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The map label for this gene is ybhS [C]

Identifier: 188528257

GI number: 188528257

Start: 1477770

End: 1478900

Strand: Reverse

Name: ybhS [C]

Synonym: HPSH_07615

Alternate gene names: 188528257

Gene position: 1478900-1477770 (Counterclockwise)

Preceding gene: 188528258

Following gene: 188528256

Centisome position: 91.94

GC content: 39.88

Gene sequence:

>1131_bases
ATGAATTTTTTTAAAATCCTTTTAATGGAATTAAGGGCTATTGCTTCTCATAAGGGCGTTTTGTTAATCCTTATAGGTGC
TCCTTTAATCTATGGCTTATTATACCCTTTGCCTTATTTAAAAGACATCGTAACGCAGCAAAAAATCGCCCTTGTAGATG
AAGACAATTCCTTTCTTTCTAGGCAATTAGCCTTCATGGCACAAAGCTCCAACGAGTTAGAAATCGCTTTTTTTAGCCCC
TCTATGCTGGAAGCCAAGAAGCTTTTAAAAGAAGAAAAAGTTTATGGGATCTTGCATATCCCTTCGCATTTTGAAGCCAA
TATCCATAAGCAAGTGCCTGTAACGATAGATTTTTATGCGAATTCCAATTACTTTTTGATTTATGGCGCCTTAGCGAATG
CGGTGGTGGAGAGCATCAACGCTTTAAATGATGAAATAAGGTTCAAACGCAACGCCCAAATAGAAGAAGCCGAATTAGGG
ACAGACGGGATTAAGATCAGGCCTATCGCTTTGTATAACCCTAGTGAGGGGTATTTGAATTACGCGCTCTCTAGCGTGTT
TATTTTCATTTTGCACCAGGTGATGCTCATTGCAAGCAGCATGTTTGTCAGCTCCAGGCGTTTGGAATTAGCCCTTTTAG
ACAAAAAGCAAATCGCTTTAAGGCAATTTGCAAGGCTTTTGATCTTTATGGGGGCGTTTAGCGTTTTTATTTTATGGTAT
TTTGGGGCGTTGTTTTCTTTTTATGGGATCGAACGGCATGCGAGCGCTTTAATGGTGTTTTTGAATAGCTCCATCTTCAT
GCTTGCAACCTTGAGTTTGGGGTCGTTTTTAGGCGCATGGATCAAAAATGAAGCCCACACCACTCAAATCGTTTTAATTT
CTTCTTTGCCCTTGATTTTTATGATGGGTTTTGTGTGGCCTTTTGAATCCTTGCCCTCTTATTTACAAGCGTTCGTCCAA
ATAGTGCCTGCTTATCATGCGATTAGTTTGCTAGGGCGGTTGAATCAAATGCGTGCGGAATTCATGGATGTTTCCATCCA
TTTTTACGCGCTTATTGCGATTTTTATTGCGAGTTTTATAGGGAGTGTGTTCAAACTCAGCTCTTTAAAGAAAGCTTGTG
AAAACGCTTAA

Upstream 100 bases:

>100_bases
AGTCTTTAAATTCTCTAATGCCGCTTGCGTTCTTTTTAATCTTTTTAGCTTTAGGGCTTTTGATTTTTTATTTTTCTTTT
AAAAAAGGCAAGGCTAGCGC

Downstream 100 bases:

>100_bases
AAACCTCATCGCTTCCAAGCATCAGACTAAAGCGTCTCGTTTTTTAGGGTATCTTATGCCTTTTTATGATTTTGAAAAAA
CCCTTTTACAATTGAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC Transporter Permease; Conserved Transporter; ABC-2 Type Transport System Permease Protein; ABC-Type Multidrug Transport System Protein; Transport-Related Membrane Protein; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease; ABC-2 Type Transporter Domain Protein; Multidrug ABC Transporter Permease Protein; ABC-2 Type Transporter Family; ABC Transporter Transmembrane Protein; Integral Membrane Protein; Multidrug ABC Transporter Permease Component; Abc-2 Type Transporter; Permease Component Of ABC Transporter; Antibiotic Transport System Permease Protein

