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The map label for this gene is ydfM [H]

Identifier: 188585130

GI number: 188585130

Start: 519632

End: 520696

Strand: Direct

Name: ydfM [H]

Synonym: Nther_0491

Alternate gene names: 188585130

Gene position: 519632-520696 (Clockwise)

Preceding gene: 188585129

Following gene: 188585131

Centisome position: 16.42

GC content: 36.53

Gene sequence:

>1065_bases
TTGTTGCTTTATCATTCATATTCTAGTATTATTACAGGAGAATATCCCGGAAAAATAGAAGACTTTTCTTGCAAAATTGC
TAGTAAGATGTTTAAATTGCTAGTTAGAAGTTTGAGGGGCGATTTTATGGGAAGCAACAAAATTAATAGTTCATCAACTC
AAAAAGTTTCCTTGGTAACTATTACAGTTAACGGTGCTTTAGCAATTTTCAAAGCCATATTTGGCATTTTCTTTAATAGT
GCTGCTTTGTTGGCCGATGCATTTCACTCCATCAGCGATATCCTATCTAGTGGAATAGTTTTTTTGGGTATAAAATTTGC
CAATAAACCCGCGGACAACTCTCACCATTACGGTCATGGTAAACTTGAATCAGTGGCTTCTAAAGTAGTTGCTCTGGTGT
TAATTGTAACAGCTTTGCTACTTGGACATAATGCCATCAATATGTTTTTTCAACCGGCTACTTTGCCTGGAACAGGGGCA
TTGATAGGAGCTTTTGTTTCAATAATAGTGAAAGAATTACTTTATCGTTACAATATTACAATGGGTGAACGCTATCAAAG
TAGTGCTTTAAAGGCTGACGCATGGCACAATCGTTCTGATGCTATCACTTCAGTTGCAGCCTTGATCGGGGTTGCAGGGG
CTCGTCTAGGTTTTCCCGCTTTAGACCCTTTAGGAGCTTTGATAGTATCTGTTTTAATACTTAAAGTAGGTATAGAAATA
TATTTAACATCAATTAAAGAATTAATTGATACAGCCCCTACAACACAAGTGATTTCGGAAATTGAAAGAATCGTAAATGA
AACTGAGGGGATAGAAAATGTACATGATATAAAGGCTAGATATCATGGTACCGACGTATTTGTTGATATTAAAGTGTGTG
TTGATAGAAATAAAACTGTGGCCCAGGGACACCATTATGCAGGAACTGCTAAACACAAGATTATCCATGAAATACCACAA
ATTAGAGATGTTTTAATTCATGTAAATCCTTGCAAAGATGATGTTCCTCAATGTAGTGACTGCCATGAAGCTATTTGCAG
TGAGGCTAAGGAGAGAACATCTTGA

Upstream 100 bases:

>100_bases
AAGTTATATCGTTTTGGATACCTTATAGAGAGGCTGTTCTCAATAGTTTTGGAACAGCCTCTCTTATATTGGTGAAATTG
TATTTGGTGGGCTAGTATCA

Downstream 100 bases:

>100_bases
AAATAAGGATGATGTGTTAAAGGATGATGTATTTATGGAGAAAAAAGAGGCTGAACAAATATTATCTAAGTTGAAAGCTA
ATTACCCTAGTGCGAGAACT

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MLLYHSYSSIITGEYPGKIEDFSCKIASKMFKLLVRSLRGDFMGSNKINSSSTQKVSLVTITVNGALAIFKAIFGIFFNS
AALLADAFHSISDILSSGIVFLGIKFANKPADNSHHYGHGKLESVASKVVALVLIVTALLLGHNAINMFFQPATLPGTGA
LIGAFVSIIVKELLYRYNITMGERYQSSALKADAWHNRSDAITSVAALIGVAGARLGFPALDPLGALIVSVLILKVGIEI
YLTSIKELIDTAPTTQVISEIERIVNETEGIENVHDIKARYHGTDVFVDIKVCVDRNKTVAQGHHYAGTAKHKIIHEIPQ
IRDVLIHVNPCKDDVPQCSDCHEAICSEAKERTS

Sequences:

>Translated_354_residues
MLLYHSYSSIITGEYPGKIEDFSCKIASKMFKLLVRSLRGDFMGSNKINSSSTQKVSLVTITVNGALAIFKAIFGIFFNS
AALLADAFHSISDILSSGIVFLGIKFANKPADNSHHYGHGKLESVASKVVALVLIVTALLLGHNAINMFFQPATLPGTGA
LIGAFVSIIVKELLYRYNITMGERYQSSALKADAWHNRSDAITSVAALIGVAGARLGFPALDPLGALIVSVLILKVGIEI
YLTSIKELIDTAPTTQVISEIERIVNETEGIENVHDIKARYHGTDVFVDIKVCVDRNKTVAQGHHYAGTAKHKIIHEIPQ
IRDVLIHVNPCKDDVPQCSDCHEAICSEAKERTS
>Mature_354_residues
MLLYHSYSSIITGEYPGKIEDFSCKIASKMFKLLVRSLRGDFMGSNKINSSSTQKVSLVTITVNGALAIFKAIFGIFFNS
AALLADAFHSISDILSSGIVFLGIKFANKPADNSHHYGHGKLESVASKVVALVLIVTALLLGHNAINMFFQPATLPGTGA
LIGAFVSIIVKELLYRYNITMGERYQSSALKADAWHNRSDAITSVAALIGVAGARLGFPALDPLGALIVSVLILKVGIEI
YLTSIKELIDTAPTTQVISEIERIVNETEGIENVHDIKARYHGTDVFVDIKVCVDRNKTVAQGHHYAGTAKHKIIHEIPQ
IRDVLIHVNPCKDDVPQCSDCHEAICSEAKERTS

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Homo sapiens, GI57164948, Length=315, Percent_Identity=23.8095238095238, Blast_Score=72, Evalue=8e-13,
Organism=Escherichia coli, GI1790349, Length=270, Percent_Identity=28.1481481481481, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1786966, Length=291, Percent_Identity=25.7731958762887, Blast_Score=73, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6325032, Length=263, Percent_Identity=29.6577946768061, Blast_Score=119, Evalue=9e-28,
Organism=Saccharomyces cerevisiae, GI6323831, Length=255, Percent_Identity=32.5490196078431, Blast_Score=104, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 38430; Mature: 38430

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLYHSYSSIITGEYPGKIEDFSCKIASKMFKLLVRSLRGDFMGSNKINSSSTQKVSLVT
CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE
ITVNGALAIFKAIFGIFFNSAALLADAFHSISDILSSGIVFLGIKFANKPADNSHHYGHG
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCC
KLESVASKVVALVLIVTALLLGHNAINMFFQPATLPGTGALIGAFVSIIVKELLYRYNIT
HHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
MGERYQSSALKADAWHNRSDAITSVAALIGVAGARLGFPALDPLGALIVSVLILKVGIEI
CCCHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
YLTSIKELIDTAPTTQVISEIERIVNETEGIENVHDIKARYHGTDVFVDIKVCVDRNKTV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEEEECCCCHH
AQGHHYAGTAKHKIIHEIPQIRDVLIHVNPCKDDVPQCSDCHEAICSEAKERTS
HCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLYHSYSSIITGEYPGKIEDFSCKIASKMFKLLVRSLRGDFMGSNKINSSSTQKVSLVT
CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE
ITVNGALAIFKAIFGIFFNSAALLADAFHSISDILSSGIVFLGIKFANKPADNSHHYGHG
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCC
KLESVASKVVALVLIVTALLLGHNAINMFFQPATLPGTGALIGAFVSIIVKELLYRYNIT
HHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
MGERYQSSALKADAWHNRSDAITSVAALIGVAGARLGFPALDPLGALIVSVLILKVGIEI
CCCHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
YLTSIKELIDTAPTTQVISEIERIVNETEGIENVHDIKARYHGTDVFVDIKVCVDRNKTV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEEEECCCCHH
AQGHHYAGTAKHKIIHEIPQIRDVLIHVNPCKDDVPQCSDCHEAICSEAKERTS
HCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]