| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is coaD
Identifier: 188528245
GI number: 188528245
Start: 1467397
End: 1467870
Strand: Reverse
Name: coaD
Synonym: HPSH_07555
Alternate gene names: 188528245
Gene position: 1467870-1467397 (Counterclockwise)
Preceding gene: 188528246
Following gene: 188528244
Centisome position: 91.25
GC content: 40.93
Gene sequence:
>474_bases ATGCAAAAAATCGGCATTTACCCGGGCACTTTTGATCCGGTCACTAACGGGCATATAGACATCATCCACCGATCTAGCGA ATTGTTTGAAAAGCTCATTGTCGCTGTGGCGTATTCTTGCGCTAAAAACCCCATGTTTAGTTTGAAAGAGCGCTTAGAAA TGATACAGCTTGCCACTAAAGGTTTTAAAAATGTAGAATGCGTGGCGTTTGAAGGGCTATTAGCCAATCTGGCTAAAGAA TATCATTGTAAGGTGCTAGTTAGGGGATTAAGGGTGGTGAGCGATTTTGAATACGAATTGCAAATGGGCTATGCGAACAA ATCCTTAAACCACGAATTAGAAACCTTGTATTTCATGCCCACTTTACAAAACGCTTTCATAAGCTCTTCTATCGTGCGAT CCATTATCGCGCATAAGGGCGATGCGAGTCATTTAGTGCCTAAAGAAATTCACCCTTTTATTTCAAAGGTTTAA
Upstream 100 bases:
>100_bases AGAGCAAGACTTTAGAAGCGATGCAAGATTTTTTAGTGGGGAAGTGGTTTGACAGCTTAGGGATAGAAAATGACTTATAC CCACGATGGGGAATGAACTG
Downstream 100 bases:
>100_bases AATGTATGTGGTGTTAGAAGGCGTTGATGGCGCGGGCAAAAGCACTCAAGTAGGATTATTAAAAGACAGGTTTAAAAACG CCCTTGTTACCAAAGAGCCA
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAYSCAKNPMFSLKERLEMIQLATKGFKNVECVAFEGLLANLAKE YHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIHPFISKV
Sequences:
>Translated_157_residues MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAYSCAKNPMFSLKERLEMIQLATKGFKNVECVAFEGLLANLAKE YHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIHPFISKV >Mature_157_residues MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAYSCAKNPMFSLKERLEMIQLATKGFKNVECVAFEGLLANLAKE YHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIHPFISKV
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family [H]
Homologues:
Organism=Escherichia coli, GI1790065, Length=151, Percent_Identity=50.3311258278146, Blast_Score=180, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.3 [H]
Molecular weight: Translated: 17730; Mature: 17730
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAYSCAKNPMFSLKERLEMIQLATK CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC GFKNVECVAFEGLLANLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCHHHHHEECH TLQNAFISSSIVRSIIAHKGDASHLVPKEIHPFISKV HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAYSCAKNPMFSLKERLEMIQLATK CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC GFKNVECVAFEGLLANLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCHHHHHEECH TLQNAFISSSIVRSIIAHKGDASHLVPKEIHPFISKV HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA