| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is fchA [H]
Identifier: 188585067
GI number: 188585067
Start: 448480
End: 449118
Strand: Direct
Name: fchA [H]
Synonym: Nther_0428
Alternate gene names: 188585067
Gene position: 448480-449118 (Clockwise)
Preceding gene: 188585065
Following gene: 188585069
Centisome position: 14.17
GC content: 38.34
Gene sequence:
>639_bases ATGTCTTTAACTGAAAAGACAGTGGAGGAGTTTTTGGAGGTGCTATCAAGTAAAGAACCAGCACCGGGGGGAGGCAGTGT TAGTGCCTTAGCTGGAAGCCTGGGAAGTTGTTTAACCACTATGGTAGGTAATTTAACAATTGGAAAAAAGAGATATCGAA ATTTGGATGAAGCAGAGCAACGCGAATTAGACGAAAAATTTGAACAAGTTCAAAAAATAAAAACTAATTTGGATAATTTA ATTGATAGGGATAAAGAAGCCTTTGATGAGGTGATGGCTGCTGTAAAAATGCCCAAAGAAACTGAAGAGGAAAAAGCCAA GAGAAGGGAAGCTCTTCAAAAAGCAACTCAAACAGCTCTTGAGGTTCCCTTAGAAACTGCTAGGGAATGCTTGAAGGTCT TGCAGTTACAGGAAGCCTTTGCTAGGAATGGGAATCCAAATGCAATAACTGATGTTGGTGTAGGAGCATTAATGGCTTAT GCGGGTATTGAAGGTGCTATCTACAATGTAAAAATAAATTTGAGTGATTTAAAAGATGAAAATTACAAGAAGCAAGTGGA GCAAGAGGTGGAAAAACTTCTTACTGAAGGTCAACAGTTGAAAGAAAAAATTCAGAGTATGGTCGACGAAAAAATGTAG
Upstream 100 bases:
>100_bases GCTATAAAAATGTCCTTTTATTATTTAACATAAATTATGGACGTACCAAAATATGGTATGATAATTTATTATATAGAGCT ATTAATAAGGAGGGATTTGG
Downstream 100 bases:
>100_bases CTATCCTGATGAATACATGGTATGTTAATAAGGGAGCGAGCCAGTCTGCTCCCTTATTATTTATCTTTTTCTAAGTCATA TAAAATTTTGTCTAAATACC
Product: Formiminotransferase-cyclodeaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSLTEKTVEEFLEVLSSKEPAPGGGSVSALAGSLGSCLTTMVGNLTIGKKRYRNLDEAEQRELDEKFEQVQKIKTNLDNL IDRDKEAFDEVMAAVKMPKETEEEKAKRREALQKATQTALEVPLETARECLKVLQLQEAFARNGNPNAITDVGVGALMAY AGIEGAIYNVKINLSDLKDENYKKQVEQEVEKLLTEGQQLKEKIQSMVDEKM
Sequences:
>Translated_212_residues MSLTEKTVEEFLEVLSSKEPAPGGGSVSALAGSLGSCLTTMVGNLTIGKKRYRNLDEAEQRELDEKFEQVQKIKTNLDNL IDRDKEAFDEVMAAVKMPKETEEEKAKRREALQKATQTALEVPLETARECLKVLQLQEAFARNGNPNAITDVGVGALMAY AGIEGAIYNVKINLSDLKDENYKKQVEQEVEKLLTEGQQLKEKIQSMVDEKM >Mature_211_residues SLTEKTVEEFLEVLSSKEPAPGGGSVSALAGSLGSCLTTMVGNLTIGKKRYRNLDEAEQRELDEKFEQVQKIKTNLDNLI DRDKEAFDEVMAAVKMPKETEEEKAKRREALQKATQTALEVPLETARECLKVLQLQEAFARNGNPNAITDVGVGALMAYA GIEGAIYNVKINLSDLKDENYKKQVEQEVEKLLTEGQQLKEKIQSMVDEKM
Specific function: Required for both C1 and C2 metabolism [H]
COG id: COG3404
COG function: function code E; Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyclodeaminase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI46255035, Length=159, Percent_Identity=35.8490566037736, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI11140815, Length=159, Percent_Identity=35.8490566037736, Blast_Score=100, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007044 [H]
Pfam domain/function: PF04961 FTCD_C [H]
EC number: =3.5.4.9 [H]
Molecular weight: Translated: 23597; Mature: 23466
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTEKTVEEFLEVLSSKEPAPGGGSVSALAGSLGSCLTTMVGNLTIGKKRYRNLDEAEQ CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHH RELDEKFEQVQKIKTNLDNLIDRDKEAFDEVMAAVKMPKETEEEKAKRREALQKATQTAL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EVPLETARECLKVLQLQEAFARNGNPNAITDVGVGALMAYAGIEGAIYNVKINLSDLKDE HCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCH NYKKQVEQEVEKLLTEGQQLKEKIQSMVDEKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLTEKTVEEFLEVLSSKEPAPGGGSVSALAGSLGSCLTTMVGNLTIGKKRYRNLDEAEQ CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHH RELDEKFEQVQKIKTNLDNLIDRDKEAFDEVMAAVKMPKETEEEKAKRREALQKATQTAL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EVPLETARECLKVLQLQEAFARNGNPNAITDVGVGALMAYAGIEGAIYNVKINLSDLKDE HCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCH NYKKQVEQEVEKLLTEGQQLKEKIQSMVDEKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7961516; 10215859 [H]