| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is 188585140
Identifier: 188585140
GI number: 188585140
Start: 528343
End: 528849
Strand: Direct
Name: 188585140
Synonym: Nther_0501
Alternate gene names: NA
Gene position: 528343-528849 (Clockwise)
Preceding gene: 188585139
Following gene: 188585141
Centisome position: 16.69
GC content: 36.09
Gene sequence:
>507_bases ATGAAGGGACGAGATTATACTTATCTGGGTACTGCTTGCTTACTGTTAGTGTTTTGGTTAATTATGGTCAGTGAGCTCAG TTCCTTTGGGATAGTAGTAGGCTCTATTGCCAGTATTGGAATTGTGTACTTATTCAGTGAACATCTGTTGACTGTGGAAT ATCGCTTCCCTTTAATATTTCGGAATATTGGCAGATTGATAATATATATTGGTAGTTTAATCTATGAAATAATAATTGCC AATATTCAGGTAGCCAAAATTGTATTATCAATCAATATGGACTTATCGCCGACCTTTGTAAGATTCAAAGGTAAGCTAAA TACCGATACTTCTAAAGCCATATTAGGTAATTCCATCACTCTGACTCCTGGTACTTTAACCGTAGAGATAGAAGAGGACG AGTTTATAATTCACGGATTGACAAAATCCCATGTTCAAGGATTGTTGGATTGGTATATGATAGATTACCTGGTAAAGATG GAGGAGGAAGGTAAACATGGTAGGTAA
Upstream 100 bases:
>100_bases GTGGTGAAATAGAAAATGAGTAAAAATCCCCTGTTGTGTTTTTTTGGACAAAGGAGTAAACTATTAGTGACAATAATATA ATTCAAAGGGGTTTTCCTTT
Downstream 100 bases:
>100_bases CTTTTTTATGTATACGGCAATAGCCCTAGCCATTTTAATCATGGTGAGTTTGTACAGGGCTTATGTAGGACCAGCCTGCT TTGATCGTGTTGTGGCTATA
Product: cation antiporter
Products: NA
Alternate protein names: Sodium/Proton Antiporter ShaE; Multisubunit Sodium/Proton Antiporter MrpE Subunit
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKGRDYTYLGTACLLLVFWLIMVSELSSFGIVVGSIASIGIVYLFSEHLLTVEYRFPLIFRNIGRLIIYIGSLIYEIIIA NIQVAKIVLSINMDLSPTFVRFKGKLNTDTSKAILGNSITLTPGTLTVEIEEDEFIIHGLTKSHVQGLLDWYMIDYLVKM EEEGKHGR
Sequences:
>Translated_168_residues MKGRDYTYLGTACLLLVFWLIMVSELSSFGIVVGSIASIGIVYLFSEHLLTVEYRFPLIFRNIGRLIIYIGSLIYEIIIA NIQVAKIVLSINMDLSPTFVRFKGKLNTDTSKAILGNSITLTPGTLTVEIEEDEFIIHGLTKSHVQGLLDWYMIDYLVKM EEEGKHGR >Mature_168_residues MKGRDYTYLGTACLLLVFWLIMVSELSSFGIVVGSIASIGIVYLFSEHLLTVEYRFPLIFRNIGRLIIYIGSLIYEIIIA NIQVAKIVLSINMDLSPTFVRFKGKLNTDTSKAILGNSITLTPGTLTVEIEEDEFIIHGLTKSHVQGLLDWYMIDYLVKM EEEGKHGR
Specific function: Unknown
COG id: COG1863
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhE subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18966; Mature: 18966
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRDYTYLGTACLLLVFWLIMVSELSSFGIVVGSIASIGIVYLFSEHLLTVEYRFPLIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEECHHHH RNIGRLIIYIGSLIYEIIIANIQVAKIVLSINMDLSPTFVRFKGKLNTDTSKAILGNSIT HHHHHHHHHHHHHHHHHHHHCHHEEEEEEEECCCCCCEEEEEECCCCCCCCHHHCCCEEE LTPGTLTVEIEEDEFIIHGLTKSHVQGLLDWYMIDYLVKMEEEGKHGR ECCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKGRDYTYLGTACLLLVFWLIMVSELSSFGIVVGSIASIGIVYLFSEHLLTVEYRFPLIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEECHHHH RNIGRLIIYIGSLIYEIIIANIQVAKIVLSINMDLSPTFVRFKGKLNTDTSKAILGNSIT HHHHHHHHHHHHHHHHHHHHCHHEEEEEEEECCCCCCEEEEEECCCCCCCCHHHCCCEEE LTPGTLTVEIEEDEFIIHGLTKSHVQGLLDWYMIDYLVKMEEEGKHGR ECCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA