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The map label for this gene is srpC [H]

Identifier: 188584873

GI number: 188584873

Start: 239828

End: 240346

Strand: Reverse

Name: srpC [H]

Synonym: Nther_0231

Alternate gene names: 188584873

Gene position: 240346-239828 (Counterclockwise)

Preceding gene: 188584874

Following gene: 188584827

Centisome position: 7.59

GC content: 35.65

Gene sequence:

>519_bases
ATGCTTCTCTTAGATCTTTTTATAACTTTTGTTAAAATTGGATTATTCAGCTTTGGTGGAGGCTATGTGATGATTCCCCT
GATTAGGGAAGAGATCATTAATACTAAAGGGTGGCTTTCGGAAACTGTATTTCTGGATGTTATCGCCATTGCTGAAATGA
CTCCAGGACCTATTGCAATTAATTCGGCTACCTTTGTAGGTTTTCAAGTAGCTGGTTTTTGGGGAGCTGTTGTTTCTACA
TTGGGTGTTATCACCCCTTCGATTATTTTAATACTTATATCGGCTAAATTCTTACAAAAATACTATCACAAAGTGCAGAT
AAAAAATTTTTTTGCAGGAGTCAGACCAGCAGTAATAGGTCTTATTCTATCTGCCGGAATCGTAATTGCGCAATCGGCTG
TGGTAGATCTGAAAGGTTTATTTATAGCAGTTCTTGTTTTAATTATCATGATAGTTAAACAACCCCATCCAATATTAATG
ATCCTAGTTTCGGGAGTTTTAGGACTAATACTATATTAA

Upstream 100 bases:

>100_bases
TTTTAGCCCTTGGTTTAGCTTTACTTGGAGTGCATCCAATTATATTAATTTTATCATTTGGATTGATAGGGGTACTAGTA
TATCGTAAAGGAGAGAGTTA

Downstream 100 bases:

>100_bases
GGATAGATATCCAATAAAGAAAACTGAATCAATAAATAAAACCTCCAAAGAATTTGGAGGTTTTATTATTATATATATGA
CATAAATATATGGCAAGGAG

Product: Chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MLLLDLFITFVKIGLFSFGGGYVMIPLIREEIINTKGWLSETVFLDVIAIAEMTPGPIAINSATFVGFQVAGFWGAVVST
LGVITPSIILILISAKFLQKYYHKVQIKNFFAGVRPAVIGLILSAGIVIAQSAVVDLKGLFIAVLVLIIMIVKQPHPILM
ILVSGVLGLILY

Sequences:

>Translated_172_residues
MLLLDLFITFVKIGLFSFGGGYVMIPLIREEIINTKGWLSETVFLDVIAIAEMTPGPIAINSATFVGFQVAGFWGAVVST
LGVITPSIILILISAKFLQKYYHKVQIKNFFAGVRPAVIGLILSAGIVIAQSAVVDLKGLFIAVLVLIIMIVKQPHPILM
ILVSGVLGLILY
>Mature_172_residues
MLLLDLFITFVKIGLFSFGGGYVMIPLIREEIINTKGWLSETVFLDVIAIAEMTPGPIAINSATFVGFQVAGFWGAVVST
LGVITPSIILILISAKFLQKYYHKVQIKNFFAGVRPAVIGLILSAGIVIAQSAVVDLKGLFIAVLVLIIMIVKQPHPILM
ILVSGVLGLILY

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 18571; Mature: 18571

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLDLFITFVKIGLFSFGGGYVMIPLIREEIINTKGWLSETVFLDVIAIAEMTPGPIAI
CHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEE
NSATFVGFQVAGFWGAVVSTLGVITPSIILILISAKFLQKYYHKVQIKNFFAGVRPAVIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILSAGIVIAQSAVVDLKGLFIAVLVLIIMIVKQPHPILMILVSGVLGLILY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLLDLFITFVKIGLFSFGGGYVMIPLIREEIINTKGWLSETVFLDVIAIAEMTPGPIAI
CHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEE
NSATFVGFQVAGFWGAVVSTLGVITPSIILILISAKFLQKYYHKVQIKNFFAGVRPAVIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILSAGIVIAQSAVVDLKGLFIAVLVLIIMIVKQPHPILMILVSGVLGLILY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]