Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528277

Identifier: 188528277

GI number: 188528277

Start: 1499753

End: 1500904

Strand: Direct

Name: 188528277

Synonym: HPSH_07735

Alternate gene names: NA

Gene position: 1499753-1500904 (Clockwise)

Preceding gene: 188528272

Following gene: 188528279

Centisome position: 93.24

GC content: 41.93

Gene sequence:

>1152_bases
GTGCACAAAATGGGCATGAACAGAGATGTGTTTAAAAATATCATTTTAGCGAGCAGGAGCTTGGACAAATGCTATGCGAT
TAAAGAAAGCATGCTCAAAAAGGGTTTGGGGGAAATCAGCGTTGAGCAAGTGGATGCAGATGATACGCAAGCCTTAGTCG
CTTTAATCAAAAAATACAAGCCTAAAGTCGTTGTTAATGTGGCTTTACCCTATCAGGATTTAACGATCATGCAAGCATGT
TTAGAAACTAAAACGCATTACATTGACACCGCCAATTACGAACACCCAGATTTAGCGAAGTTTGAATACAAAGAGCAATG
GGCGTTTGATAAGGCTTATAAAGAAGTAGGGATTTTAGGGGTTTTAGGGGCTGGGTTTGATCCGGGCGTGACTAACGCTT
ATGTCGCTCACGCTCAAAAACACCATTTTGACACTATCCACACTTTAGATATTTTAGATTGCAACGCTGGGGACCACAAA
CGCCCTTTTGCGACGAATTTTAACCCTGAAATCAATTTGAGGGAAGTCAGCTCTAAAGGGCGTTATTATGAAAATGGCAA
ATGGATTGAAACAAAGCCTTTAGAAATCAAGCAAGTGTGGGCTTACCCACAGATTGGCGAAATGGATTCGTATCTTTTAT
ACCATGAAGAATTGGAATCGTTAGTCAAAAACATTAAAGGCTTGAGGAGGGCGAGGTTTTTTATGACTTTCTCTCAAAAT
TATTTAACCCACATGAAATGCTTAGAAAATGTCGGCATGCTAGGCATTAAAGAAATAGAGCATCAAGGCGCAAAAATCGT
GCCGATACAATTTTTAAAAACCCTGCTTCCCGATCCAGCAACTCTAGCCAAAGACACCACCGGCAAAACCAATATCGGGT
GCTATATGACTGGCATTAAAAACAACCAAGACAAAACGCTCTACATTTACAATGTGTGCGATCACAAGAAATGCTATGAA
GAAGTGGGTTCGCAAGCCATAAGCTACACCACCGGCGTGCCAGCGATGTGCGCGGCTAAAATGATTTGCAATGACACTTG
GAGCGCGGATCATTTTAGGGCCGGGGTGTTTAACATAGAAGAATTAAACACCGATCCCTTCATGGAAGAATTGGTTAGGC
AAGGCTTGCCTTATGAAGTGATTGAGCGCTAG

Upstream 100 bases:

>100_bases
ATAATATAATACCCCCCTAAAAGAACGAGATTAGTTAGAAAGTAGGTGTTCCTTGCATACAGTATTACAAATTGGAGCTG
GTGGCGTAGGCAGTGTGGTA

Downstream 100 bases:

>100_bases
TTTTAGGCTTCAATCCTCACTTGGCGCAATAAACACCGATTCCCTTTCTATCGTAATATCCTTATCATCCGTGCTATAAG
CTTGTATTGTAATGGGGATG

Product: conserved hypothetical ATP-binding protein

Products: NA

Alternate protein names: Carboxynorspermidine Dehydrogenase; Saccharopine Dehydrogenase-Like Protein; Carboxynorspermide Hydratase; Saccharopine Dehydrogenase Family Protein; Acyl Carrier Protein

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MHKMGMNRDVFKNIILASRSLDKCYAIKESMLKKGLGEISVEQVDADDTQALVALIKKYKPKVVVNVALPYQDLTIMQAC
LETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEVGILGVLGAGFDPGVTNAYVAHAQKHHFDTIHTLDILDCNAGDHK
RPFATNFNPEINLREVSSKGRYYENGKWIETKPLEIKQVWAYPQIGEMDSYLLYHEELESLVKNIKGLRRARFFMTFSQN
YLTHMKCLENVGMLGIKEIEHQGAKIVPIQFLKTLLPDPATLAKDTTGKTNIGCYMTGIKNNQDKTLYIYNVCDHKKCYE
EVGSQAISYTTGVPAMCAAKMICNDTWSADHFRAGVFNIEELNTDPFMEELVRQGLPYEVIER

Sequences:

>Translated_383_residues
MHKMGMNRDVFKNIILASRSLDKCYAIKESMLKKGLGEISVEQVDADDTQALVALIKKYKPKVVVNVALPYQDLTIMQAC
LETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEVGILGVLGAGFDPGVTNAYVAHAQKHHFDTIHTLDILDCNAGDHK
RPFATNFNPEINLREVSSKGRYYENGKWIETKPLEIKQVWAYPQIGEMDSYLLYHEELESLVKNIKGLRRARFFMTFSQN
YLTHMKCLENVGMLGIKEIEHQGAKIVPIQFLKTLLPDPATLAKDTTGKTNIGCYMTGIKNNQDKTLYIYNVCDHKKCYE
EVGSQAISYTTGVPAMCAAKMICNDTWSADHFRAGVFNIEELNTDPFMEELVRQGLPYEVIER
>Mature_383_residues
MHKMGMNRDVFKNIILASRSLDKCYAIKESMLKKGLGEISVEQVDADDTQALVALIKKYKPKVVVNVALPYQDLTIMQAC
LETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEVGILGVLGAGFDPGVTNAYVAHAQKHHFDTIHTLDILDCNAGDHK
RPFATNFNPEINLREVSSKGRYYENGKWIETKPLEIKQVWAYPQIGEMDSYLLYHEELESLVKNIKGLRRARFFMTFSQN
YLTHMKCLENVGMLGIKEIEHQGAKIVPIQFLKTLLPDPATLAKDTTGKTNIGCYMTGIKNNQDKTLYIYNVCDHKKCYE
EVGSQAISYTTGVPAMCAAKMICNDTWSADHFRAGVFNIEELNTDPFMEELVRQGLPYEVIER

Specific function: Unknown

COG id: COG1748

COG function: function code E; Saccharopine dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43679; Mature: 43679

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKMGMNRDVFKNIILASRSLDKCYAIKESMLKKGLGEISVEQVDADDTQALVALIKKYK
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCC
PKVVVNVALPYQDLTIMQACLETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEVGILG
CEEEEEEECCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE
VLGAGFDPGVTNAYVAHAQKHHFDTIHTLDILDCNAGDHKRPFATNFNPEINLREVSSKG
EECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCC
RYYENGKWIETKPLEIKQVWAYPQIGEMDSYLLYHEELESLVKNIKGLRRARFFMTFSQN
CEECCCCEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLTHMKCLENVGMLGIKEIEHQGAKIVPIQFLKTLLPDPATLAKDTTGKTNIGCYMTGIK
HHHHHHHHHHCCCCCHHHHHHCCCEEEHHHHHHHHCCCCHHHHCCCCCCCCCCEEEECCC
NNQDKTLYIYNVCDHKKCYEEVGSQAISYTTGVPAMCAAKMICNDTWSADHFRAGVFNIE
CCCCCEEEEEECCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCHHHCCCEEHH
ELNTDPFMEELVRQGLPYEVIER
HCCCCHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MHKMGMNRDVFKNIILASRSLDKCYAIKESMLKKGLGEISVEQVDADDTQALVALIKKYK
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCC
PKVVVNVALPYQDLTIMQACLETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEVGILG
CEEEEEEECCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE
VLGAGFDPGVTNAYVAHAQKHHFDTIHTLDILDCNAGDHKRPFATNFNPEINLREVSSKG
EECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCC
RYYENGKWIETKPLEIKQVWAYPQIGEMDSYLLYHEELESLVKNIKGLRRARFFMTFSQN
CEECCCCEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLTHMKCLENVGMLGIKEIEHQGAKIVPIQFLKTLLPDPATLAKDTTGKTNIGCYMTGIK
HHHHHHHHHHCCCCCHHHHHHCCCEEEHHHHHHHHCCCCHHHHCCCCCCCCCCEEEECCC
NNQDKTLYIYNVCDHKKCYEEVGSQAISYTTGVPAMCAAKMICNDTWSADHFRAGVFNIE
CCCCCEEEEEECCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCHHHCCCEEHH
ELNTDPFMEELVRQGLPYEVIER
HCCCCHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA