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The map label for this gene is ytqA [H]

Identifier: 188585210

GI number: 188585210

Start: 600447

End: 601424

Strand: Direct

Name: ytqA [H]

Synonym: Nther_0572

Alternate gene names: 188585210

Gene position: 600447-601424 (Clockwise)

Preceding gene: 188585209

Following gene: 188585211

Centisome position: 18.97

GC content: 34.46

Gene sequence:

>978_bases
ATGATTAAGAATGAATGGACGGGATCAGACAATCGTTATCGTACTTATTCCTCTTATTTAAAATCCAAATACGGAGAAAA
AGTTTATAAAATTCCCATCAATCTCCCCGGTACCTGCCCTAATAGAGATGGGGTTATGGGAGAAGAAGGGTGCATATTCT
GTGATGAAGAAGGTTCAGGCTTTGACTGTCTTCCCAATTCTATGGCTATTAAAGAACAAGTAGCCAAGAACAAAGAGTAC
TTTGGAAAAAGGTTTAAAGCCAAGAAATTTATTGTATACTTTCAGGCCTTTTCTAACACCTACTGGCCTTTAGATAAATT
TAAAGAATTCCTTTGGTCGGCAGCAGAAGACCAAGATTTGGTGGGTATTTCAGTATCTACACGTCCAGACTGTATCAATG
AAGCATACTTAGATGTTCTAGAAGAAATCCACCATGAATTTAATTTAGATATAGATGTGGAACTAGGTTTGCAAACTGTT
AATTATAAAACCCTTCAATACATTAATAGGGGCCATACCTTGGCTGAATTTTTAGATGCTATGTGGAGAATAAAACAGCG
TGGATTTTCTACATGTATTCATTTAATACTCAATTTACCTGGAGATAGCTTAGAAGATATTGTTGAATCGGCAAAAATTA
TGAGTGCAGTCAATGCTGATCAAATAAAAATTCATTCCTTGTATGTAGTGGAAGGGACAAAATTGGGAGAGTTGTATAAG
AAGGATGAATTAAATATTATCTCTTTAACTGAGTATGTAAATCGGGTTATCACCTTTTTAGAATATTTATCGCCTCAAAT
AGTAGTACAACGACTTGTTGGTAAAGGTCCTAAAGATAAAGTCATATTTAATAATTGGGATCGAAGTTGGTGGTATTTAA
AAGAGCAAATTGAAAGTGAACTGGAACAGAGAAATACCTGGCAAGGAGCTAAATGTGATTATTTGAATGGCAAAGCTCTA
AAAAGATTTTTGAAATAA

Upstream 100 bases:

>100_bases
ATTGACCGGGACATTCCTTGGGAAGAAAATTTAAAGCACCCCTGGGATATAATAAACTATCTAGATAAATTAAAAAATTA
ATTTTCAAGGAGGACTAATG

Downstream 100 bases:

>100_bases
TTTTTTATGCCAATATCTAACATGGAGAGGAACTCATCCCCTCCATGCCGAATATAAGTAAATACAAATTTATATCTATC
TTTATGTCAATATAAATTAC

Product: conserved hypothetical radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIKNEWTGSDNRYRTYSSYLKSKYGEKVYKIPINLPGTCPNRDGVMGEEGCIFCDEEGSGFDCLPNSMAIKEQVAKNKEY
FGKRFKAKKFIVYFQAFSNTYWPLDKFKEFLWSAAEDQDLVGISVSTRPDCINEAYLDVLEEIHHEFNLDIDVELGLQTV
NYKTLQYINRGHTLAEFLDAMWRIKQRGFSTCIHLILNLPGDSLEDIVESAKIMSAVNADQIKIHSLYVVEGTKLGELYK
KDELNIISLTEYVNRVITFLEYLSPQIVVQRLVGKGPKDKVIFNNWDRSWWYLKEQIESELEQRNTWQGAKCDYLNGKAL
KRFLK

Sequences:

>Translated_325_residues
MIKNEWTGSDNRYRTYSSYLKSKYGEKVYKIPINLPGTCPNRDGVMGEEGCIFCDEEGSGFDCLPNSMAIKEQVAKNKEY
FGKRFKAKKFIVYFQAFSNTYWPLDKFKEFLWSAAEDQDLVGISVSTRPDCINEAYLDVLEEIHHEFNLDIDVELGLQTV
NYKTLQYINRGHTLAEFLDAMWRIKQRGFSTCIHLILNLPGDSLEDIVESAKIMSAVNADQIKIHSLYVVEGTKLGELYK
KDELNIISLTEYVNRVITFLEYLSPQIVVQRLVGKGPKDKVIFNNWDRSWWYLKEQIESELEQRNTWQGAKCDYLNGKAL
KRFLK
>Mature_325_residues
MIKNEWTGSDNRYRTYSSYLKSKYGEKVYKIPINLPGTCPNRDGVMGEEGCIFCDEEGSGFDCLPNSMAIKEQVAKNKEY
FGKRFKAKKFIVYFQAFSNTYWPLDKFKEFLWSAAEDQDLVGISVSTRPDCINEAYLDVLEEIHHEFNLDIDVELGLQTV
NYKTLQYINRGHTLAEFLDAMWRIKQRGFSTCIHLILNLPGDSLEDIVESAKIMSAVNADQIKIHSLYVVEGTKLGELYK
KDELNIISLTEYVNRVITFLEYLSPQIVVQRLVGKGPKDKVIFNNWDRSWWYLKEQIESELEQRNTWQGAKCDYLNGKAL
KRFLK

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=276, Percent_Identity=30.7971014492754, Blast_Score=168, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37766; Mature: 37766

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNEWTGSDNRYRTYSSYLKSKYGEKVYKIPINLPGTCPNRDGVMGEEGCIFCDEEGSG
CCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCC
FDCLPNSMAIKEQVAKNKEYFGKRFKAKKFIVYFQAFSNTYWPLDKFKEFLWSAAEDQDL
CCCCCCHHHHHHHHHHCHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCCCE
VGISVSTRPDCINEAYLDVLEEIHHEFNLDIDVELGLQTVNYKTLQYINRGHTLAEFLDA
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCEECCHHHHHHHHCCCHHHHHHHH
MWRIKQRGFSTCIHLILNLPGDSLEDIVESAKIMSAVNADQIKIHSLYVVEGTKLGELYK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHH
KDELNIISLTEYVNRVITFLEYLSPQIVVQRLVGKGPKDKVIFNNWDRSWWYLKEQIESE
HCCCCEEHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHH
LEQRNTWQGAKCDYLNGKALKRFLK
HHHCCCCCCCCCCCCCHHHHHHHHC
>Mature Secondary Structure
MIKNEWTGSDNRYRTYSSYLKSKYGEKVYKIPINLPGTCPNRDGVMGEEGCIFCDEEGSG
CCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCC
FDCLPNSMAIKEQVAKNKEYFGKRFKAKKFIVYFQAFSNTYWPLDKFKEFLWSAAEDQDL
CCCCCCHHHHHHHHHHCHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCCCE
VGISVSTRPDCINEAYLDVLEEIHHEFNLDIDVELGLQTVNYKTLQYINRGHTLAEFLDA
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCEECCHHHHHHHHCCCHHHHHHHH
MWRIKQRGFSTCIHLILNLPGDSLEDIVESAKIMSAVNADQIKIHSLYVVEGTKLGELYK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHH
KDELNIISLTEYVNRVITFLEYLSPQIVVQRLVGKGPKDKVIFNNWDRSWWYLKEQIESE
HCCCCEEHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHH
LEQRNTWQGAKCDYLNGKALKRFLK
HHHCCCCCCCCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]