Click here to switch to the map view.

The map label for this gene is 188528241

Identifier: 188528241

GI number: 188528241

Start: 1459354

End: 1460100

Strand: Reverse

Name: 188528241

Synonym: HPSH_07525

Alternate gene names: NA

Gene position: 1460100-1459354 (Counterclockwise)

Preceding gene: 188528242

Following gene: 188528240

Centisome position: 90.77

GC content: 42.84

Gene sequence:

>747_bases
ATGTTGAAAAGAATTATATTGTTAGGGGCTTTGGGTGTTGGAGCGAGCGCTGAAGAGAGCGCGGCTTTTGTGGGAGTCAA
TTACCAGGTGAGCATGATACAAAATCAGACTAAAATGGTGAATGACAACGGCTTGCAAAAGCCTTTGATAAAGTTCCCGC
CTTATGCAGGAGCGGGTTTTGAAGTGGGCTATAAGCAATTTTTTGGTAAGAAAAAATGGTTTGGCATGCGTTATTATGGG
TTTTTTGACTACGCGCACAACCGCTTTGGTGTGATGAAAAAGGGTATTCCGGTGGGCGATAGCGGGTTTATTTACAATAG
TTTCAGTTTTGGAGGGAATACTTTAACGGAGAGGGATTCCTATCAGGGGCAATACTATATCAATTTATTCACTTATGGTG
TAGGGTTGGATACGCTGTGGAATTTTGTGAATAAAGAAAACATGGTTTTTGGTTTCGTCGTAGGGATCCAATTGGCCGGG
GATAGTTGGGCAACGAGCATCAGTAAAGAGATCGCTAATTATGCAAAACACCACAGCAATTCTAGTTATAGCCCGGCTAA
TTTCCAGTTTCTATGGAAGTTTGGGGTCCGCACCCATATCGCTAAACACAACAGCTTGGAATTAGGGATTAAAGTGCCTA
CGATCACGCACCGGCTTTTCTCCATTACCAACGAAAAGGGATACACCTTACAGGCTGATGTGCGTAGAGTCTATGCGTTT
CAAATCAGTTACTTGAGGGATTTTTAA

Upstream 100 bases:

>100_bases
TTAAGAAAAAATATATTATTATTTCTTTATAAGTAATACTTAGCCATTTTAAGCTAATTATTATATAAAGTGATTATCAA
AAATAAAGGGAAAAGACTGG

Downstream 100 bases:

>100_bases
CCCCTTTTTGGATACAATCACGCCTAAAACTATCCATTTAAAGGTGTGAAATGGCAAATTTAGAAAATTTAGACTGGAAA
AATCTAGGCTTTAGTTACAT

Product: outer membrane protein (omp31)

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopE; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HorL; Outer Membrane Protein HorB; Outer Membrane Protein HopG; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein,HopV SabB SabA; Outer Membrane Protein HopD; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopF

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLKRIILLGALGVGASAEESAAFVGVNYQVSMIQNQTKMVNDNGLQKPLIKFPPYAGAGFEVGYKQFFGKKKWFGMRYYG
FFDYAHNRFGVMKKGIPVGDSGFIYNSFSFGGNTLTERDSYQGQYYINLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAG
DSWATSISKEIANYAKHHSNSSYSPANFQFLWKFGVRTHIAKHNSLELGIKVPTITHRLFSITNEKGYTLQADVRRVYAF
QISYLRDF

Sequences:

>Translated_248_residues
MLKRIILLGALGVGASAEESAAFVGVNYQVSMIQNQTKMVNDNGLQKPLIKFPPYAGAGFEVGYKQFFGKKKWFGMRYYG
FFDYAHNRFGVMKKGIPVGDSGFIYNSFSFGGNTLTERDSYQGQYYINLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAG
DSWATSISKEIANYAKHHSNSSYSPANFQFLWKFGVRTHIAKHNSLELGIKVPTITHRLFSITNEKGYTLQADVRRVYAF
QISYLRDF
>Mature_248_residues
MLKRIILLGALGVGASAEESAAFVGVNYQVSMIQNQTKMVNDNGLQKPLIKFPPYAGAGFEVGYKQFFGKKKWFGMRYYG
FFDYAHNRFGVMKKGIPVGDSGFIYNSFSFGGNTLTERDSYQGQYYINLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAG
DSWATSISKEIANYAKHHSNSSYSPANFQFLWKFGVRTHIAKHNSLELGIKVPTITHRLFSITNEKGYTLQADVRRVYAF
QISYLRDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28097; Mature: 28097

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRIILLGALGVGASAEESAAFVGVNYQVSMIQNQTKMVNDNGLQKPLIKFPPYAGAGF
CCCEEEEEEECCCCCCCCCCEEEEECCEEEEEECCCHHEECCCCCCCCHHCCCCCCCCCC
EVGYKQFFGKKKWFGMRYYGFFDYAHNRFGVMKKGIPVGDSGFIYNSFSFGGNTLTERDS
CCCHHHHCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCC
YQGQYYINLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAGDSWATSISKEIANYAKHHSN
CCCEEEEEEEEECCCHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCC
SSYSPANFQFLWKFGVRTHIAKHNSLELGIKVPTITHRLFSITNEKGYTLQADVRRVYAF
CCCCCCCEEEEEEECCHHHHCCCCCEEEEEECCHHHHHHHEEECCCCCEEHHHHHHHHHH
QISYLRDF
HHHHHHCC
>Mature Secondary Structure
MLKRIILLGALGVGASAEESAAFVGVNYQVSMIQNQTKMVNDNGLQKPLIKFPPYAGAGF
CCCEEEEEEECCCCCCCCCCEEEEECCEEEEEECCCHHEECCCCCCCCHHCCCCCCCCCC
EVGYKQFFGKKKWFGMRYYGFFDYAHNRFGVMKKGIPVGDSGFIYNSFSFGGNTLTERDS
CCCHHHHCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCC
YQGQYYINLFTYGVGLDTLWNFVNKENMVFGFVVGIQLAGDSWATSISKEIANYAKHHSN
CCCEEEEEEEEECCCHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCC
SSYSPANFQFLWKFGVRTHIAKHNSLELGIKVPTITHRLFSITNEKGYTLQADVRRVYAF
CCCCCCCEEEEEEECCHHHHCCCCCEEEEEECCHHHHHHHEEECCCCCEEHHHHHHHHHH
QISYLRDF
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA