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The map label for this gene is 188528258

Identifier: 188528258

GI number: 188528258

Start: 1478897

End: 1479985

Strand: Reverse

Name: 188528258

Synonym: HPSH_07620

Alternate gene names: NA

Gene position: 1479985-1478897 (Counterclockwise)

Preceding gene: 188528259

Following gene: 188528257

Centisome position: 92.01

GC content: 40.4

Gene sequence:

>1089_bases
TTGATAAGCGCATGGGTTTTACAAGACAAGTTCTTGTTTATCGTGTGTTTTATATTGCCTTTTTGTTTAGGGGTTTTAGG
CACGCAAATCTTTAAGCAAGAAATCCCAAGACAGCTCCCTATCGTGGTGGTGGATTGGGATAAGACCACTACAAGCCATC
AGGTAGCGTTTGAATTAGGCGCAACGAGCGCGCTTGAAATCAAATACCAAGTGGCTAGCCTTTTAGAAGCCAAACGCTTT
TTAAACTCCGCTGAAGTGTATGGGGCGTTAGTTTTGCCTAAAGATTTAGAGAAAAAAATCAAAATGGGGCGAAAGGTGGA
TTTGCCCTTTTATTATAACGCGGAATATGTTTTAGTGGGGAAAACGCTCAAAAACGCTTTTTTACAAACCGCTTTGACTT
TAGACGCTAAAACCTTAGCCACCAAAGCTTTAGTGCGAGATTCCAATTTGATTTCTGCTAAAGCCCAAGCGGTGCCTATT
GTCTTGCAATTGCATGCGCTATACAATGAAGAAAACAATTACACGCAATACCTTTTAAGCGTGATGCTGCCTTGCATGTG
GCTTATTTTGATTGCGATTGGCATGCTCAATTTCATTCAAAAAGTCTCTAACATGCGCGAGCTTTTAATCAGTATTTTAG
CGAATGTGTGTGTGTTTAGTTTTTGGGGGATGGGCATGGCGTTTTATTTTAATTGCATTGGCATGGAGGGGCATTATGCG
CATTTGTTGTTGGTCTTTTTGGCGGTAGTTTTGATGGTGCTCATTATGAGCGGGTTTGTGGTGTTGGTTTATGGCGTTTC
AAAAAGTGCTATTGAAACCGCTGGCGCAATTGGGGTCTATACCGCTCCAAGCTTTGCGTTTGCTGGGGTTACTTACCCGC
AAAACAACATGGAAATTTTTGGGAGTTTTTGGAGTCATTGCTTGCCTATTAGCCATTTTATGAAGTTCTTTTTACAAGAG
GCCTATTATAAGACGGATTTTACAGAGTCTTTAAATTCTCTAATGCCGCTTGCGTTCTTTTTAATCTTTTTAGCTTTAGG
GCTTTTGATTTTTTATTTTTCTTTTAAAAAAGGCAAGGCTAGCGCATGA

Upstream 100 bases:

>100_bases
ATGAAGTGGAGGCCATACCCTTAGAAAAGCTGGAAAATTTTAGGGTAGGGATGAGCGTGTTAGTTACCATTAAGCCTTAG
AAAGGATTGTTTTGTTCAGA

Downstream 100 bases:

>100_bases
ATTTTTTTAAAATCCTTTTAATGGAATTAAGGGCTATTGCTTCTCATAAGGGCGTTTTGTTAATCCTTATAGGTGCTCCT
TTAATCTATGGCTTATTATA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transport System Permease Protein; Permease Component Of ABC Transporter; ABC-2 Type Transport System Permease; Daunorubicin Resistance Transmembrane Protein; ABC Transporter Permease; ABC Transporter Transmembrane Protein; ABC-Type Multidrug Transporter Permease Component; ABC Transporter Transmembrane Permease; Multidrug ABC Transporter Permease Component; ABC-Type Multidrug Transport System

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MISAWVLQDKFLFIVCFILPFCLGVLGTQIFKQEIPRQLPIVVVDWDKTTTSHQVAFELGATSALEIKYQVASLLEAKRF
LNSAEVYGALVLPKDLEKKIKMGRKVDLPFYYNAEYVLVGKTLKNAFLQTALTLDAKTLATKALVRDSNLISAKAQAVPI
VLQLHALYNEENNYTQYLLSVMLPCMWLILIAIGMLNFIQKVSNMRELLISILANVCVFSFWGMGMAFYFNCIGMEGHYA
HLLLVFLAVVLMVLIMSGFVVLVYGVSKSAIETAGAIGVYTAPSFAFAGVTYPQNNMEIFGSFWSHCLPISHFMKFFLQE
AYYKTDFTESLNSLMPLAFFLIFLALGLLIFYFSFKKGKASA

Sequences:

>Translated_362_residues
MISAWVLQDKFLFIVCFILPFCLGVLGTQIFKQEIPRQLPIVVVDWDKTTTSHQVAFELGATSALEIKYQVASLLEAKRF
LNSAEVYGALVLPKDLEKKIKMGRKVDLPFYYNAEYVLVGKTLKNAFLQTALTLDAKTLATKALVRDSNLISAKAQAVPI
VLQLHALYNEENNYTQYLLSVMLPCMWLILIAIGMLNFIQKVSNMRELLISILANVCVFSFWGMGMAFYFNCIGMEGHYA
HLLLVFLAVVLMVLIMSGFVVLVYGVSKSAIETAGAIGVYTAPSFAFAGVTYPQNNMEIFGSFWSHCLPISHFMKFFLQE
AYYKTDFTESLNSLMPLAFFLIFLALGLLIFYFSFKKGKASA
>Mature_362_residues
MISAWVLQDKFLFIVCFILPFCLGVLGTQIFKQEIPRQLPIVVVDWDKTTTSHQVAFELGATSALEIKYQVASLLEAKRF
LNSAEVYGALVLPKDLEKKIKMGRKVDLPFYYNAEYVLVGKTLKNAFLQTALTLDAKTLATKALVRDSNLISAKAQAVPI
VLQLHALYNEENNYTQYLLSVMLPCMWLILIAIGMLNFIQKVSNMRELLISILANVCVFSFWGMGMAFYFNCIGMEGHYA
HLLLVFLAVVLMVLIMSGFVVLVYGVSKSAIETAGAIGVYTAPSFAFAGVTYPQNNMEIFGSFWSHCLPISHFMKFFLQE
AYYKTDFTESLNSLMPLAFFLIFLALGLLIFYFSFKKGKASA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40652; Mature: 40652

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISAWVLQDKFLFIVCFILPFCLGVLGTQIFKQEIPRQLPIVVVDWDKTTTSHQVAFELG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHEEEEC
ATSALEIKYQVASLLEAKRFLNSAEVYGALVLPKDLEKKIKMGRKVDLPFYYNAEYVLVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCEECCCEEECCCEEEEC
KTLKNAFLQTALTLDAKTLATKALVRDSNLISAKAQAVPIVLQLHALYNEENNYTQYLLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VMLPCMWLILIAIGMLNFIQKVSNMRELLISILANVCVFSFWGMGMAFYFNCIGMEGHYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
HLLLVFLAVVLMVLIMSGFVVLVYGVSKSAIETAGAIGVYTAPSFAFAGVTYPQNNMEIF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCHHCCCCCCCCCCHHHH
GSFWSHCLPISHFMKFFLQEAYYKTDFTESLNSLMPLAFFLIFLALGLLIFYFSFKKGKA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SA
CC
>Mature Secondary Structure
MISAWVLQDKFLFIVCFILPFCLGVLGTQIFKQEIPRQLPIVVVDWDKTTTSHQVAFELG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHEEEEC
ATSALEIKYQVASLLEAKRFLNSAEVYGALVLPKDLEKKIKMGRKVDLPFYYNAEYVLVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCEECCCEEECCCEEEEC
KTLKNAFLQTALTLDAKTLATKALVRDSNLISAKAQAVPIVLQLHALYNEENNYTQYLLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VMLPCMWLILIAIGMLNFIQKVSNMRELLISILANVCVFSFWGMGMAFYFNCIGMEGHYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
HLLLVFLAVVLMVLIMSGFVVLVYGVSKSAIETAGAIGVYTAPSFAFAGVTYPQNNMEIF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCHHCCCCCCCCCCHHHH
GSFWSHCLPISHFMKFFLQEAYYKTDFTESLNSLMPLAFFLIFLALGLLIFYFSFKKGKA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA