCSAAMQNILLAATAQGLGSVWLGIYPREDRT
CCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
QEVKDLLDLPEEISPLGVTAIGYPNETKPQKEMYEEDKVTVIE
HHHHHHHCCHHHCCCCCEEEECCCCCCCCHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]