| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188584874
Identifier: 188584874
GI number: 188584874
Start: 240346
End: 240810
Strand: Reverse
Name: 188584874
Synonym: Nther_0232
Alternate gene names: NA
Gene position: 240810-240346 (Counterclockwise)
Preceding gene: 188584876
Following gene: 188584873
Centisome position: 7.61
GC content: 32.9
Gene sequence:
>465_bases ATGCTCCCTTTAATCAAAAGAGAAATTGTTGAAAAAAATTCATGGCTTGATGAACAAGAATTTTTAAACACTATAGCGAT TACTCAGTCTATACCTGGAGCTCTGGCTGTTAATACAGCAATCTATATCGGTTATAATATCAGAGGATATAAAGGTGCTA TTTCTTCACTTCTAGGAGTAATATTACCTTCTTTTTTGATCATCTTAACAATAGTAAGTTTTTTGTTTAGATGGCAAGAC CATCATGTAGTCGAAAGGGTTTTTCAAGGAATTCGGCCAGGTGTTGTAGGATTAATAATTGCAGCTGTATATAAAATTGG GAAACCACTGTTAGCAAAAAATAAAGTTGCTATTCCCATCTTTATTTTAGCCCTTGGTTTAGCTTTACTTGGAGTGCATC CAATTATATTAATTTTATCATTTGGATTGATAGGGGTACTAGTATATCGTAAAGGAGAGAGTTAA
Upstream 100 bases:
>100_bases GTTAATCTATATGATACCTTTCTCTGTTAATAACATATATTTAAAATTATTTTTAGTTTTTTTTCGTTTGGGTGCTTTCA CCTTTGGTGGAGGTTATGCT
Downstream 100 bases:
>100_bases TGCTTCTCTTAGATCTTTTTATAACTTTTGTTAAAATTGGATTATTCAGCTTTGGTGGAGGCTATGTGATGATTCCCCTG ATTAGGGAAGAGATCATTAA
Product: Chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MLPLIKREIVEKNSWLDEQEFLNTIAITQSIPGALAVNTAIYIGYNIRGYKGAISSLLGVILPSFLIILTIVSFLFRWQD HHVVERVFQGIRPGVVGLIIAAVYKIGKPLLAKNKVAIPIFILALGLALLGVHPIILILSFGLIGVLVYRKGES
Sequences:
>Translated_154_residues MLPLIKREIVEKNSWLDEQEFLNTIAITQSIPGALAVNTAIYIGYNIRGYKGAISSLLGVILPSFLIILTIVSFLFRWQD HHVVERVFQGIRPGVVGLIIAAVYKIGKPLLAKNKVAIPIFILALGLALLGVHPIILILSFGLIGVLVYRKGES >Mature_154_residues MLPLIKREIVEKNSWLDEQEFLNTIAITQSIPGALAVNTAIYIGYNIRGYKGAISSLLGVILPSFLIILTIVSFLFRWQD HHVVERVFQGIRPGVVGLIIAAVYKIGKPLLAKNKVAIPIFILALGLALLGVHPIILILSFGLIGVLVYRKGES
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 16898; Mature: 16898
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLIKREIVEKNSWLDEQEFLNTIAITQSIPGALAVNTAIYIGYNIRGYKGAISSLLGV CCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHEEEECCCCCCHHHHHHHHHHH ILPSFLIILTIVSFLFRWQDHHVVERVFQGIRPGVVGLIIAAVYKIGKPLLAKNKVAIPI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHH FILALGLALLGVHPIILILSFGLIGVLVYRKGES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLPLIKREIVEKNSWLDEQEFLNTIAITQSIPGALAVNTAIYIGYNIRGYKGAISSLLGV CCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHEEEECCCCCCHHHHHHHHHHH ILPSFLIILTIVSFLFRWQDHHVVERVFQGIRPGVVGLIIAAVYKIGKPLLAKNKVAIPI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHH FILALGLALLGVHPIILILSFGLIGVLVYRKGES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]