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The map label for this gene is ydiB [H]

Identifier: 188585038

GI number: 188585038

Start: 416124

End: 416606

Strand: Direct

Name: ydiB [H]

Synonym: Nther_0399

Alternate gene names: 188585038

Gene position: 416124-416606 (Clockwise)

Preceding gene: 188585033

Following gene: 188585039

Centisome position: 13.15

GC content: 38.51

Gene sequence:

>483_bases
ATGAACATAAATACCATAGAAGAGCGGCAGACCATCTCAATAGCCGAACAACTTGCAGCATTACTCGGTCCGGGAGATAT
TGTTCTATTGACAGGAGATTTAGGTGCTGGAAAAACCACTTTTACTAAAGGAATAGCTCAGGGCTTGGATATTGATGAAC
CAGTTACAAGTCCAAGCTTTACATTAATGAATCAGTATTCGGGTTCTATACCTTTATATCATTTTGATTTATACCGTATA
GAAGATCCGGAAGAATTTTTGGAACTCGGTATTGAGGAATTTTTATATGGAAAAGGGATTTCTGTAGTTGAATGGAGTGA
AAAGCTACCTGAGTTACCAAATAGTTATCTACAGGTGAGCTTGAAACTTGGAGCTGACCCTGAAGGCAGACAAATAATAA
TCGAACCCTATGGGGGATATTACCAAGAACTGGTATCAAAATTGAGACAAGAGGTGTTTAGTGATGAAGGTACTCGGAAT
TGA

Upstream 100 bases:

>100_bases
CGCCTATGAATTTCACCAGGAAGAATGATATAATAAATTTTATAGAAGGCATAACAGTGTTATTTGCTGATCTGTTCACG
GATGAAAGGGGCGAGAATAT

Downstream 100 bases:

>100_bases
CACTGCCACTAAAACATGTTGTGTTGCATTAATAGACGGGAATAAATTGATGGGTGAATTTATACTGAATAATTTCCAAA
CACATTCGGAGCGGTTAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNINTIEERQTISIAEQLAALLGPGDIVLLTGDLGAGKTTFTKGIAQGLDIDEPVTSPSFTLMNQYSGSIPLYHFDLYRI
EDPEEFLELGIEEFLYGKGISVVEWSEKLPELPNSYLQVSLKLGADPEGRQIIIEPYGGYYQELVSKLRQEVFSDEGTRN

Sequences:

>Translated_160_residues
MNINTIEERQTISIAEQLAALLGPGDIVLLTGDLGAGKTTFTKGIAQGLDIDEPVTSPSFTLMNQYSGSIPLYHFDLYRI
EDPEEFLELGIEEFLYGKGISVVEWSEKLPELPNSYLQVSLKLGADPEGRQIIIEPYGGYYQELVSKLRQEVFSDEGTRN
>Mature_160_residues
MNINTIEERQTISIAEQLAALLGPGDIVLLTGDLGAGKTTFTKGIAQGLDIDEPVTSPSFTLMNQYSGSIPLYHFDLYRI
EDPEEFLELGIEEFLYGKGISVVEWSEKLPELPNSYLQVSLKLGADPEGRQIIIEPYGGYYQELVSKLRQEVFSDEGTRN

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=144, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17805; Mature: 17805

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINTIEERQTISIAEQLAALLGPGDIVLLTGDLGAGKTTFTKGIAQGLDIDEPVTSPSF
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCH
TLMNQYSGSIPLYHFDLYRIEDPEEFLELGIEEFLYGKGISVVEWSEKLPELPNSYLQVS
HHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCEEEEE
LKLGADPEGRQIIIEPYGGYYQELVSKLRQEVFSDEGTRN
EEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNINTIEERQTISIAEQLAALLGPGDIVLLTGDLGAGKTTFTKGIAQGLDIDEPVTSPSF
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCH
TLMNQYSGSIPLYHFDLYRIEDPEEFLELGIEEFLYGKGISVVEWSEKLPELPNSYLQVS
HHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCEEEEE
LKLGADPEGRQIIIEPYGGYYQELVSKLRQEVFSDEGTRN
EEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]