| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188584900
Identifier: 188584900
GI number: 188584900
Start: 272352
End: 273278
Strand: Direct
Name: 188584900
Synonym: Nther_0258
Alternate gene names: NA
Gene position: 272352-273278 (Clockwise)
Preceding gene: 188584899
Following gene: 188584901
Centisome position: 8.6
GC content: 30.64
Gene sequence:
>927_bases GTGAAGGTTAAGCATAAGCTTCAGAACTTTAAAAAAGATTATCACAAAAGCATTGACATCCCTGAAGAGATTGATGATTA TATAATGAAAGGAGTTGAAAAAGGAATGCAAGAAAAAGCCAGAAAAAATTTTAAAAATAAAATTAAAAAAATAAGTCTAA GTGTTGCCGCTTCTCTTTTGTTGATTTTTACAGTTAGTATTAATACAATGCCTACTTTTGCAAATGCTATGCACGATATT CCGATAGCAGGACAGTTAGTGAGGATACTACATTTTAGTGAAGAACATCAGGAAGGTGGTAAAATTACTGATGGAAGTGA CGTAGAGTTTATTTCATTGGTCGAAAAGGATAACAAAGAGCACATAGTAATAAATTTTTCTCAGGACATAAAAGAAGAGG AGTTTGCAAGCCACTATGAAATTGATTACAGTGAATACCCATACACTTTAAATTTTAAAATTTCAGGTGTTAGAGAATTT TCAGCTGAGGATGAATTTGAAAAGATGAAGGACGGAAATATGATACAGGATATATATAGATTAATGACACTAGACGATTC TATGGTAAGGTTTTCAATTACTATGGATAAGCCTTTCTCATATCAAGTGACAGAATATAAAGAACCAGGACAGTTAGTTG TCACTTTAGAAGAAAAACCAGAAAGTAAAGAAGAATCTATATATTCGATTAGAAGTGAATCATATCCCTATGGTGAAAAG ATTGGAATATTAGAGGAACAGCTATTTTCGCTCGATACTAGAAGGATGTTAAAAGATGAAGATGAAGAATTTTTAATAGA AGTAGATTATTTCACTAGTAAAGAAAAAGCAGAAGATAAAAAGAAAGGTTTAATAGAAGAATACCCAGTAATTTCTGATT TTGTAATAGAAAAAAGAGGACCCAATGATATACCTAAAAATTATTAA
Upstream 100 bases:
>100_bases GAAATATCAGAAATATTAGGTTATCCATTAAATACTGTTAAAACAAACTTTTATAGAGGTTTAAAGAAAATTAAAGATAA TTTGGAAGGAGGTTATAATA
Downstream 100 bases:
>100_bases GTGAAAGATGAGCTAATCTTATATATTTGTCCCCAAAAATAAATGGTAAAAAATTTAAATCCACCCCTAAGGTGATGTAT ATTATGCTTCAAAGCTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKVKHKLQNFKKDYHKSIDIPEEIDDYIMKGVEKGMQEKARKNFKNKIKKISLSVAASLLLIFTVSINTMPTFANAMHDI PIAGQLVRILHFSEEHQEGGKITDGSDVEFISLVEKDNKEHIVINFSQDIKEEEFASHYEIDYSEYPYTLNFKISGVREF SAEDEFEKMKDGNMIQDIYRLMTLDDSMVRFSITMDKPFSYQVTEYKEPGQLVVTLEEKPESKEESIYSIRSESYPYGEK IGILEEQLFSLDTRRMLKDEDEEFLIEVDYFTSKEKAEDKKKGLIEEYPVISDFVIEKRGPNDIPKNY
Sequences:
>Translated_308_residues MKVKHKLQNFKKDYHKSIDIPEEIDDYIMKGVEKGMQEKARKNFKNKIKKISLSVAASLLLIFTVSINTMPTFANAMHDI PIAGQLVRILHFSEEHQEGGKITDGSDVEFISLVEKDNKEHIVINFSQDIKEEEFASHYEIDYSEYPYTLNFKISGVREF SAEDEFEKMKDGNMIQDIYRLMTLDDSMVRFSITMDKPFSYQVTEYKEPGQLVVTLEEKPESKEESIYSIRSESYPYGEK IGILEEQLFSLDTRRMLKDEDEEFLIEVDYFTSKEKAEDKKKGLIEEYPVISDFVIEKRGPNDIPKNY >Mature_308_residues MKVKHKLQNFKKDYHKSIDIPEEIDDYIMKGVEKGMQEKARKNFKNKIKKISLSVAASLLLIFTVSINTMPTFANAMHDI PIAGQLVRILHFSEEHQEGGKITDGSDVEFISLVEKDNKEHIVINFSQDIKEEEFASHYEIDYSEYPYTLNFKISGVREF SAEDEFEKMKDGNMIQDIYRLMTLDDSMVRFSITMDKPFSYQVTEYKEPGQLVVTLEEKPESKEESIYSIRSESYPYGEK IGILEEQLFSLDTRRMLKDEDEEFLIEVDYFTSKEKAEDKKKGLIEEYPVISDFVIEKRGPNDIPKNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36008; Mature: 36008
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKHKLQNFKKDYHKSIDIPEEIDDYIMKGVEKGMQEKARKNFKNKIKKISLSVAASLL CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIFTVSINTMPTFANAMHDIPIAGQLVRILHFSEEHQEGGKITDGSDVEFISLVEKDNKE HHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC HIVINFSQDIKEEEFASHYEIDYSEYPYTLNFKISGVREFSAEDEFEKMKDGNMIQDIYR EEEEECHHHCCHHHHHHHCCCCCCCCCEEEEEEECCCHHCCCHHHHHHHHCCCHHHHHHH LMTLDDSMVRFSITMDKPFSYQVTEYKEPGQLVVTLEEKPESKEESIYSIRSESYPYGEK HHHCCCCEEEEEEEECCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCC IGILEEQLFSLDTRRMLKDEDEEFLIEVDYFTSKEKAEDKKKGLIEEYPVISDFVIEKRG CHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCHHHCCCHHHHHHCCCC PNDIPKNY CCCCCCCC >Mature Secondary Structure MKVKHKLQNFKKDYHKSIDIPEEIDDYIMKGVEKGMQEKARKNFKNKIKKISLSVAASLL CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIFTVSINTMPTFANAMHDIPIAGQLVRILHFSEEHQEGGKITDGSDVEFISLVEKDNKE HHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC HIVINFSQDIKEEEFASHYEIDYSEYPYTLNFKISGVREFSAEDEFEKMKDGNMIQDIYR EEEEECHHHCCHHHHHHHCCCCCCCCCEEEEEEECCCHHCCCHHHHHHHHCCCHHHHHHH LMTLDDSMVRFSITMDKPFSYQVTEYKEPGQLVVTLEEKPESKEESIYSIRSESYPYGEK HHHCCCCEEEEEEEECCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCC IGILEEQLFSLDTRRMLKDEDEEFLIEVDYFTSKEKAEDKKKGLIEEYPVISDFVIEKRG CHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCHHHCCCHHHHHHCCCC PNDIPKNY CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA