| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is ilvE [H]
Identifier: 188528240
GI number: 188528240
Start: 1458281
End: 1459303
Strand: Reverse
Name: ilvE [H]
Synonym: HPSH_07520
Alternate gene names: 188528240
Gene position: 1459303-1458281 (Counterclockwise)
Preceding gene: 188528241
Following gene: 188528238
Centisome position: 90.72
GC content: 46.04
Gene sequence:
>1023_bases ATGGCAAATTTAGAAAATTTAGACTGGAAAAATCTAGGCTTTAGTTACATTAAAACGGATTTTCGCTTCATCGCTAGTTA TAAAAACGGCTCTTGGTCGCAAGGCGAATTGGTTAGCGAAAATGCGTTACAAATCAGCGAAGGCTCGCCGGTCTTGCACT ACGGGCAGGCTTGTTTTGAAGGCTTGAAGGCTTACCGCTCTCAAAAGGGGAAGGCTCTACTGTTTCGCCCTTTAGAAAAC GCCAAACGCTTGCAAACTTCATGCGAAAGACTGCTCATGCCCAAAGTGAGCGAAGAGCTGTTTTTAAGGGCATGCGCTGA AGTGGTGAAAGCGAATCAAAAATGGCTCGCTCCTTATAAAAGTGGGGCGAGTTTGTATTTGCGCCCTTTTGTCATAGGCG TGGGGGATAATTTGGGGGTGAAGCCGGCCAGCGAATACCTTTTTATCGTGTTTTGCGCGCCTGTGGGGGCGTATTTTAAG GGGGGCATAGAAAAAGGAGGGGCTAGGTTTATCACTACGGCGTTTGATAGGGCCGCGCCTAAAGGCACCGGTGGGGTGAA AGTGGGGGGGAATTATGCTGCAAGCCTGTTAGCCCACAAAATAGCCACAGAGCAAGGCTATGATGATTGCATTTATTTAG ACCCTGCCACGCACACTAAAATTGAAGAAGTGGGGGCGGCGAATTTTTTTGGTATCACGCATGATAACGCCTTTATCACC CCGCATTCGCCAAGCATTCTGCCAAGCATTACAAAAAAAAGCTTGATGGTTTTGGCTAAAGAATATTTGAACCTCAAAGT AGAAGAGAGGGAAATCCTAATGGATGAGTTGGGCACGTTTAAGGAAGCTGGAGCGTGCGGGACAGCTGCGATCATTACGC CCATTAAAGAAATCGCGCATAATGACAAGTCTTATTTTTTTGAAGCACCGGGCAACACCACTAAACAACTCTATGATTTG CTTTTATCCATCCAACAAGGCGAACAAGAAGCCCCTAAAGATTGGATTTTTGAAGTTTGCTAA
Upstream 100 bases:
>100_bases ATGTGCGTAGAGTCTATGCGTTTCAAATCAGTTACTTGAGGGATTTTTAACCCCTTTTTGGATACAATCACGCCTAAAAC TATCCATTTAAAGGTGTGAA
Downstream 100 bases:
>100_bases AAGGTTAAAATTTATAGCTGTATGCCGCATAAAATAAGGGTGAAGTCTCAAAGCGTTTGGAGCTAGAAAGCAATCTGGCG GTGGGTAAGATTTTAAACCC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MANLENLDWKNLGFSYIKTDFRFIASYKNGSWSQGELVSENALQISEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLEN AKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPASEYLFIVFCAPVGAYFK GGIEKGGARFITTAFDRAAPKGTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPATHTKIEEVGAANFFGITHDNAFIT PHSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELGTFKEAGACGTAAIITPIKEIAHNDKSYFFEAPGNTTKQLYDL LLSIQQGEQEAPKDWIFEVC
Sequences:
>Translated_340_residues MANLENLDWKNLGFSYIKTDFRFIASYKNGSWSQGELVSENALQISEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLEN AKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPASEYLFIVFCAPVGAYFK GGIEKGGARFITTAFDRAAPKGTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPATHTKIEEVGAANFFGITHDNAFIT PHSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELGTFKEAGACGTAAIITPIKEIAHNDKSYFFEAPGNTTKQLYDL LLSIQQGEQEAPKDWIFEVC >Mature_339_residues ANLENLDWKNLGFSYIKTDFRFIASYKNGSWSQGELVSENALQISEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENA KRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPASEYLFIVFCAPVGAYFKG GIEKGGARFITTAFDRAAPKGTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPATHTKIEEVGAANFFGITHDNAFITP HSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELGTFKEAGACGTAAIITPIKEIAHNDKSYFFEAPGNTTKQLYDLL LSIQQGEQEAPKDWIFEVC
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010906, Length=346, Percent_Identity=32.6589595375723, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI296010904, Length=346, Percent_Identity=32.6589595375723, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI38176287, Length=346, Percent_Identity=32.6589595375723, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI50658084, Length=345, Percent_Identity=30.1449275362319, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI258614015, Length=298, Percent_Identity=31.2080536912752, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI296010902, Length=346, Percent_Identity=28.3236994219653, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI296010900, Length=346, Percent_Identity=28.3236994219653, Blast_Score=125, Evalue=6e-29, Organism=Escherichia coli, GI48994963, Length=315, Percent_Identity=32.3809523809524, Blast_Score=128, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17568601, Length=314, Percent_Identity=31.8471337579618, Blast_Score=149, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17565728, Length=284, Percent_Identity=30.9859154929577, Blast_Score=114, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6322002, Length=318, Percent_Identity=32.3899371069182, Blast_Score=149, Evalue=8e-37, Organism=Saccharomyces cerevisiae, GI6322608, Length=334, Percent_Identity=32.3353293413174, Blast_Score=147, Evalue=2e-36, Organism=Drosophila melanogaster, GI24641779, Length=339, Percent_Identity=29.2035398230088, Blast_Score=153, Evalue=2e-37,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 37449; Mature: 37318
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLENLDWKNLGFSYIKTDFRFIASYKNGSWSQGELVSENALQISEGSPVLHYGQACFE CCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCEECCCCEEECCCCCHHHHHHHHHH GLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYK HHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC SGASLYLRPFVIGVGDNLGVKPASEYLFIVFCAPVGAYFKGGIEKGGARFITTAFDRAAP CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHHHHCCCCCCCCEEEEHHHHHCCC KGTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPATHTKIEEVGAANFFGITHDNAFIT CCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCCEEEEECCCEEEC PHSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELGTFKEAGACGTAAIITPIKEIAH CCCCCCCHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHC NDKSYFFEAPGNTTKQLYDLLLSIQQGEQEAPKDWIFEVC CCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCC >Mature Secondary Structure ANLENLDWKNLGFSYIKTDFRFIASYKNGSWSQGELVSENALQISEGSPVLHYGQACFE CCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCEECCCCEEECCCCCHHHHHHHHHH GLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYK HHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC SGASLYLRPFVIGVGDNLGVKPASEYLFIVFCAPVGAYFKGGIEKGGARFITTAFDRAAP CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHHHHCCCCCCCCEEEEHHHHHCCC KGTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPATHTKIEEVGAANFFGITHDNAFIT CCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCCEEEEECCCEEEC PHSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELGTFKEAGACGTAAIITPIKEIAH CCCCCCCHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHC NDKSYFFEAPGNTTKQLYDLLLSIQQGEQEAPKDWIFEVC CCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]