Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is flgG

Identifier: 188528376

GI number: 188528376

Start: 1605142

End: 1605930

Strand: Direct

Name: flgG

Synonym: HPSH_08250

Alternate gene names: 188528376

Gene position: 1605142-1605930 (Clockwise)

Preceding gene: 188528375

Following gene: NA

Centisome position: 99.79

GC content: 47.02

Gene sequence:

>789_bases
ATGCTCCGCTCTCTCTATAGCGCCACTTCAGGGATGCTCGCCCAACAAACGCACATTGACACCACTTCAAACAATATCGC
CAATGTCAATACCACCGGGTTTAAAAAATCTCGTGCGGATTTTAACGACTTGTTTTACCAAGCGATGCAATACGCTGGCA
CCAACACAAGCAACACGACTTTATCGCCTGATGGCATGGAGGTGGGCTTGGGCGTGCGCCCTAGTGCGATCACTAAAATG
TTTTCGCAAGGCAGCCCTAAAGAAACGGAAAATAATTTAGATGTCGCCATTACGGGTAAAGGCTTTTTTCAAGTCCAGTT
GCCTGATGGCACCACTGCTTATACAAGAAGCGGGAATTTTAAGCTAGACGAACAGGGTAATCTTGTAACAAGCGAGGGCT
ATCTTTTGATCCCTCAAATCACTTTACCTGAAGACACCACGCAAGTGAATATCGGTGTGGATGGCACGGTGAGCGTGACT
CAAGGCTTGCAAACGACTTCTAATGTGATCGGGCAGATCACGCTGGCTAATTTTGTCAATCCGGCGGGGCTTCATTCTAT
GGGGGATAATTTGTTTTCAATCACCAACGCTAGCGGTGAGGCGATTGTGGGCAACCCGGATTCTCAAGGATTGGGCAAGT
TAAGGCAAGGCTTTTTGGAATTGAGCAATGTGAGATTGGTAGAAGAAATGACGGATCTAATCACCGCTCAAAGGGCTTAT
GAAGCCAATTCTAAAAGCATTCAAACCGCTGATGCCATGCTCCAGACGGTCAATTCCCTCAAACGATAA

Upstream 100 bases:

>100_bases
TAAAAAAGAGAGCGTTAAAACAACGCTTCAATTTTAGTCAAATTTAATCTTGTTTTGGTTATAATTCTAGGTTATTAAGT
TTTAGTTTAAAGGGAAAATC

Downstream 100 bases:

>100_bases
TTGGAACGGTTGTTGCCATTCTTTAATTCTTGTGGCTAGGGTTTTTAAGTTCTTTGAACACCGCTTTCTTGGCTATTGCT
TGCGTTGTTGTTTGGTTGGT

Product: flagellar basal body rod protein FlgG

Products: NA

Alternate protein names: Distal rod protein [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTTLSPDGMEVGLGVRPSAITKM
FSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNFKLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVT
QGLQTTSNVIGQITLANFVNPAGLHSMGDNLFSITNASGEAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY
EANSKSIQTADAMLQTVNSLKR

Sequences:

>Translated_262_residues
MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTTLSPDGMEVGLGVRPSAITKM
FSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNFKLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVT
QGLQTTSNVIGQITLANFVNPAGLHSMGDNLFSITNASGEAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY
EANSKSIQTADAMLQTVNSLKR
>Mature_262_residues
MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTTLSPDGMEVGLGVRPSAITKM
FSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNFKLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVT
QGLQTTSNVIGQITLANFVNPAGLHSMGDNLFSITNASGEAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY
EANSKSIQTADAMLQTVNSLKR

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=260, Percent_Identity=47.3076923076923, Blast_Score=248, Evalue=4e-67,
Organism=Escherichia coli, GI1787316, Length=119, Percent_Identity=42.0168067226891, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787317, Length=261, Percent_Identity=30.6513409961686, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012834 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 28076; Mature: 28076

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT
CCCHHHHHHCCCHHHHEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE
LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNF
ECCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCE
KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN
EECCCCCEEECCCEEEEEEEECCCCCCEEEECCCCEEHHHHCHHHHHHHHHEEHHHHHCC
PAGLHSMGDNLFSITNASGEAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY
CCHHHHHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EANSKSIQTADAMLQTVNSLKR
CCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQYAGTNTSNTT
CCCHHHHHHCCCHHHHEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE
LSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAITGKGFFQVQLPDGTTAYTRSGNF
ECCCCCEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCE
KLDEQGNLVTSEGYLLIPQITLPEDTTQVNIGVDGTVSVTQGLQTTSNVIGQITLANFVN
EECCCCCEEECCCEEEEEEEECCCCCCEEEECCCCEEHHHHCHHHHHHHHHEEHHHHHCC
PAGLHSMGDNLFSITNASGEAIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAY
CCHHHHHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EANSKSIQTADAMLQTVNSLKR
CCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]