| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188584947
Identifier: 188584947
GI number: 188584947
Start: 323403
End: 324488
Strand: Direct
Name: 188584947
Synonym: Nther_0306
Alternate gene names: NA
Gene position: 323403-324488 (Clockwise)
Preceding gene: 188584946
Following gene: 188584948
Centisome position: 10.22
GC content: 33.98
Gene sequence:
>1086_bases GTGGAACAAATTCCTAGAGTGAAGGGAATATTTATACTTATTATAATCCCTGTAACTCTTATGGTAGTTACTACTTCTTG TCAAAAATTAACCACAGAGGAGCTACAAACTTGGTCTCAAGAAACTTTGGCTGATCTTGATGATTATTACCTAAGCGGAC ATTTAACGGTAGGAGAGGAAGGGGCAGAAAATTTACGTGACTACGCAGTTGAGGAAAGATATCTCCATCCTAATAAATTA AGAGTTGATATAACTGAAAAAAATCAAGCTACAGGAAGTCACCAAACCTTTATTGCCAAGAATGGAGAAATAGATATTTT CCACCGGGATTTAGAGGAACACTACCATATTTCGGAAGGGGATTTATCAAATAAGTTATCCTTTTTATTTATTAATTTTT TGGAATTAATGGCTGCAGGTGAATTGACCCCTGAGGTTGCCAGTCTTAAAGAAGGTTACAAACTTGAAGGTGTCTTTAAG GAATCGGGTCTTGGAACTTATAGATTATACCTGGATAAAGGGTTATATCCCGAAAAAATCCAATTATATCGAGAAGATAA ATCTTCACCTTATCTAGAACTTGTTTATCAAGAAGTTAAGTGGAATCAATCTCACATAAGCCATACTGACTTTGATGAAA AGTTATTAGAAATGGCCTTTGAAGAACCTTTAGAGCCTAAATGTGAATTACATGAGTATAAAAAGGAAAATTTGGATGAA CTAGCACTTAACTTTGATCCCAAAGTACCAGAGTTAGATGATGAGTTTATTAAATCAATATACGCCTGTGAACATTCTGA CTGGCTTTCTATGAGAATAATTGCTGAAGAAATAGAGGAAAAAATAGAGGAAGAGTATATTGTTACCCAGACCCTCCTAG AAAATAAAGATAAGGAGGATCCAAGTATTTTATCCGATGAAGGTGATTATGAACACAAATCAAAAGAGAATGTAGATTTT TGGTTAGAAACAGTAGAAGACAAGAATATTATTTATTGGCGATATGGAGATATAAAATTTACAATTATAGGAGCTGAGGA CGAAGAAAAAATGTTATCACTGGCAAAGAGTTTTGTAAGTAAGTAG
Upstream 100 bases:
>100_bases GATCAAAAAAATGTAAAACGTTTGCCCGTAGTGGGAGAAGGAAAGTTGTTGGGAATAGTCAGCAGGGCTGACTTGCTGAA AGCTTTGCTATAGATCGGAG
Downstream 100 bases:
>100_bases GTGGGCCTTTTTGGAGGTCCACTATTTTTTCTGATTTAGTAGAATCTTTAAAAAATATATTTAAGGGAGGATAATTTTCT TTTACATTGAATATATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MEQIPRVKGIFILIIIPVTLMVVTTSCQKLTTEELQTWSQETLADLDDYYLSGHLTVGEEGAENLRDYAVEERYLHPNKL RVDITEKNQATGSHQTFIAKNGEIDIFHRDLEEHYHISEGDLSNKLSFLFINFLELMAAGELTPEVASLKEGYKLEGVFK ESGLGTYRLYLDKGLYPEKIQLYREDKSSPYLELVYQEVKWNQSHISHTDFDEKLLEMAFEEPLEPKCELHEYKKENLDE LALNFDPKVPELDDEFIKSIYACEHSDWLSMRIIAEEIEEKIEEEYIVTQTLLENKDKEDPSILSDEGDYEHKSKENVDF WLETVEDKNIIYWRYGDIKFTIIGAEDEEKMLSLAKSFVSK
Sequences:
>Translated_361_residues MEQIPRVKGIFILIIIPVTLMVVTTSCQKLTTEELQTWSQETLADLDDYYLSGHLTVGEEGAENLRDYAVEERYLHPNKL RVDITEKNQATGSHQTFIAKNGEIDIFHRDLEEHYHISEGDLSNKLSFLFINFLELMAAGELTPEVASLKEGYKLEGVFK ESGLGTYRLYLDKGLYPEKIQLYREDKSSPYLELVYQEVKWNQSHISHTDFDEKLLEMAFEEPLEPKCELHEYKKENLDE LALNFDPKVPELDDEFIKSIYACEHSDWLSMRIIAEEIEEKIEEEYIVTQTLLENKDKEDPSILSDEGDYEHKSKENVDF WLETVEDKNIIYWRYGDIKFTIIGAEDEEKMLSLAKSFVSK >Mature_361_residues MEQIPRVKGIFILIIIPVTLMVVTTSCQKLTTEELQTWSQETLADLDDYYLSGHLTVGEEGAENLRDYAVEERYLHPNKL RVDITEKNQATGSHQTFIAKNGEIDIFHRDLEEHYHISEGDLSNKLSFLFINFLELMAAGELTPEVASLKEGYKLEGVFK ESGLGTYRLYLDKGLYPEKIQLYREDKSSPYLELVYQEVKWNQSHISHTDFDEKLLEMAFEEPLEPKCELHEYKKENLDE LALNFDPKVPELDDEFIKSIYACEHSDWLSMRIIAEEIEEKIEEEYIVTQTLLENKDKEDPSILSDEGDYEHKSKENVDF WLETVEDKNIIYWRYGDIKFTIIGAEDEEKMLSLAKSFVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42152; Mature: 42152
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQIPRVKGIFILIIIPVTLMVVTTSCQKLTTEELQTWSQETLADLDDYYLSGHLTVGEE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECCH GAENLRDYAVEERYLHPNKLRVDITEKNQATGSHQTFIAKNGEIDIFHRDLEEHYHISEG HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCEEEEEHHHHHHCCCCCC DLSNKLSFLFINFLELMAAGELTPEVASLKEGYKLEGVFKESGLGTYRLYLDKGLYPEKI CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCHHHH QLYREDKSSPYLELVYQEVKWNQSHISHTDFDEKLLEMAFEEPLEPKCELHEYKKENLDE HHHHCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHH LALNFDPKVPELDDEFIKSIYACEHSDWLSMRIIAEEIEEKIEEEYIVTQTLLENKDKED HHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PSILSDEGDYEHKSKENVDFWLETVEDKNIIYWRYGDIKFTIIGAEDEEKMLSLAKSFVS CCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHC K C >Mature Secondary Structure MEQIPRVKGIFILIIIPVTLMVVTTSCQKLTTEELQTWSQETLADLDDYYLSGHLTVGEE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECCH GAENLRDYAVEERYLHPNKLRVDITEKNQATGSHQTFIAKNGEIDIFHRDLEEHYHISEG HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCEEEEEHHHHHHCCCCCC DLSNKLSFLFINFLELMAAGELTPEVASLKEGYKLEGVFKESGLGTYRLYLDKGLYPEKI CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCHHHH QLYREDKSSPYLELVYQEVKWNQSHISHTDFDEKLLEMAFEEPLEPKCELHEYKKENLDE HHHHCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHH LALNFDPKVPELDDEFIKSIYACEHSDWLSMRIIAEEIEEKIEEEYIVTQTLLENKDKED HHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PSILSDEGDYEHKSKENVDFWLETVEDKNIIYWRYGDIKFTIIGAEDEEKMLSLAKSFVS CCCCCCCCCCCCCCCCCHHHHHEEECCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA