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The map label for this gene is 188584946

Identifier: 188584946

GI number: 188584946

Start: 322952

End: 323395

Strand: Direct

Name: 188584946

Synonym: Nther_0305

Alternate gene names: NA

Gene position: 322952-323395 (Clockwise)

Preceding gene: 188584945

Following gene: 188584947

Centisome position: 10.2

GC content: 38.51

Gene sequence:

>444_bases
ATGCGTGCAAAAGACATAATGTCAACGGATATAGTGACAGTTTCCCCTGAAAGTACTGTTGAGGAAGCTGCTAAACTTAT
GGCAGATAGGGAGATTAGCGGAATTCCAGTTATTAATTCACAAAATGACCTTGTTGGAATAATAACTGAAGGGGATTTAC
TTGGAAAACACAAACGGATTTCTCCTCCAGGATATATTGAATTTTTAGGTGGCATAGTCTTTACTGAAAGTCAGGATGAA
TTTTTTGAACAACTTAGAAAATATGTAGCTACTCAAGTAAAGGATTTAATGTCTGACCAAGTTGTTACTGTTGGCCCTGA
AGCTGGCATTGAGGAAATTGCTACTACTATGGATCAAAAAAATGTAAAACGTTTGCCCGTAGTGGGAGAAGGAAAGTTGT
TGGGAATAGTCAGCAGGGCTGACTTGCTGAAAGCTTTGCTATAG

Upstream 100 bases:

>100_bases
CAGATGCATTTCAATATCTTAACGATAAAAGTTAATCAGAGATTATTTTAAAAATATCAGTTTAAGAACGCCAAAAGATT
ACAAGAAAGGGGTTAATAAC

Downstream 100 bases:

>100_bases
ATCGGAGGTGGAACAAATTCCTAGAGTGAAGGGAATATTTATACTTATTATAATCCCTGTAACTCTTATGGTAGTTACTA
CTTCTTGTCAAAAATTAACC

Product: CBS domain containing membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRAKDIMSTDIVTVSPESTVEEAAKLMADREISGIPVINSQNDLVGIITEGDLLGKHKRISPPGYIEFLGGIVFTESQDE
FFEQLRKYVATQVKDLMSDQVVTVGPEAGIEEIATTMDQKNVKRLPVVGEGKLLGIVSRADLLKALL

Sequences:

>Translated_147_residues
MRAKDIMSTDIVTVSPESTVEEAAKLMADREISGIPVINSQNDLVGIITEGDLLGKHKRISPPGYIEFLGGIVFTESQDE
FFEQLRKYVATQVKDLMSDQVVTVGPEAGIEEIATTMDQKNVKRLPVVGEGKLLGIVSRADLLKALL
>Mature_147_residues
MRAKDIMSTDIVTVSPESTVEEAAKLMADREISGIPVINSQNDLVGIITEGDLLGKHKRISPPGYIEFLGGIVFTESQDE
FFEQLRKYVATQVKDLMSDQVVTVGPEAGIEEIATTMDQKNVKRLPVVGEGKLLGIVSRADLLKALL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 16029; Mature: 16029

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAKDIMSTDIVTVSPESTVEEAAKLMADREISGIPVINSQNDLVGIITEGDLLGKHKRI
CCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCCCCCC
SPPGYIEFLGGIVFTESQDEFFEQLRKYVATQVKDLMSDQVVTVGPEAGIEEIATTMDQK
CCCHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHC
NVKRLPVVGEGKLLGIVSRADLLKALL
CCCCCCEECCCCEEEHHHHHHHHHHHC
>Mature Secondary Structure
MRAKDIMSTDIVTVSPESTVEEAAKLMADREISGIPVINSQNDLVGIITEGDLLGKHKRI
CCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCCCCCCCC
SPPGYIEFLGGIVFTESQDEFFEQLRKYVATQVKDLMSDQVVTVGPEAGIEEIATTMDQK
CCCHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHC
NVKRLPVVGEGKLLGIVSRADLLKALL
CCCCCCEECCCCEEEHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]