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MNFFKILLMELRAIASHKGVLLILIGAPLIYGLLYPLPYLKDIVTQQKIALVDEDNSFLSRQLAFMAQSSNELEIAFFSP
SMLEAKKLLKEEKVYGILHIPSHFEANIHKQVPVTIDFYANSNYFLIYGALANAVVESINALNDEIRFKRNAQIEEAELG
TDGIKIRPIALYNPSEGYLNYALSSVFIFILHQVMLIASSMFVSSRRLELALLDKKQIALRQFARLLIFMGAFSVFILWY
FGALFSFYGIERHASALMVFLNSSIFMLATLSLGSFLGAWIKNEAHTTQIVLISSLPLIFMMGFVWPFESLPSYLQAFVQ
IVPAYHAISLLGRLNQMRAEFMDVSIHFYALIAIFIASFIGSVFKLSSLKKACENA

Sequences:

>Translated_376_residues
MNFFKILLMELRAIASHKGVLLILIGAPLIYGLLYPLPYLKDIVTQQKIALVDEDNSFLSRQLAFMAQSSNELEIAFFSP
SMLEAKKLLKEEKVYGILHIPSHFEANIHKQVPVTIDFYANSNYFLIYGALANAVVESINALNDEIRFKRNAQIEEAELG
TDGIKIRPIALYNPSEGYLNYALSSVFIFILHQVMLIASSMFVSSRRLELALLDKKQIALRQFARLLIFMGAFSVFILWY
FGALFSFYGIERHASALMVFLNSSIFMLATLSLGSFLGAWIKNEAHTTQIVLISSLPLIFMMGFVWPFESLPSYLQAFVQ
IVPAYHAISLLGRLNQMRAEFMDVSIHFYALIAIFIASFIGSVFKLSSLKKACENA
>Mature_376_residues
MNFFKILLMELRAIASHKGVLLILIGAPLIYGLLYPLPYLKDIVTQQKIALVDEDNSFLSRQLAFMAQSSNELEIAFFSP
SMLEAKKLLKEEKVYGILHIPSHFEANIHKQVPVTIDFYANSNYFLIYGALANAVVESINALNDEIRFKRNAQIEEAELG
TDGIKIRPIALYNPSEGYLNYALSSVFIFILHQVMLIASSMFVSSRRLELALLDKKQIALRQFARLLIFMGAFSVFILWY
FGALFSFYGIERHASALMVFLNSSIFMLATLSLGSFLGAWIKNEAHTTQIVLISSLPLIFMMGFVWPFESLPSYLQAFVQ
IVPAYHAISLLGRLNQMRAEFMDVSIHFYALIAIFIASFIGSVFKLSSLKKACENA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42466; Mature: 42466

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFKILLMELRAIASHKGVLLILIGAPLIYGLLYPLPYLKDIVTQQKIALVDEDNSFLS
CHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCHHHHHHHHHHHHEEEEECCHHHHH
RQLAFMAQSSNELEIAFFSPSMLEAKKLLKEEKVYGILHIPSHFEANIHKQVPVTIDFYA
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEE
NSNYFLIYGALANAVVESINALNDEIRFKRNAQIEEAELGTDGIKIRPIALYNPSEGYLN
CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEEEECCCCHHHH
YALSSVFIFILHQVMLIASSMFVSSRRLELALLDKKQIALRQFARLLIFMGAFSVFILWY
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
FGALFSFYGIERHASALMVFLNSSIFMLATLSLGSFLGAWIKNEAHTTQIVLISSLPLIF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH
MMGFVWPFESLPSYLQAFVQIVPAYHAISLLGRLNQMRAEFMDVSIHFYALIAIFIASFI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSVFKLSSLKKACENA
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFFKILLMELRAIASHKGVLLILIGAPLIYGLLYPLPYLKDIVTQQKIALVDEDNSFLS
CHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCHHHHHHHHHHHHEEEEECCHHHHH
RQLAFMAQSSNELEIAFFSPSMLEAKKLLKEEKVYGILHIPSHFEANIHKQVPVTIDFYA
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEE
NSNYFLIYGALANAVVESINALNDEIRFKRNAQIEEAELGTDGIKIRPIALYNPSEGYLN
CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEEEECCCCHHHH
YALSSVFIFILHQVMLIASSMFVSSRRLELALLDKKQIALRQFARLLIFMGAFSVFILWY
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
FGALFSFYGIERHASALMVFLNSSIFMLATLSLGSFLGAWIKNEAHTTQIVLISSLPLIF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH
MMGFVWPFESLPSYLQAFVQIVPAYHAISLLGRLNQMRAEFMDVSIHFYALIAIFIASFI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSVFKLSSLKKACENA
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA