| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585209
Identifier: 188585209
GI number: 188585209
Start: 598571
End: 600427
Strand: Direct
Name: 188585209
Synonym: Nther_0571
Alternate gene names: NA
Gene position: 598571-600427 (Clockwise)
Preceding gene: 188585208
Following gene: 188585210
Centisome position: 18.91
GC content: 38.5
Gene sequence:
>1857_bases ATGTCAAGCAAAGTTTCTATAGCCCAAGTTGGTTGCCAGTATAGTGATGACATTATCGCTGCTAAAATGAAGCAGCTATT TTTTGACACGGGTTTAAATGATTATATAGCTCCAAATAAACAGGTTCTGATTAAGCCCAACCTAGTGGCGGTTCCCCCGG AAGATTTTCGAGGAGCCATTACTCATCCTTTAATAGTTCAAAAACTGTCAGATATAGTCCGATCCTTGGGAGGACAAGTT ATTATTGGTGACTCATCAGCAGTAGGGGTCAACACAGAAGATGTTATCTCTACTACGGGATATGAGAAGCTAAGACAGCA GGGCTATCAAGTTATTGATTTAAAACAGGATTCGGTAGTAGACCTTCAAGTTCCAGGAGGTGGAAAAGCACTGTCCCAGT TGCCTGTAGCCAAAACAGTCAAAGACGTAGATCTAATAATTTCAGTACCAGTTATGAAAACTCATGATCAGGTAGAAGTT AGCCTGAGTATCAAAAATCTAAAAGGACTACTACCAGATAAAATAAAAAAAGCATTTCATAATAAATATGGCCTAGCTAA AGGAGTATCAGATATACTGGCAACTGTGCCTCCAGTGGTTTCAGTCCTAGATGCCACCTATGCATTAGAGGGTATGGGGC CTGTCTATGGAGAATCTGTACCCATGGGACTTATTTTAGCCAGCAGCGATCCTGTGGCCTTAGATTCAATAGCTGCAGGT ATAATGGGTTTGGAGGAAGATGAACTTAAGATTGAGGGAGAATGTTATAATAGGTGTTTAGGTGAATTGAGACGAGATAA GATCACCATCTCAGGTGATGTGACAGATATAGATCAAGTAGCGAGAAGATTTACTCGGATCAAAGATTTGGATTATCAAT TTAATGTTGACTTTGATTTAATATTTAATGAGGAAGTTTGTACAGGCTGTAAAAATACAGTTATGAGCTCCTTAGATGAT ATCCAAACTCAGGGAGTGGAGCCATATTTATCGGGAAAAACTGTATATGCCGGTCCATTAACACAAGGTGAGATTAGTGG TAGCTCCAACTCTATACTGATCGGAAATTGCCTATACAAGCATAAAAGTCAAGGAACTTTTGTGCCCGGATGTCCGCCGG AAAATTTACCTGTAATTGAAGGCCTTGTAGGTGAAGGAAAGATTGCCAGACGTTATACTAGTGAAAATCAAAGTCAGTTT AATCATCCTTGGGGCATTATCTACGATTTAGATAATACATTGATCAACTCAAAAATAAATTTTAATAAAATGAAAGTAGA AGTCATGAATTATCTCCAAGAAGAACAGCTTTTGCCCGAAATTACTAACCTTGAGAAACATACTGCTGCTACCTTGATTC AAACTGCTCGTCAACATTCCACTTTGGATCAGGAACAAGAAGATGGATTGTGGGCTTTAATTACTGCCATTGAAGCTGAA GGCATGGATAAGGCCGAAACAGAACCTGATATCAATGAAGTGATTTCAACTTTAGCTAATGAGTATACTCTGATCGTATT GACTAATAACTCATATAAAGCTGCTATGAAAGCTTTGAAACAATTTGGCTTAGATGAATACTTTCAATTGGTGGTAGGTA GGGAGCAGATGACTAGTTTGAAACCATCTCCTTCTGGTGCGGAATACATCTTAGAGCATTTTGGTGATACTAAAGCTGAA GATTGGGTCATGGTAGGAGATTCTTGGATAGACGCAAAAGCAGCCCAAGATGCTTCAATACCATTTTTAGCCTACAATTG TAATCTACAAGAGTTGATTGACCGGGACATTCCTTGGGAAGAAAATTTAAAGCACCCCTGGGATATAATAAACTATCTAG ATAAATTAAAAAATTAA
Upstream 100 bases:
>100_bases GGTGTTATCTAAAAAGTATTGACCGGCTCAGTAATTTTTTGATAGGTTAAACTAAAAAATAAAATTTATCAGGTATCAGG AATCATAAAGGAGAGGTGTT
Downstream 100 bases:
>100_bases TTTTCAAGGAGGACTAATGATGATTAAGAATGAATGGACGGGATCAGACAATCGTTATCGTACTTATTCCTCTTATTTAA AATCCAAATACGGAGAAAAA
Product: HAD-superfamily hydrolase, subfamily IA, variant 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MSSKVSIAQVGCQYSDDIIAAKMKQLFFDTGLNDYIAPNKQVLIKPNLVAVPPEDFRGAITHPLIVQKLSDIVRSLGGQV IIGDSSAVGVNTEDVISTTGYEKLRQQGYQVIDLKQDSVVDLQVPGGGKALSQLPVAKTVKDVDLIISVPVMKTHDQVEV SLSIKNLKGLLPDKIKKAFHNKYGLAKGVSDILATVPPVVSVLDATYALEGMGPVYGESVPMGLILASSDPVALDSIAAG IMGLEEDELKIEGECYNRCLGELRRDKITISGDVTDIDQVARRFTRIKDLDYQFNVDFDLIFNEEVCTGCKNTVMSSLDD IQTQGVEPYLSGKTVYAGPLTQGEISGSSNSILIGNCLYKHKSQGTFVPGCPPENLPVIEGLVGEGKIARRYTSENQSQF NHPWGIIYDLDNTLINSKINFNKMKVEVMNYLQEEQLLPEITNLEKHTAATLIQTARQHSTLDQEQEDGLWALITAIEAE GMDKAETEPDINEVISTLANEYTLIVLTNNSYKAAMKALKQFGLDEYFQLVVGREQMTSLKPSPSGAEYILEHFGDTKAE DWVMVGDSWIDAKAAQDASIPFLAYNCNLQELIDRDIPWEENLKHPWDIINYLDKLKN
Sequences:
>Translated_618_residues MSSKVSIAQVGCQYSDDIIAAKMKQLFFDTGLNDYIAPNKQVLIKPNLVAVPPEDFRGAITHPLIVQKLSDIVRSLGGQV IIGDSSAVGVNTEDVISTTGYEKLRQQGYQVIDLKQDSVVDLQVPGGGKALSQLPVAKTVKDVDLIISVPVMKTHDQVEV SLSIKNLKGLLPDKIKKAFHNKYGLAKGVSDILATVPPVVSVLDATYALEGMGPVYGESVPMGLILASSDPVALDSIAAG IMGLEEDELKIEGECYNRCLGELRRDKITISGDVTDIDQVARRFTRIKDLDYQFNVDFDLIFNEEVCTGCKNTVMSSLDD IQTQGVEPYLSGKTVYAGPLTQGEISGSSNSILIGNCLYKHKSQGTFVPGCPPENLPVIEGLVGEGKIARRYTSENQSQF NHPWGIIYDLDNTLINSKINFNKMKVEVMNYLQEEQLLPEITNLEKHTAATLIQTARQHSTLDQEQEDGLWALITAIEAE GMDKAETEPDINEVISTLANEYTLIVLTNNSYKAAMKALKQFGLDEYFQLVVGREQMTSLKPSPSGAEYILEHFGDTKAE DWVMVGDSWIDAKAAQDASIPFLAYNCNLQELIDRDIPWEENLKHPWDIINYLDKLKN >Mature_617_residues SSKVSIAQVGCQYSDDIIAAKMKQLFFDTGLNDYIAPNKQVLIKPNLVAVPPEDFRGAITHPLIVQKLSDIVRSLGGQVI IGDSSAVGVNTEDVISTTGYEKLRQQGYQVIDLKQDSVVDLQVPGGGKALSQLPVAKTVKDVDLIISVPVMKTHDQVEVS LSIKNLKGLLPDKIKKAFHNKYGLAKGVSDILATVPPVVSVLDATYALEGMGPVYGESVPMGLILASSDPVALDSIAAGI MGLEEDELKIEGECYNRCLGELRRDKITISGDVTDIDQVARRFTRIKDLDYQFNVDFDLIFNEEVCTGCKNTVMSSLDDI QTQGVEPYLSGKTVYAGPLTQGEISGSSNSILIGNCLYKHKSQGTFVPGCPPENLPVIEGLVGEGKIARRYTSENQSQFN HPWGIIYDLDNTLINSKINFNKMKVEVMNYLQEEQLLPEITNLEKHTAATLIQTARQHSTLDQEQEDGLWALITAIEAEG MDKAETEPDINEVISTLANEYTLIVLTNNSYKAAMKALKQFGLDEYFQLVVGREQMTSLKPSPSGAEYILEHFGDTKAED WVMVGDSWIDAKAAQDASIPFLAYNCNLQELIDRDIPWEENLKHPWDIINYLDKLKN
Specific function: Unknown
COG id: COG2006
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007160 [H]
Pfam domain/function: PF04015 DUF362 [H]
EC number: NA
Molecular weight: Translated: 68127; Mature: 67996
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKVSIAQVGCQYSDDIIAAKMKQLFFDTGLNDYIAPNKQVLIKPNLVAVPPEDFRGAI CCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCEEEECCCEEEECCHHHCCCC THPLIVQKLSDIVRSLGGQVIIGDSSAVGVNTEDVISTTGYEKLRQQGYQVIDLKQDSVV CHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCHHHHHHCCCEEEEECCCCEE DLQVPGGGKALSQLPVAKTVKDVDLIISVPVMKTHDQVEVSLSIKNLKGLLPDKIKKAFH EEECCCCCHHHHHCCHHHHHHCEEEEEEECCCCCCCCEEEEEEEHHHCCCCHHHHHHHHH NKYGLAKGVSDILATVPPVVSVLDATYALEGMGPVYGESVPMGLILASSDPVALDSIAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHH IMGLEEDELKIEGECYNRCLGELRRDKITISGDVTDIDQVARRFTRIKDLDYQFNVDFDL HCCCCCCCEEECHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCEEEECEEEE IFNEEVCTGCKNTVMSSLDDIQTQGVEPYLSGKTVYAGPLTQGEISGSSNSILIGNCLYK EECHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCCCCCEEEEEEHHH HKSQGTFVPGCPPENLPVIEGLVGEGKIARRYTSENQSQFNHPWGIIYDLDNTLINSKIN CCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCHHCCCCCEEEEECCCCEECCCCC FNKMKVEVMNYLQEEQLLPEITNLEKHTAATLIQTARQHSTLDQEQEDGLWALITAIEAE CHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEHHHHC GMDKAETEPDINEVISTLANEYTLIVLTNNSYKAAMKALKQFGLDEYFQLVVGREQMTSL CCCCCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCHHHHHHHHHCHHHHHCC KPSPSGAEYILEHFGDTKAEDWVMVGDSWIDAKAAQDASIPFLAYNCNLQELIDRDIPWE CCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCC ENLKHPWDIINYLDKLKN CCCCCHHHHHHHHHHHCC >Mature Secondary Structure SSKVSIAQVGCQYSDDIIAAKMKQLFFDTGLNDYIAPNKQVLIKPNLVAVPPEDFRGAI CCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCEEEECCCEEEECCHHHCCCC THPLIVQKLSDIVRSLGGQVIIGDSSAVGVNTEDVISTTGYEKLRQQGYQVIDLKQDSVV CHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHCCHHHHHHCCCEEEEECCCCEE DLQVPGGGKALSQLPVAKTVKDVDLIISVPVMKTHDQVEVSLSIKNLKGLLPDKIKKAFH EEECCCCCHHHHHCCHHHHHHCEEEEEEECCCCCCCCEEEEEEEHHHCCCCHHHHHHHHH NKYGLAKGVSDILATVPPVVSVLDATYALEGMGPVYGESVPMGLILASSDPVALDSIAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHH IMGLEEDELKIEGECYNRCLGELRRDKITISGDVTDIDQVARRFTRIKDLDYQFNVDFDL HCCCCCCCEEECHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCEEEECEEEE IFNEEVCTGCKNTVMSSLDDIQTQGVEPYLSGKTVYAGPLTQGEISGSSNSILIGNCLYK EECHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCCCCCEEEEEEHHH HKSQGTFVPGCPPENLPVIEGLVGEGKIARRYTSENQSQFNHPWGIIYDLDNTLINSKIN CCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCHHCCCCCEEEEECCCCEECCCCC FNKMKVEVMNYLQEEQLLPEITNLEKHTAATLIQTARQHSTLDQEQEDGLWALITAIEAE CHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEHHHHC GMDKAETEPDINEVISTLANEYTLIVLTNNSYKAAMKALKQFGLDEYFQLVVGREQMTSL CCCCCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCHHHHHHHHHCHHHHHCC KPSPSGAEYILEHFGDTKAEDWVMVGDSWIDAKAAQDASIPFLAYNCNLQELIDRDIPWE CCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCC ENLKHPWDIINYLDKLKN CCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]