Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is plsY [H]

Identifier: 188528279

GI number: 188528279

Start: 1502270

End: 1503058

Strand: Direct

Name: plsY [H]

Synonym: HPSH_07745

Alternate gene names: 188528279

Gene position: 1502270-1503058 (Clockwise)

Preceding gene: 188528277

Following gene: 188528280

Centisome position: 93.39

GC content: 38.78

Gene sequence:

>789_bases
ATGGCTAGAAGATTCAAGCATTCTCAATATCCTAAAATTTTTAAGCCACTATACCCTAACAACTTAACGCTTTCACTTAA
AAAGCAACATGTTATAATGATCGCTATTTTATTTGAAAGGGTATTTATGGAAAGCGTTTTAAATTTCCTAACCAATATCA
ATGTGATTTTCACCCTTTTGGGCTATCTTATTGGAGGGATTCCTTTTGGCTATGCGTTAATGAAAATCTTTTACGGCATG
GATATTACTAAAATCGGATCGGGGGGCATTGGCGCAACGAATGTCTTACGCGCTTTACAAAGTAAGGGCGTGAGTAACGC
TAAACAAATGGCGCTATTAGTCTTAATCTTGGATCTTTTCAAAGGCATGTTTGCGGTGTTTTTAAGCAAATTGTTTGGGT
TGGATTATAGTTTGCAATGGATGGTCGCTATCGCTAGCATTTTAGGGCATTGCTATTCGCCTTTTTTGAATTTCAATGGA
GGTAAGGGCGTTTCTACGATCATGGGCTCTGTGGTGTTGCTCATCCCTATTGAAAGCCTGATTGGTTTAGTGGTGTGGTT
TTTTGTGGGCAAGGTGCTTAAAATCTCTTCACTCGCTAGCATTCTAGGGGTAGGCACAGCGACTGTTCTTATCTTTTTTG
TGCCTTATATGCATATCCCAGATAGCGTCAATATCCTTAAAGAAGTCGGCACGCAAACGCCTATGGTGCTTATTTTTATT
TTTACCCTTATCAAGCATGCGGGCAATATTTTTAATTTATTAGCCGGCAAGGAAAAGAAAATCTTATGA

Upstream 100 bases:

>100_bases
ACAAATGAGCCCCATCAATGCGAATGAAAGGCGTGATTAATAGCGCTAAAGAAATCAATAAAAACCCTATATAACGCTTC
AAACGAAACGATTTTAAAAA

Downstream 100 bases:

>100_bases
AAACCCAACAAGGCATTCATATCCATAACTTGGTGTTTGAAACGATTTTGGGGATTTTAGAATTTGAACGCTTAAAACCC
CAAAAAATAAGCGTGAATTT

Product: putative glycerol-3-phosphate acyltransferase PlsY

Products: NA

Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase [H]

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MARRFKHSQYPKIFKPLYPNNLTLSLKKQHVIMIAILFERVFMESVLNFLTNINVIFTLLGYLIGGIPFGYALMKIFYGM
DITKIGSGGIGATNVLRALQSKGVSNAKQMALLVLILDLFKGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNG
GKGVSTIMGSVVLLIPIESLIGLVVWFFVGKVLKISSLASILGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFI
FTLIKHAGNIFNLLAGKEKKIL

Sequences:

>Translated_262_residues
MARRFKHSQYPKIFKPLYPNNLTLSLKKQHVIMIAILFERVFMESVLNFLTNINVIFTLLGYLIGGIPFGYALMKIFYGM
DITKIGSGGIGATNVLRALQSKGVSNAKQMALLVLILDLFKGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNG
GKGVSTIMGSVVLLIPIESLIGLVVWFFVGKVLKISSLASILGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFI
FTLIKHAGNIFNLLAGKEKKIL
>Mature_261_residues
ARRFKHSQYPKIFKPLYPNNLTLSLKKQHVIMIAILFERVFMESVLNFLTNINVIFTLLGYLIGGIPFGYALMKIFYGMD
ITKIGSGGIGATNVLRALQSKGVSNAKQMALLVLILDLFKGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNGG
KGVSTIMGSVVLLIPIESLIGLVVWFFVGKVLKISSLASILGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFIF
TLIKHAGNIFNLLAGKEKKIL

Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP [H]

COG id: COG0344

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the plsY family [H]

Homologues:

Organism=Escherichia coli, GI1789439, Length=204, Percent_Identity=30.3921568627451, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003811 [H]

Pfam domain/function: PF02660 DUF205 [H]

EC number: NA

Molecular weight: Translated: 28917; Mature: 28785

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRFKHSQYPKIFKPLYPNNLTLSLKKQHVIMIAILFERVFMESVLNFLTNINVIFTLL
CCCCCCCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLIGGIPFGYALMKIFYGMDITKIGSGGIGATNVLRALQSKGVSNAKQMALLVLILDLF
HHHHHCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNGGKGVSTIMGSVVLLIPIESL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
IGLVVWFFVGKVLKISSLASILGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHH
FTLIKHAGNIFNLLAGKEKKIL
HHHHHHHCHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARRFKHSQYPKIFKPLYPNNLTLSLKKQHVIMIAILFERVFMESVLNFLTNINVIFTLL
CCCCCCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLIGGIPFGYALMKIFYGMDITKIGSGGIGATNVLRALQSKGVSNAKQMALLVLILDLF
HHHHHCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNGGKGVSTIMGSVVLLIPIESL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
IGLVVWFFVGKVLKISSLASILGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHH
FTLIKHAGNIFNLLAGKEKKIL
HHHHHHHCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA