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The map label for this gene is 188528314

Identifier: 188528314

GI number: 188528314

Start: 1547259

End: 1547987

Strand: Reverse

Name: 188528314

Synonym: HPSH_07930

Alternate gene names: NA

Gene position: 1547987-1547259 (Counterclockwise)

Preceding gene: 188528322

Following gene: 188528311

Centisome position: 96.24

GC content: 41.43

Gene sequence:

>729_bases
ATGAAAAAATTTTTTTCTAAACCTTTGTTAGCTTTGGTTGTTTCTATAAATGCGCTACTAGCTATGGATGGTAATGGCGT
TTTTTTAGGGGCGGGTTATTTGCAAGGACAAGCCCAAATGCATGCGGATATTAATTCTCAAAAACAAGCCACTAACGCTA
CTATCAAGGGCTTTGATGCACTTTTAGGGTATCAATTTTTCTTTGAAAAACACTTTGGTTTGCGCCTTTATGGGTTTTTT
GACTACGCCCATGCCAACTCTATTAGGCTTAAAAACCCCAACTATAACAGCGAAGCGGTGCAAGTAGCGGGTCAAATTCT
TGGGAAACAAGAAATCAATCGTTTAACAAATATTGCCGATCCCAAAACCTTTGAGCCAAACATGCTCACTTATGGGGGGG
CTATGGATGTGATGGTCAATGTCATCAATAACGGCATCATGAGTTTGGGGGCTTTTGGTGGGGTGCAATTAGCCGGCAAT
TCATGGCTTATGGCGACGCCGAGCTTTGAGGGTATTTTAGTGGAGCAAGCTTTGGTGAGCAAAAAAGCCACTTCTTTCCA
ATTTTTATTCAATGTGGGGGCTCGCTTAAGGATCTTAAAGCATTCTAGCATTGAAGCGGGCGTGAAATTCCCCATGCTGA
AGAAAAACCCCTATATCACTGCAAAAAATTTGGATATAGGGTTTAGGCGCGTGTATTCATGGTATGTGAATTATGTGTTC
ACTTTCTAG

Upstream 100 bases:

>100_bases
AGGAGTTTTTATTTTTATTAATGTTTCATTCTTTAATCGTTTTTAATTGTTTTTTGGGTATTCTTTTTAAGAATGTAAGC
ATTATGTTAAGGAATTATAC

Downstream 100 bases:

>100_bases
GGGCACATCCCTAGAGCTCAAGCACGCTCTCAATGATTTCAATCAGCTCTTCTTTTCTTTTTTCTAGGCTTTTAGGCGTC
CATTCTGTGTAATGGTGTGC

Product: putative outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein HorE; Outer Membrane Protein/Porin; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HopG; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein,HopV SabB SabA; Outer Membrane Protein HopD; Outer Membrane Protein HorF; Outer Membrane Protein,HopV BabB BabA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKKFFSKPLLALVVSINALLAMDGNGVFLGAGYLQGQAQMHADINSQKQATNATIKGFDALLGYQFFFEKHFGLRLYGFF
DYAHANSIRLKNPNYNSEAVQVAGQILGKQEINRLTNIADPKTFEPNMLTYGGAMDVMVNVINNGIMSLGAFGGVQLAGN
SWLMATPSFEGILVEQALVSKKATSFQFLFNVGARLRILKHSSIEAGVKFPMLKKNPYITAKNLDIGFRRVYSWYVNYVF
TF

Sequences:

>Translated_242_residues
MKKFFSKPLLALVVSINALLAMDGNGVFLGAGYLQGQAQMHADINSQKQATNATIKGFDALLGYQFFFEKHFGLRLYGFF
DYAHANSIRLKNPNYNSEAVQVAGQILGKQEINRLTNIADPKTFEPNMLTYGGAMDVMVNVINNGIMSLGAFGGVQLAGN
SWLMATPSFEGILVEQALVSKKATSFQFLFNVGARLRILKHSSIEAGVKFPMLKKNPYITAKNLDIGFRRVYSWYVNYVF
TF
>Mature_242_residues
MKKFFSKPLLALVVSINALLAMDGNGVFLGAGYLQGQAQMHADINSQKQATNATIKGFDALLGYQFFFEKHFGLRLYGFF
DYAHANSIRLKNPNYNSEAVQVAGQILGKQEINRLTNIADPKTFEPNMLTYGGAMDVMVNVINNGIMSLGAFGGVQLAGN
SWLMATPSFEGILVEQALVSKKATSFQFLFNVGARLRILKHSSIEAGVKFPMLKKNPYITAKNLDIGFRRVYSWYVNYVF
TF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26866; Mature: 26866

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFFSKPLLALVVSINALLAMDGNGVFLGAGYLQGQAQMHADINSQKQATNATIKGFDA
CCCHHHHHHHHHHHHHHHEEEECCCEEEEECCEECCCHHEECCCCCCHHHCCCHHHHHHH
LLGYQFFFEKHFGLRLYGFFDYAHANSIRLKNPNYNSEAVQVAGQILGKQEINRLTNIAD
HHHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHCCCC
PKTFEPNMLTYGGAMDVMVNVINNGIMSLGAFGGVQLAGNSWLMATPSFEGILVEQALVS
CCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCHHHHHHHH
KKATSFQFLFNVGARLRILKHSSIEAGVKFPMLKKNPYITAKNLDIGFRRVYSWYVNYVF
HHCCHHHHEECCCCEEEEEECCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHEE
TF
EC
>Mature Secondary Structure
MKKFFSKPLLALVVSINALLAMDGNGVFLGAGYLQGQAQMHADINSQKQATNATIKGFDA
CCCHHHHHHHHHHHHHHHEEEECCCEEEEECCEECCCHHEECCCCCCHHHCCCHHHHHHH
LLGYQFFFEKHFGLRLYGFFDYAHANSIRLKNPNYNSEAVQVAGQILGKQEINRLTNIAD
HHHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHCCCC
PKTFEPNMLTYGGAMDVMVNVINNGIMSLGAFGGVQLAGNSWLMATPSFEGILVEQALVS
CCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCHHHHHHHH
KKATSFQFLFNVGARLRILKHSSIEAGVKFPMLKKNPYITAKNLDIGFRRVYSWYVNYVF
HHCCHHHHEECCCCEEEEEECCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHEE
TF
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA