Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528202

Identifier: 188528202

GI number: 188528202

Start: 1428032

End: 1428319

Strand: Direct

Name: 188528202

Synonym: HPSH_07330

Alternate gene names: NA

Gene position: 1428032-1428319 (Clockwise)

Preceding gene: 188528201

Following gene: 188528203

Centisome position: 88.78

GC content: 41.32

Gene sequence:

>288_bases
ATGCTTTTTAAAACTTATCAAAAATTATTGGGTGCGAGCTGTTTAGCGTTGTATCTGGTGGGCTGTGGGAGTGGCGGTGG
CGGTGAATCGCCGGTTGAAATGACTGCAAATAGTAAGGGTGAGTTTCAAATCAGCTCCAAAGCAGATAGCGTTACTATTC
AAGGCGTGAAGCTCAATAGAGGTAATTGTGTTGTCAGTTTTTCTCAAATATATGCTCGATCAATTTCTGCACAAGACTTT
AAAGATGAAGCACACGCATACGAGAAAGTTAGCAGACATGCAGAATAA

Upstream 100 bases:

>100_bases
AGAGCTTTCAAATTAGTTATGATATATCGCCATTTTTAAAAAGTCTAAAGACTATAACCCTTAGCGAACTATCACACATA
ATCAATTCATAGGAACAAGC

Downstream 100 bases:

>100_bases
AATTTCTCAATTAGAGCAAAAGGGTGTGATGATGGAGTCTCAAACCCTTAAATTTGGAGAAAGTTTAAACGGCTATTCTA
GAGGGTGCGATATTATAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MLFKTYQKLLGASCLALYLVGCGSGGGGESPVEMTANSKGEFQISSKADSVTIQGVKLNRGNCVVSFSQIYARSISAQDF
KDEAHAYEKVSRHAE

Sequences:

>Translated_95_residues
MLFKTYQKLLGASCLALYLVGCGSGGGGESPVEMTANSKGEFQISSKADSVTIQGVKLNRGNCVVSFSQIYARSISAQDF
KDEAHAYEKVSRHAE
>Mature_95_residues
MLFKTYQKLLGASCLALYLVGCGSGGGGESPVEMTANSKGEFQISSKADSVTIQGVKLNRGNCVVSFSQIYARSISAQDF
KDEAHAYEKVSRHAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10169; Mature: 10169

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKTYQKLLGASCLALYLVGCGSGGGGESPVEMTANSKGEFQISSKADSVTIQGVKLNR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEECCCCCEEEEEEEEECC
GNCVVSFSQIYARSISAQDFKDEAHAYEKVSRHAE
CCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFKTYQKLLGASCLALYLVGCGSGGGGESPVEMTANSKGEFQISSKADSVTIQGVKLNR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEECCCCCEEEEEEEEECC
GNCVVSFSQIYARSISAQDFKDEAHAYEKVSRHAE
CCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA