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The map label for this gene is tldD [C]

Identifier: 188585036

GI number: 188585036

Start: 413260

End: 414642

Strand: Reverse

Name: tldD [C]

Synonym: Nther_0397

Alternate gene names: 188585036

Gene position: 414642-413260 (Counterclockwise)

Preceding gene: 188585037

Following gene: 188585035

Centisome position: 13.1

GC content: 39.62

Gene sequence:

>1383_bases
TTGAGAGACTTTTTACAATCCGCTCTCAAAGGGAAGTCTGCCGATTTTATAGAAATACGAGTCCAAAAAACTTTACAAAA
TAGAATTGAATTCCAAGGCCAGGACTTAGATAGAATTGATTCTTCAAATGACTATGGTGGAAATGTTAGAGCAATAGTAG
ATGGAGGAGTTGGATTTGTCTCCTTTAACAAATTAGACGATATACATGAAAAGGTTAATTTGGCCATTGAACAAGCTAAA
TTAATTGGCGATAGGATCCCTGAAAATACTAGCTTTTCTGATGTAGAGCCTGTAGTTGATCATGTCACTGTTGAACCACA
AGAAGATCCTCGCAAATTGAGCTTAACCCAAAAGAAAGAGCTTTTAGAAGAATACAATGATATTATACTTAGTTACGGGA
AACCGGTTACAAGTTCTAGAATTAGATATTTTGATAATTTTACAAAACTTTACTACATAAATACTGATGGCAGTTATATT
GAACAAGAGAAATTAGATTTAGGTGGCGGCATTATAGCTATTGCAGCTGATCAGGGTCATTCACAAATGTCAGTTGTGGG
TTTTGGAAGTTCTGATGACTTCGGTGTTGTTAGGAATTTACATGACCGAATAAATAAAGCCTGCCAAAAAGCCACCCAAA
TGACCAAGGCAGATCCCATAAAGGGTGGCAGTTACCCCGTGATTTTGGATCCATCCTTGGCAGGTGTTTTTGTTCACGAA
GCTTTCGGACACTTAAGTGAAAGTGATCAACTCTACGAAAACAAACGTTTAAGAGAAATTATGAAATTAGGCACCAAATT
TGGTGGCAGACACTTGAATATATACGACACCGGTGATACACCAGGTGCCAGAGGATATTTAAAGTATGACGACGAAGGAG
TTAGAACCCAAAAAACAGATTTAATTAAAGAAGGAGAACTAGTAGGAAGACTCCACACCCGTGAAAGTGCCGCTAAAATG
GGAGAAAAACCAACTGGAAATGCTAGGGCAATAAATTATAATCATCCTCCAATTTGCAGGATGCGAACAACATGTATAGC
ACCCGGGGACGCCACCTGGGAAGATATGATAAAAGACGTGAAACTGGGAGTTTATGCAGTAGATGCTTACGGCGGCCAGA
CAAACGGTGAAATGTTTACATTTAAGGCCGGGGAAGCCTACATGATCAGAGATGGAAAACTTGCAGAAATGGTTCGGGAC
GTGAATTTGACCGGAAATGTCTTCGAAACCTTGAATAATATAGATCTGATTTCTAGCGATTATCAGGTTAAAGATACTGG
CGGTGGATGTGGAAAAGGTGAGCAAGGTCCCCTCCCAACCAGTCAAGGCTCACCTTCGATCAGGATTCAGAATGTAATTA
TAGGAGGGAAATCCGATGGATAA

Upstream 100 bases:

>100_bases
TAAAGTTTCTATTTTTATCAAAAGGATATCAAATAATCCATCAAGAATTTATAGTAGGCAAAGATACATCTATTTTAAAC
AATAAGGAGGTTGAACTATC

Downstream 100 bases:

>100_bases
ACTGCTCTCTTTAGCAAAGAAAAAAAACGAACAAGCAGAACTGTTTGAGGTGTCTGTAACCAGGACTCCAGTTGAATTCG
AAAATAACAAACTTAAAAAC

Product: peptidase U62 modulator of DNA gyrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MRDFLQSALKGKSADFIEIRVQKTLQNRIEFQGQDLDRIDSSNDYGGNVRAIVDGGVGFVSFNKLDDIHEKVNLAIEQAK
LIGDRIPENTSFSDVEPVVDHVTVEPQEDPRKLSLTQKKELLEEYNDIILSYGKPVTSSRIRYFDNFTKLYYINTDGSYI
EQEKLDLGGGIIAIAADQGHSQMSVVGFGSSDDFGVVRNLHDRINKACQKATQMTKADPIKGGSYPVILDPSLAGVFVHE
AFGHLSESDQLYENKRLREIMKLGTKFGGRHLNIYDTGDTPGARGYLKYDDEGVRTQKTDLIKEGELVGRLHTRESAAKM
GEKPTGNARAINYNHPPICRMRTTCIAPGDATWEDMIKDVKLGVYAVDAYGGQTNGEMFTFKAGEAYMIRDGKLAEMVRD
VNLTGNVFETLNNIDLISSDYQVKDTGGGCGKGEQGPLPTSQGSPSIRIQNVIIGGKSDG

Sequences:

>Translated_460_residues
MRDFLQSALKGKSADFIEIRVQKTLQNRIEFQGQDLDRIDSSNDYGGNVRAIVDGGVGFVSFNKLDDIHEKVNLAIEQAK
LIGDRIPENTSFSDVEPVVDHVTVEPQEDPRKLSLTQKKELLEEYNDIILSYGKPVTSSRIRYFDNFTKLYYINTDGSYI
EQEKLDLGGGIIAIAADQGHSQMSVVGFGSSDDFGVVRNLHDRINKACQKATQMTKADPIKGGSYPVILDPSLAGVFVHE
AFGHLSESDQLYENKRLREIMKLGTKFGGRHLNIYDTGDTPGARGYLKYDDEGVRTQKTDLIKEGELVGRLHTRESAAKM
GEKPTGNARAINYNHPPICRMRTTCIAPGDATWEDMIKDVKLGVYAVDAYGGQTNGEMFTFKAGEAYMIRDGKLAEMVRD
VNLTGNVFETLNNIDLISSDYQVKDTGGGCGKGEQGPLPTSQGSPSIRIQNVIIGGKSDG
>Mature_460_residues
MRDFLQSALKGKSADFIEIRVQKTLQNRIEFQGQDLDRIDSSNDYGGNVRAIVDGGVGFVSFNKLDDIHEKVNLAIEQAK
LIGDRIPENTSFSDVEPVVDHVTVEPQEDPRKLSLTQKKELLEEYNDIILSYGKPVTSSRIRYFDNFTKLYYINTDGSYI
EQEKLDLGGGIIAIAADQGHSQMSVVGFGSSDDFGVVRNLHDRINKACQKATQMTKADPIKGGSYPVILDPSLAGVFVHE
AFGHLSESDQLYENKRLREIMKLGTKFGGRHLNIYDTGDTPGARGYLKYDDEGVRTQKTDLIKEGELVGRLHTRESAAKM
GEKPTGNARAINYNHPPICRMRTTCIAPGDATWEDMIKDVKLGVYAVDAYGGQTNGEMFTFKAGEAYMIRDGKLAEMVRD
VNLTGNVFETLNNIDLISSDYQVKDTGGGCGKGEQGPLPTSQGSPSIRIQNVIIGGKSDG

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=265, Percent_Identity=33.2075471698113, Blast_Score=139, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 50710; Mature: 50710

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFLQSALKGKSADFIEIRVQKTLQNRIEFQGQDLDRIDSSNDYGGNVRAIVDGGVGFV
CHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCEE
SFNKLDDIHEKVNLAIEQAKLIGDRIPENTSFSDVEPVVDHVTVEPQEDPRKLSLTQKKE
EECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCEECCCCCCCCCCCHHHHHH
LLEEYNDIILSYGKPVTSSRIRYFDNFTKLYYINTDGSYIEQEKLDLGGGIIAIAADQGH
HHHHHHHHEEECCCCCCHHHHHHEECCEEEEEECCCCCEEHHHHHCCCCCEEEEEECCCC
SQMSVVGFGSSDDFGVVRNLHDRINKACQKATQMTKADPIKGGSYPVILDPSLAGVFVHE
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHH
AFGHLSESDQLYENKRLREIMKLGTKFGGRHLNIYDTGDTPGARGYLKYDDEGVRTQKTD
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHH
LIKEGELVGRLHTRESAAKMGEKPTGNARAINYNHPPICRMRTTCIAPGDATWEDMIKDV
HHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHH
KLGVYAVDAYGGQTNGEMFTFKAGEAYMIRDGKLAEMVRDVNLTGNVFETLNNIDLISSD
HCCEEEEECCCCCCCCCEEEEECCCEEEEECCHHHHHHHHCCCCCHHHHHHCCCEEECCC
YQVKDTGGGCGKGEQGPLPTSQGSPSIRIQNVIIGGKSDG
CEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
>Mature Secondary Structure
MRDFLQSALKGKSADFIEIRVQKTLQNRIEFQGQDLDRIDSSNDYGGNVRAIVDGGVGFV
CHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCEE
SFNKLDDIHEKVNLAIEQAKLIGDRIPENTSFSDVEPVVDHVTVEPQEDPRKLSLTQKKE
EECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCEECCCCCCCCCCCHHHHHH
LLEEYNDIILSYGKPVTSSRIRYFDNFTKLYYINTDGSYIEQEKLDLGGGIIAIAADQGH
HHHHHHHHEEECCCCCCHHHHHHEECCEEEEEECCCCCEEHHHHHCCCCCEEEEEECCCC
SQMSVVGFGSSDDFGVVRNLHDRINKACQKATQMTKADPIKGGSYPVILDPSLAGVFVHE
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHH
AFGHLSESDQLYENKRLREIMKLGTKFGGRHLNIYDTGDTPGARGYLKYDDEGVRTQKTD
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHH
LIKEGELVGRLHTRESAAKMGEKPTGNARAINYNHPPICRMRTTCIAPGDATWEDMIKDV
HHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHH
KLGVYAVDAYGGQTNGEMFTFKAGEAYMIRDGKLAEMVRDVNLTGNVFETLNNIDLISSD
HCCEEEEECCCCCCCCCEEEEECCCEEEEECCHHHHHHHHCCCCCHHHHHHCCCEEECCC
YQVKDTGGGCGKGEQGPLPTSQGSPSIRIQNVIIGGKSDG
CEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]