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The map label for this gene is ubiX [C]

Identifier: 188528246

GI number: 188528246

Start: 1467870

End: 1468433

Strand: Reverse

Name: ubiX [C]

Synonym: HPSH_07560

Alternate gene names: 188528246

Gene position: 1468433-1467870 (Counterclockwise)

Preceding gene: 188528248

Following gene: 188528245

Centisome position: 91.29

GC content: 45.74

Gene sequence:

>564_bases
ATGAAATTAGTTTTAGGCATCAGTGGGGCGAGCGGGATACCCCTAGCCTTGCGGTTTTTAGAAAAATTACCCAAAGAAAT
TGAAGTTTTTGTCGTGGCGTCTAAAAACGCGCATGTCGTGGCGTTAGAAGAATCTAACATCAACCTTAAAAACGCCATGA
AAGATTTACGGCCTAGCGCTACTTTTTTTAACGAGCAAGACATCCATGCGAGCATCGCCTCAGGGAGTTATGGTATCCAT
AAAATGGCGATCATTCCAGCGAGTATGGACATGGTGGCTAAAATCGCGCATGGCTTTGGGGGGGATTTGATCTCTAGGAG
CGCGTCTGTGATGCTTAAAGAAAAGCGCCCCTTACTCATTGCCCCTAGAGAAATGCCCCTAAGCGCTATCATGCTGGAAA
ATTTGCTCAAACTCGCCCGCTCTAATGCAATCATTGCGCCGCCGATGATGACTTATTACACCCAGAGCAAGACTTTAGAA
GCGATGCAAGATTTTTTAGTGGGGAAGTGGTTTGACAGCTTAGGGATAGAAAATGACTTATACCCACGATGGGGAATGAA
CTGA

Upstream 100 bases:

>100_bases
GCTCAATCAAATCATTCAAGCGAAAAATTTAGAAAGCAATAAAATACTGAAAGCAAAAGTGTTGAGCAGCTCTAAAGCGC
AAATCTTATAAAGGACATTC

Downstream 100 bases:

>100_bases
TGCAAAAAATCGGCATTTACCCGGGCACTTTTGATCCGGTCACTAACGGGCATATAGACATCATCCACCGATCTAGCGAA
TTGTTTGAAAAGCTCATTGT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKLVLGISGASGIPLALRFLEKLPKEIEVFVVASKNAHVVALEESNINLKNAMKDLRPSATFFNEQDIHASIASGSYGIH
KMAIIPASMDMVAKIAHGFGGDLISRSASVMLKEKRPLLIAPREMPLSAIMLENLLKLARSNAIIAPPMMTYYTQSKTLE
AMQDFLVGKWFDSLGIENDLYPRWGMN

Sequences:

>Translated_187_residues
MKLVLGISGASGIPLALRFLEKLPKEIEVFVVASKNAHVVALEESNINLKNAMKDLRPSATFFNEQDIHASIASGSYGIH
KMAIIPASMDMVAKIAHGFGGDLISRSASVMLKEKRPLLIAPREMPLSAIMLENLLKLARSNAIIAPPMMTYYTQSKTLE
AMQDFLVGKWFDSLGIENDLYPRWGMN
>Mature_187_residues
MKLVLGISGASGIPLALRFLEKLPKEIEVFVVASKNAHVVALEESNINLKNAMKDLRPSATFFNEQDIHASIASGSYGIH
KMAIIPASMDMVAKIAHGFGGDLISRSASVMLKEKRPLLIAPREMPLSAIMLENLLKLARSNAIIAPPMMTYYTQSKTLE
AMQDFLVGKWFDSLGIENDLYPRWGMN

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=189, Percent_Identity=33.8624338624339, Blast_Score=104, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6320746, Length=185, Percent_Identity=38.3783783783784, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 20604; Mature: 20604

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVLGISGASGIPLALRFLEKLPKEIEVFVVASKNAHVVALEESNINLKNAMKDLRPSA
CEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCC
TFFNEQDIHASIASGSYGIHKMAIIPASMDMVAKIAHGFGGDLISRSASVMLKEKRPLLI
CCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHEEEECCCCEEE
APREMPLSAIMLENLLKLARSNAIIAPPMMTYYTQSKTLEAMQDFLVGKWFDSLGIENDL
ECCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YPRWGMN
CCCCCCC
>Mature Secondary Structure
MKLVLGISGASGIPLALRFLEKLPKEIEVFVVASKNAHVVALEESNINLKNAMKDLRPSA
CEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCC
TFFNEQDIHASIASGSYGIHKMAIIPASMDMVAKIAHGFGGDLISRSASVMLKEKRPLLI
CCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHEEEECCCCEEE
APREMPLSAIMLENLLKLARSNAIIAPPMMTYYTQSKTLEAMQDFLVGKWFDSLGIENDL
ECCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YPRWGMN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]