| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188584891
Identifier: 188584891
GI number: 188584891
Start: 262516
End: 264039
Strand: Direct
Name: 188584891
Synonym: Nther_0249
Alternate gene names: NA
Gene position: 262516-264039 (Clockwise)
Preceding gene: 188584890
Following gene: 188584892
Centisome position: 8.29
GC content: 31.96
Gene sequence:
>1524_bases GTGAGTAAACCAAGAATAAGAACTAAGGATTGGCCCTTTGCTAAGAATGTGAAAGCGCGGCTCATGAGAATTAGTAAACC GTATAAAAAGGAGAATAGGTGGTATATCGATGCTTTATTTTATTCCCATAAAACTAAAAGAGTAAGATTAGATATAGCAA GACTATTGAGACTTCACCTCGGGGGTACATACAAAGATGGTGAGTTCATAGGATTTGAATCAGCCATTGAAATGGATATT TCCATACCTAATTCAGTAATTAAAAATAGAAAAATCACCCCATTTCTAAACAAGGATAAATATAATAAAGAATTTGATTA CTATACATTTGGAATTCCCTATAAGGATCATTTCATTGTTATTCCAATAATAGAGCTTGTGCGCGCTGTACTATTGCCTG ATACCTTTTGGATGAATCAAGTAACACAACTGGATGCACTAGATACTTCTTTTGTTAGCTCTATGAGTTCTGAGGTTTTA CAAGTTCAGTTTGATCCGAGTATTAATGTATCCTACGTAAAGCTAAATGAAAAAATCAATCATCTGGCTTGGATAATGAC TAACTCAAATATCTTTAATATGATAGCTGAATTATATAATAATGTTAGTAATGGACAAGGTTTCTTATTTGATTTTGGAT TCACATCTTTAAATATGCAAGTGATGGCAGAACAGGTTGGTAATAAAATTTTTGTGAAGCAAATTAAATCTTTTAGAGGT AAGAAAATAAAAACTCAAAAAATTGAGGTTAGTCATCCAAAGCTATATAAGAATTCCCCTTCAAATGAAACCAGAGATCA ATATCATAAAACTATTAAAATAAGCGGGGATGATAAGGTTTTGGATGCTAGTAAAGATGGAAGTTATAAAGATCAAGATA TTGTCGACGAAAATATCTCAAAATCCGAATACACCAATTATGTAAAAATTACTAGAAACAAAATTCCAAAAAAGAGTAAA AAGCCAATAGAGACAGTTGAAACAGCTAAACTATATAAAGAAGATAGTAATTCCAGGACAACTTCGGATTTAGGCGGTAA AGAAGTTGTACCGCAGTTGGAGTTTCTAAATAACTTTCAGTTCTTAAATATCAATGATTTTGATGAAATTAACCAAGTAT TAGATTTAATTAACGAAAGGGGTAATGTTGTAAGCGTTCAAAGACTTGTCGGAAAGTTAAAAGATCATTGGAGTTACGGA TCATTTTGTGATTTAAAAGATGGTAAAAAAGAAAGAAGATATTTGCTTGGTAAAATAACTTTAAGTAACGGGACAGAGGC AGTCCTTATAGAGATCGAAAGAGAGGATCGAGCTTTAACAACATTAATGTTGGTGTCAGAAAAAACAGCTAACTGGAATA AAATATGCCACGTTGTGCTTAAAGGTCTTGTTAAGAACTCAGGCTCTTGGTCAGCAGAGGTTATAAATAAAATTAAAACA ACTTATGGAATTAGAGAACACAGATTTAAGCATACAAGGACGGATATTCATAAAAAGGAGAAGAGGATTTTTTCTTTTAT CTGA
Upstream 100 bases:
>100_bases TGGGAAATGCAAAGAGAAGCAGGTTTAAATAAAGAAGATTTTAAGAAGCTCAAACCAGAATTAGAAAGGATTATTGATAG TATAAAGGGGGCCATTAGAA
Downstream 100 bases:
>100_bases TAATAATCTACATATAACTGGAGGGATACTTGATTAGATAAATTAAGATCTAGTTAATAGCCATATCTTGGTTTATGGTA CTATCGTTGCAAACTAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MSKPRIRTKDWPFAKNVKARLMRISKPYKKENRWYIDALFYSHKTKRVRLDIARLLRLHLGGTYKDGEFIGFESAIEMDI SIPNSVIKNRKITPFLNKDKYNKEFDYYTFGIPYKDHFIVIPIIELVRAVLLPDTFWMNQVTQLDALDTSFVSSMSSEVL QVQFDPSINVSYVKLNEKINHLAWIMTNSNIFNMIAELYNNVSNGQGFLFDFGFTSLNMQVMAEQVGNKIFVKQIKSFRG KKIKTQKIEVSHPKLYKNSPSNETRDQYHKTIKISGDDKVLDASKDGSYKDQDIVDENISKSEYTNYVKITRNKIPKKSK KPIETVETAKLYKEDSNSRTTSDLGGKEVVPQLEFLNNFQFLNINDFDEINQVLDLINERGNVVSVQRLVGKLKDHWSYG SFCDLKDGKKERRYLLGKITLSNGTEAVLIEIEREDRALTTLMLVSEKTANWNKICHVVLKGLVKNSGSWSAEVINKIKT TYGIREHRFKHTRTDIHKKEKRIFSFI
Sequences:
>Translated_507_residues MSKPRIRTKDWPFAKNVKARLMRISKPYKKENRWYIDALFYSHKTKRVRLDIARLLRLHLGGTYKDGEFIGFESAIEMDI SIPNSVIKNRKITPFLNKDKYNKEFDYYTFGIPYKDHFIVIPIIELVRAVLLPDTFWMNQVTQLDALDTSFVSSMSSEVL QVQFDPSINVSYVKLNEKINHLAWIMTNSNIFNMIAELYNNVSNGQGFLFDFGFTSLNMQVMAEQVGNKIFVKQIKSFRG KKIKTQKIEVSHPKLYKNSPSNETRDQYHKTIKISGDDKVLDASKDGSYKDQDIVDENISKSEYTNYVKITRNKIPKKSK KPIETVETAKLYKEDSNSRTTSDLGGKEVVPQLEFLNNFQFLNINDFDEINQVLDLINERGNVVSVQRLVGKLKDHWSYG SFCDLKDGKKERRYLLGKITLSNGTEAVLIEIEREDRALTTLMLVSEKTANWNKICHVVLKGLVKNSGSWSAEVINKIKT TYGIREHRFKHTRTDIHKKEKRIFSFI >Mature_506_residues SKPRIRTKDWPFAKNVKARLMRISKPYKKENRWYIDALFYSHKTKRVRLDIARLLRLHLGGTYKDGEFIGFESAIEMDIS IPNSVIKNRKITPFLNKDKYNKEFDYYTFGIPYKDHFIVIPIIELVRAVLLPDTFWMNQVTQLDALDTSFVSSMSSEVLQ VQFDPSINVSYVKLNEKINHLAWIMTNSNIFNMIAELYNNVSNGQGFLFDFGFTSLNMQVMAEQVGNKIFVKQIKSFRGK KIKTQKIEVSHPKLYKNSPSNETRDQYHKTIKISGDDKVLDASKDGSYKDQDIVDENISKSEYTNYVKITRNKIPKKSKK PIETVETAKLYKEDSNSRTTSDLGGKEVVPQLEFLNNFQFLNINDFDEINQVLDLINERGNVVSVQRLVGKLKDHWSYGS FCDLKDGKKERRYLLGKITLSNGTEAVLIEIEREDRALTTLMLVSEKTANWNKICHVVLKGLVKNSGSWSAEVINKIKTT YGIREHRFKHTRTDIHKKEKRIFSFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58910; Mature: 58779
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPRIRTKDWPFAKNVKARLMRISKPYKKENRWYIDALFYSHKTKRVRLDIARLLRLHL CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHC GGTYKDGEFIGFESAIEMDISIPNSVIKNRKITPFLNKDKYNKEFDYYTFGIPYKDHFIV CCCCCCCCEECCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEE IPIIELVRAVLLPDTFWMNQVTQLDALDTSFVSSMSSEVLQVQFDPSINVSYVKLNEKIN EEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCC HLAWIMTNSNIFNMIAELYNNVSNGQGFLFDFGFTSLNMQVMAEQVGNKIFVKQIKSFRG EEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCC KKIKTQKIEVSHPKLYKNSPSNETRDQYHKTIKISGDDKVLDASKDGSYKDQDIVDENIS CCEEEEEEECCCCCCCCCCCCCCHHHHHEEEEEECCCCCEEECCCCCCCCCHHHHHCCCC KSEYTNYVKITRNKIPKKSKKPIETVETAKLYKEDSNSRTTSDLGGKEVVPQLEFLNNFQ HHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHCCEE FLNINDFDEINQVLDLINERGNVVSVQRLVGKLKDHWSYGSFCDLKDGKKERRYLLGKIT EECCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCEECCCCCCHHHCEEEEEEE LSNGTEAVLIEIEREDRALTTLMLVSEKTANWNKICHVVLKGLVKNSGSWSAEVINKIKT ECCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH TYGIREHRFKHTRTDIHKKEKRIFSFI HHCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKPRIRTKDWPFAKNVKARLMRISKPYKKENRWYIDALFYSHKTKRVRLDIARLLRLHL CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHC GGTYKDGEFIGFESAIEMDISIPNSVIKNRKITPFLNKDKYNKEFDYYTFGIPYKDHFIV CCCCCCCCEECCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEE IPIIELVRAVLLPDTFWMNQVTQLDALDTSFVSSMSSEVLQVQFDPSINVSYVKLNEKIN EEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCC HLAWIMTNSNIFNMIAELYNNVSNGQGFLFDFGFTSLNMQVMAEQVGNKIFVKQIKSFRG EEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCC KKIKTQKIEVSHPKLYKNSPSNETRDQYHKTIKISGDDKVLDASKDGSYKDQDIVDENIS CCEEEEEEECCCCCCCCCCCCCCHHHHHEEEEEECCCCCEEECCCCCCCCCHHHHHCCCC KSEYTNYVKITRNKIPKKSKKPIETVETAKLYKEDSNSRTTSDLGGKEVVPQLEFLNNFQ HHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHCCEE FLNINDFDEINQVLDLINERGNVVSVQRLVGKLKDHWSYGSFCDLKDGKKERRYLLGKIT EECCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCEECCCCCCHHHCEEEEEEE LSNGTEAVLIEIEREDRALTTLMLVSEKTANWNKICHVVLKGLVKNSGSWSAEVINKIKT ECCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH TYGIREHRFKHTRTDIHKKEKRIFSFI HHCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA