| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585105
Identifier: 188585105
GI number: 188585105
Start: 493668
End: 494945
Strand: Reverse
Name: 188585105
Synonym: Nther_0466
Alternate gene names: NA
Gene position: 494945-493668 (Counterclockwise)
Preceding gene: 188585107
Following gene: 188585073
Centisome position: 15.64
GC content: 33.41
Gene sequence:
>1278_bases ATGGAGATTTTAGGTGTTTTCATAGCAATCATTACAATAATATATCTTGTTAGAAAGAACAAGCATTTAGGGGGAGCCAT GACCTTAGGTGCTTTAATAGTTGCTATTTTTTCAGGAATGACTTTACCCGAAAAAGCTGATACCTTATTTTATAGTGTCA CTCACCCCACTACTGTTAATATTATGCTGATTGTTTTAATGATAAATATTTTCAGCACTATGCTCAAAAAAACTAATAGT CTCGACATTATGCTCAATAGTTTAACTAAATTATTGCCGGATAGACGAATTTTACTAGTAACCATTCCATCTTTAATAGG AATGCTAACAGTACCCGGTGGTGCAGTATTGTCCGCCCCTATGATACAAAATGCTGGGGACCAAATAAATCTATCCAAAG CTAAACTAGCGGCCGCAAACATGTTTTACCGTCACGTTTGGCATTTAATTTTTCCTCTAATTCCCAGTATAATACTTATA TCTGAATTAAGCCAGGTTCCATTGAGGTTTTTCATTCTTTTCAATTTACCCATATTTTTAGTCACTTTTATAATCGGCTT TAAATGGTTATTCAGAAATCATCGCCATAGCTTTTACTCCCATGAAGAGAGTAGTCAATCTTATCAAACTACCCAAAACT ATGATAGTGATGAGGAAAACAATAATTTAATAGCATTTCTCAAAAGTATCTATCCTCTAATATTGGCAGTAGGATTAGGA ATTTTCTCTCCTTTGGATATACCTGTGTCATTATTAATCGGTGTCCTGTTAGCTTCATTAAATTATTTAGATTGGAATGA AAAACCTGTAATTCAAATACGTAATAGAATAATATATTCAATTAAACAATCTAAATATGGTATGGTGCTAACTATTTTAG GAATTATGATTTTTAAAGATTTTGTAGAGGCTTCTGGAGCTGTGGAAACCATGACCGAGTCCTTATTAGCTTCAGGAATT CCTTCTATTTTTCTTGTACTTTTAGTGCCACTTATTACAGCTGCTATTACTGGAGTTAACTCGGCAGCCCTTGGGATAAG TTATCCAATTATGGCACCCTTAATGAATCCTCATGATGGTAATTTAGCTCTTTTAGGGATATTTTATGCTGCCAGCGTAT TTGGCTATTTTTTATCCCCATTTCATCTTTGTCTAATTTTAACTAAAGAGTATTTTCAAACTACCTTTAATAGTCTGTAT CGCGAATTAATATTACCGGCAAGTTTTATGTTAATAGGTGGTATCATTGTAGGTGTTTTCTGGGGAGTATTAAGTTAA
Upstream 100 bases:
>100_bases GTCCCTAACTATTTTCATTTTGTTAACCCTTTGTTAAACTATATCATTAGAATCCAAATCAATAAAATATAATTTTAAAA TAAAAAGGGGTAGTTGTATT
Downstream 100 bases:
>100_bases TATTAGACCTTAAAAAAGTTCTGCCCAAACAAGGGGCAGAACTTTTTGTCATAGCCATTGGATCACATTATATTAGATGG ACTAGTTCTCCAATTTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MEILGVFIAIITIIYLVRKNKHLGGAMTLGALIVAIFSGMTLPEKADTLFYSVTHPTTVNIMLIVLMINIFSTMLKKTNS LDIMLNSLTKLLPDRRILLVTIPSLIGMLTVPGGAVLSAPMIQNAGDQINLSKAKLAAANMFYRHVWHLIFPLIPSIILI SELSQVPLRFFILFNLPIFLVTFIIGFKWLFRNHRHSFYSHEESSQSYQTTQNYDSDEENNNLIAFLKSIYPLILAVGLG IFSPLDIPVSLLIGVLLASLNYLDWNEKPVIQIRNRIIYSIKQSKYGMVLTILGIMIFKDFVEASGAVETMTESLLASGI PSIFLVLLVPLITAAITGVNSAALGISYPIMAPLMNPHDGNLALLGIFYAASVFGYFLSPFHLCLILTKEYFQTTFNSLY RELILPASFMLIGGIIVGVFWGVLS
Sequences:
>Translated_425_residues MEILGVFIAIITIIYLVRKNKHLGGAMTLGALIVAIFSGMTLPEKADTLFYSVTHPTTVNIMLIVLMINIFSTMLKKTNS LDIMLNSLTKLLPDRRILLVTIPSLIGMLTVPGGAVLSAPMIQNAGDQINLSKAKLAAANMFYRHVWHLIFPLIPSIILI SELSQVPLRFFILFNLPIFLVTFIIGFKWLFRNHRHSFYSHEESSQSYQTTQNYDSDEENNNLIAFLKSIYPLILAVGLG IFSPLDIPVSLLIGVLLASLNYLDWNEKPVIQIRNRIIYSIKQSKYGMVLTILGIMIFKDFVEASGAVETMTESLLASGI PSIFLVLLVPLITAAITGVNSAALGISYPIMAPLMNPHDGNLALLGIFYAASVFGYFLSPFHLCLILTKEYFQTTFNSLY RELILPASFMLIGGIIVGVFWGVLS >Mature_425_residues MEILGVFIAIITIIYLVRKNKHLGGAMTLGALIVAIFSGMTLPEKADTLFYSVTHPTTVNIMLIVLMINIFSTMLKKTNS LDIMLNSLTKLLPDRRILLVTIPSLIGMLTVPGGAVLSAPMIQNAGDQINLSKAKLAAANMFYRHVWHLIFPLIPSIILI SELSQVPLRFFILFNLPIFLVTFIIGFKWLFRNHRHSFYSHEESSQSYQTTQNYDSDEENNNLIAFLKSIYPLILAVGLG IFSPLDIPVSLLIGVLLASLNYLDWNEKPVIQIRNRIIYSIKQSKYGMVLTILGIMIFKDFVEASGAVETMTESLLASGI PSIFLVLLVPLITAAITGVNSAALGISYPIMAPLMNPHDGNLALLGIFYAASVFGYFLSPFHLCLILTKEYFQTTFNSLY RELILPASFMLIGGIIVGVFWGVLS
Specific function: Unknown
COG id: COG1906
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47143; Mature: 47143
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEILGVFIAIITIIYLVRKNKHLGGAMTLGALIVAIFSGMTLPEKADTLFYSVTHPTTVN CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHH IMLIVLMINIFSTMLKKTNSLDIMLNSLTKLLPDRRILLVTIPSLIGMLTVPGGAVLSAP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCHHHCCH MIQNAGDQINLSKAKLAAANMFYRHVWHLIFPLIPSIILISELSQVPLRFFILFNLPIFL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTFIIGFKWLFRNHRHSFYSHEESSQSYQTTQNYDSDEENNNLIAFLKSIYPLILAVGLG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IFSPLDIPVSLLIGVLLASLNYLDWNEKPVIQIRNRIIYSIKQSKYGMVLTILGIMIFKD HCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FVEASGAVETMTESLLASGIPSIFLVLLVPLITAAITGVNSAALGISYPIMAPLMNPHDG HHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCCC NLALLGIFYAASVFGYFLSPFHLCLILTKEYFQTTFNSLYRELILPASFMLIGGIIVGVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGVLS HHHCC >Mature Secondary Structure MEILGVFIAIITIIYLVRKNKHLGGAMTLGALIVAIFSGMTLPEKADTLFYSVTHPTTVN CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHH IMLIVLMINIFSTMLKKTNSLDIMLNSLTKLLPDRRILLVTIPSLIGMLTVPGGAVLSAP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCHHHCCH MIQNAGDQINLSKAKLAAANMFYRHVWHLIFPLIPSIILISELSQVPLRFFILFNLPIFL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTFIIGFKWLFRNHRHSFYSHEESSQSYQTTQNYDSDEENNNLIAFLKSIYPLILAVGLG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IFSPLDIPVSLLIGVLLASLNYLDWNEKPVIQIRNRIIYSIKQSKYGMVLTILGIMIFKD HCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FVEASGAVETMTESLLASGIPSIFLVLLVPLITAAITGVNSAALGISYPIMAPLMNPHDG HHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCCCCCC NLALLGIFYAASVFGYFLSPFHLCLILTKEYFQTTFNSLYRELILPASFMLIGGIIVGVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGVLS HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA